Wall clock time and date at job start Sat Mar 6 2021 19:59:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.52998 * 109.46614 * 2 1 4 4 C 1.52994 * 109.47457 * 240.00014 * 2 1 3 5 5 O 1.45200 * 109.47215 * 119.99541 * 2 1 3 6 6 C 1.34638 * 116.99928 * 60.00123 * 5 2 1 7 7 O 1.21517 * 119.99694 * 0.02562 * 6 5 2 8 8 N 1.34772 * 120.00262 * 179.97438 * 6 5 2 9 9 C 1.46494 * 120.00463 * 180.02562 * 8 6 5 10 10 C 1.52999 * 109.47391 * 180.02562 * 9 8 6 11 11 H 1.08993 * 112.90825 * 316.25137 * 10 9 8 12 12 C 1.53962 * 113.66529 * 87.55384 * 10 9 8 13 13 C 1.53782 * 87.11063 * 139.88900 * 12 10 9 14 14 H 1.09001 * 113.61250 * 220.08565 * 13 12 10 15 15 N 1.46496 * 113.68971 * 89.19569 * 13 12 10 16 16 C 1.34784 * 119.99758 * 107.45966 * 15 13 12 17 17 O 1.21552 * 120.00153 * 0.02562 * 16 15 13 18 18 C 1.47839 * 119.99861 * 179.97438 * 16 15 13 19 19 C 1.39517 * 120.55939 * 359.73235 * 18 16 15 20 20 N 1.31701 * 120.56616 * 179.76982 * 19 18 16 21 21 C 1.31923 * 121.87641 * 0.48950 * 20 19 18 22 22 C 1.38353 * 121.08250 * 359.77367 * 21 20 19 23 23 C 1.50701 * 120.34773 * 179.97438 * 22 21 20 24 24 O 1.42895 * 109.46973 * 244.97359 * 23 22 21 25 25 Si 1.86296 * 109.47303 * 4.97715 * 23 22 21 26 26 C 1.38354 * 119.30459 * 359.97277 * 22 21 20 27 27 C 1.53781 * 87.08260 * 334.63747 * 13 12 10 28 28 H 1.09003 * 109.47495 * 299.99886 * 1 2 3 29 29 H 1.09002 * 109.47212 * 60.00604 * 1 2 3 30 30 H 1.09003 * 109.46953 * 179.97438 * 1 2 3 31 31 H 1.09003 * 109.47021 * 179.97438 * 3 2 1 32 32 H 1.08998 * 109.47325 * 299.99647 * 3 2 1 33 33 H 1.08999 * 109.47521 * 59.99665 * 3 2 1 34 34 H 1.09003 * 109.47105 * 299.99988 * 4 2 1 35 35 H 1.09002 * 109.47414 * 59.99505 * 4 2 1 36 36 H 1.09003 * 109.47214 * 179.97438 * 4 2 1 37 37 H 0.97000 * 119.99857 * 0.02562 * 8 6 5 38 38 H 1.09002 * 109.47287 * 60.00002 * 9 8 6 39 39 H 1.09004 * 109.47020 * 300.00283 * 9 8 6 40 40 H 1.08997 * 113.53543 * 25.33574 * 12 10 9 41 41 H 1.08998 * 113.73879 * 254.47172 * 12 10 9 42 42 H 0.97001 * 120.00688 * 287.46664 * 15 13 12 43 43 H 1.08001 * 119.72195 * 0.02562 * 19 18 16 44 44 H 1.08001 * 119.45866 * 179.74977 * 21 20 19 45 45 H 1.09002 * 109.47070 * 124.97483 * 23 22 21 46 46 H 0.96705 * 114.00051 * 60.00572 * 24 23 22 47 47 H 1.48502 * 109.99931 * 58.68052 * 25 23 22 48 48 H 1.48500 * 110.00128 * 179.97438 * 25 23 22 49 49 H 1.07991 * 120.86064 * 180.02562 * 26 22 21 50 50 H 1.09002 * 113.61445 * 139.98212 * 27 13 12 51 51 H 1.09002 * 113.61408 * 270.79943 * 27 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0141 -0.6844 1.1856 6 6 1.6523 -1.9722 1.3385 7 8 0.9517 -2.5096 0.5036 8 7 2.0681 -2.6656 2.4168 9 6 1.6750 -4.0670 2.5828 10 6 2.2750 -4.6148 3.8793 11 1 3.3154 -4.3229 4.0218 12 6 1.3922 -4.3765 5.1179 13 6 1.7818 -5.7932 5.5719 14 1 0.9567 -6.3527 6.0128 15 7 2.9983 -5.8364 6.3870 16 6 2.9144 -6.0774 7.7104 17 8 1.8296 -6.2593 8.2276 18 6 4.1421 -6.1215 8.5329 19 6 5.3939 -5.9209 7.9503 20 7 6.4873 -5.9557 8.6837 21 6 6.4484 -6.1882 9.9817 22 6 5.2469 -6.4023 10.6333 23 6 5.2218 -6.6669 12.1167 24 8 4.7445 -7.9923 12.3561 25 14 6.9430 -6.4924 12.8079 26 6 4.0686 -6.3710 9.9089 27 6 2.0227 -6.1174 4.0881 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5137 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1299 1.4426 0.0005 32 1 1.6766 1.9563 -0.8900 33 1 1.6765 1.9564 0.8899 34 1 1.6768 -1.7489 -1.2492 35 1 1.6767 -0.2075 -2.1392 36 1 3.1301 -0.7208 -1.2494 37 1 2.6277 -2.2367 3.0829 38 1 2.0415 -4.6498 1.7377 39 1 0.5881 -4.1365 2.6281 40 1 0.3332 -4.2688 4.8834 41 1 1.7621 -3.5900 5.7756 42 1 3.8641 -5.6914 5.9743 43 1 5.4666 -5.7313 6.8896 44 1 7.3697 -6.2120 10.5448 45 1 4.5607 -5.9493 12.6027 46 1 5.2857 -8.6844 11.9520 47 1 7.4631 -5.1280 12.5373 48 1 6.9317 -6.7504 14.2702 49 1 3.1167 -6.5343 10.3920 50 1 2.9028 -6.7363 3.9137 51 1 1.1363 -6.4872 3.5724 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_13287814.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:59:55 Heat of formation + Delta-G solvation = -86.135734 kcal Electronic energy + Delta-G solvation = -31996.866112 eV Core-core repulsion = 27477.883352 eV Total energy + Delta-G solvation = -4518.982760 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.188 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.04307 -41.80203 -40.95253 -39.54162 -38.29105 -37.93500 -35.97766 -35.05382 -34.39450 -33.77943 -32.78873 -29.11557 -28.38476 -28.31715 -27.28949 -26.71395 -26.03409 -24.12122 -23.83611 -22.86372 -21.91027 -21.25400 -20.32816 -19.29949 -19.13033 -18.12270 -17.91806 -17.68057 -17.66477 -17.32538 -16.89810 -16.51125 -16.32233 -16.16076 -15.96549 -15.72536 -15.67137 -15.35054 -14.97851 -14.87953 -14.57994 -14.46851 -14.38928 -14.23594 -13.90134 -13.51854 -13.46630 -13.37170 -13.23666 -12.97607 -12.92967 -12.87885 -12.72803 -12.47332 -12.35984 -12.19374 -12.03514 -11.67208 -11.47570 -11.41324 -11.31145 -11.11640 -11.09427 -10.61494 -10.58035 -10.36750 -10.22265 -10.10372 -5.03035 -0.58907 -0.04441 1.17384 1.22134 1.61064 1.63035 1.75041 1.87745 1.97928 2.61577 3.09831 3.11397 3.37148 3.42799 3.44656 3.57870 3.64924 3.69419 3.72318 3.72884 3.77735 3.77933 3.82838 3.92924 4.09359 4.24608 4.25186 4.45058 4.47874 4.54653 4.59377 4.60571 4.70009 4.74704 4.77556 4.79741 4.81796 4.83573 4.85265 4.85953 4.93860 4.98767 5.05298 5.09631 5.14667 5.24331 5.25309 5.31210 5.35402 5.53916 5.59365 6.34054 6.38657 6.63377 6.70318 7.02193 7.33315 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.179 4.179 5 O -0.371 6.371 6 C 0.640 3.360 7 O -0.596 6.596 8 N -0.698 5.698 9 C 0.148 3.852 10 C -0.109 4.109 11 H 0.120 0.880 12 C -0.146 4.146 13 C 0.111 3.889 14 H 0.086 0.914 15 N -0.689 5.689 16 C 0.567 3.433 17 O -0.575 6.575 18 C -0.197 4.197 19 C 0.149 