Wall clock time and date at job start Sat Mar 6 2021 20:00:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.36420 * 125.79534 * 2 1 4 4 C 1.47378 * 127.19353 * 0.02562 * 3 2 1 5 5 O 1.21610 * 119.99989 * 359.70668 * 4 3 2 6 6 N 1.34781 * 119.99847 * 179.70733 * 4 3 2 7 7 C 1.46491 * 119.99912 * 180.02562 * 6 4 3 8 8 H 1.08997 * 112.90901 * 23.74598 * 7 6 4 9 9 C 1.53785 * 113.61523 * 155.00114 * 7 6 4 10 10 C 1.53774 * 87.08310 * 89.11309 * 9 7 6 11 11 H 1.09001 * 113.61788 * 270.80130 * 10 9 7 12 12 C 1.52999 * 113.61508 * 139.98201 * 10 9 7 13 13 N 1.46505 * 109.47189 * 175.00465 * 12 10 9 14 14 C 1.34777 * 119.99722 * 180.02562 * 13 12 10 15 15 O 1.21513 * 120.00316 * 359.97438 * 14 13 12 16 16 O 1.34638 * 119.99672 * 179