3.851 20 N -0.492 5.492 21 C 0.132 3.868 22 C -0.177 4.177 23 C -0.074 4.074 24 O -0.554 6.554 25 Si 0.784 3.216 26 C -0.003 4.003 27 C -0.121 4.121 28 H 0.060 0.940 29 H 0.086 0.914 30 H 0.063 0.937 31 H 0.070 0.930 32 H 0.098 0.902 33 H 0.068 0.932 34 H 0.063 0.937 35 H 0.086 0.914 36 H 0.063 0.937 37 H 0.416 0.584 38 H 0.071 0.929 39 H 0.064 0.936 40 H 0.092 0.908 41 H 0.070 0.930 42 H 0.417 0.583 43 H 0.194 0.806 44 H 0.186 0.814 45 H 0.110 0.890 46 H 0.397 0.603 47 H -0.277 1.277 48 H -0.296 1.296 49 H 0.134 0.866 50 H 0.096 0.904 51 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.613 0.084 -2.112 6.943 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.393 3.607 7 O -0.487 6.487 8 N -0.359 5.359 9 C 0.026 3.974 10 C -0.128 4.128 11 H 0.138 0.862 12 C -0.185 4.185 13 C 0.006 3.994 14 H 0.104 0.896 15 N -0.341 5.341 16 C 0.354 3.646 17 O -0.455 6.455 18 C -0.203 4.203 19 C -0.010 4.010 20 N -0.200 5.200 21 C -0.024 4.024 22 C -0.179 4.179 23 C -0.184 4.184 24 O -0.363 6.363 25 Si 0.688 3.312 26 C -0.030 4.030 27 C -0.160 4.160 28 H 0.079 0.921 29 H 0.105 0.895 30 H 0.082 0.918 31 H 0.089 0.911 32 H 0.116 0.884 33 H 0.087 0.913 34 H 0.082 0.918 35 H 0.105 0.895 36 H 0.082 0.918 37 H 0.253 0.747 38 H 0.089 0.911 39 H 0.082 0.918 40 H 0.110 0.890 41 H 0.089 0.911 42 H 0.256 0.744 43 H 0.211 0.789 44 H 0.202 0.798 45 H 0.127 0.873 46 H 0.247 0.753 47 H -0.204 1.204 48 H -0.223 1.223 49 H 0.152 0.848 50 H 0.115 0.885 51 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 6.357 0.637 -1.770 6.629 hybrid contribution -1.356 0.385 0.528 1.505 sum 5.001 1.022 -1.242 5.254 Atomic orbital electron populations 1.22476 0.94166 1.03658 1.03447 1.22339 0.94373 0.92601 0.81607 1.21890 1.02496 0.90913 1.04186 1.22468 1.01680 1.02235 0.97278 1.86307 1.71552 1.23417 1.47232 1.18408 0.78835 0.80778 0.82637 1.90911 1.42355 1.71031 1.44438 1.44741 1.55207 1.12943 1.22969 1.21426 0.99760 0.78101 0.98162 1.22878 1.00985 0.96761 0.92164 0.86190 1.23565 1.00939 0.96854 0.97092 1.21884 0.87667 0.98164 0.91708 0.89601 1.45412 1.10747 1.71347 1.06618 1.18208 0.87973 0.75722 0.82667 1.90807 1.30455 1.51135 1.73067 1.20986 0.95058 1.08963 0.95243 1.23469 0.85660 0.90491 1.01331 1.67815 1.31571 1.13453 1.07162 1.23224 0.97390 0.91063 0.90699 1.21441 0.93995 1.03979 0.98520 1.25247 1.13124 0.87541 0.92481 1.86514 1.57262 1.14630 1.77846 0.93788 0.75429 0.83319 0.78626 1.21650 0.99357 0.89465 0.92503 1.23272 1.04709 0.95253 0.92760 0.92060 0.89500 0.91802 0.91097 0.88357 0.91290 0.91763 0.89538 0.91834 0.74688 0.91060 0.91753 0.88994 0.91129 0.74430 0.78919 0.79792 0.87250 0.75277 1.20351 1.22328 0.84789 0.88522 0.87556 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.60 8.37 71.98 0.60 0.01 16 2 C 0.13 0.35 1.13 -10.80 -0.01 0.34 16 3 C -0.14 0.31 8.85 71.98 0.64 0.95 16 4 C -0.18 -0.51 8.37 71.98 0.60 0.10 16 5 O -0.37 -1.85 9.94 -55.48 -0.55 -2.40 16 6 C 0.64 3.75 8.06 129.79 1.05 4.79 16 7 O -0.60 -6.85 11.88 19.79 0.24 -6.62 16 8 N -0.70 1.06 5.56 -590.86 -3.28 -2.22 16 9 C 0.15 -0.62 5.51 86.38 0.48 -0.14 16 10 C -0.11 1.03 3.65 -10.20 -0.04 0.99 16 11 H 0.12 -1.57 8.14 -2.39 -0.02 -1.59 16 12 C -0.15 0.82 7.44 31.18 0.23 1.05 16 13 C 0.11 -0.48 4.32 45.52 0.20 -0.29 16 14 H 0.09 0.09 7.46 -2.39 -0.02 0.07 16 15 N -0.69 3.50 5.22 -442.91 -2.31 1.19 16 16 C 0.57 1.51 7.78 86.78 0.68 2.18 16 17 O -0.57 -6.96 16.02 -3.88 -0.06 -7.02 16 18 C -0.20 -0.03 5.89 -19.99 -0.12 -0.15 16 19 C 0.15 -0.62 10.71 85.02 0.91 0.29 16 20 N -0.49 0.77 10.35 -194.75 -2.01 -1.24 16 21 C 0.13 -0.44 9.84 84.71 0.83 0.40 16 22 C -0.18 0.28 5.35 -19.81 -0.11 0.17 16 23 C -0.07 0.18 2.82 71.24 0.20 0.38 16 24 O -0.55 0.49 12.84 -148.98 -1.91 -1.43 16 25 Si 0.78 -4.10 29.83 68.60 2.05 -2.06 16 26 C 0.00 -0.01 9.38 22.73 0.21 0.21 16 27 C -0.12 1.13 7.38 31.12 0.23 1.36 16 28 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 29 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 30 H 0.06 0.55 5.88 -2.39 -0.01 0.54 16 31 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 32 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 33 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 34 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 35 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 36 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 37 H 0.42 -2.50 8.58 -92.71 -0.80 -3.30 16 38 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 39 H 0.06 -0.10 7.84 -2.38 -0.02 -0.12 16 40 H 0.09 -0.39 7.90 -2.39 -0.02 -0.41 16 41 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 42 H 0.42 -5.00 6.77 -92.71 -0.63 -5.63 16 43 H 0.19 -2.35 6.42 -2.91 -0.02 -2.37 16 44 H 0.19 -1.60 4.91 -2.91 -0.01 -1.62 16 45 H 0.11 -0.09 7.96 -2.39 -0.02 -0.11 16 46 H 0.40 -3.74 8.70 -74.05 -0.64 -4.39 16 47 H -0.28 0.31 7.11 99.48 0.71 1.02 16 48 H -0.30 -0.82 7.11 99.48 0.71 -0.11 16 49 H 0.13 0.72 7.74 -2.92 -0.02 0.70 16 50 H 0.10 -1.13 8.14 -2.39 -0.02 -1.15 16 51 H 0.11 -0.98 8.10 -2.39 -0.02 -1.00 16 Total: 0.00 -27.11 414.42 -2.32 -29.43 By element: Atomic # 1 Polarization: -19.22 SS G_CDS: -1.04 Total: -20.26 kcal Atomic # 6 Polarization: 6.04 SS G_CDS: 6.58 Total: 12.63 kcal Atomic # 7 Polarization: 5.34 SS G_CDS: -7.61 Total: -2.27 kcal Atomic # 8 Polarization: -15.17 SS G_CDS: -2.29 Total: -17.46 kcal Atomic # 14 Polarization: -4.10 SS G_CDS: 2.05 Total: -2.06 kcal Total: -27.11 -2.32 -29.43 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_13287814.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.709 kcal (2) G-P(sol) polarization free energy of solvation -27.107 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.427 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.136 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds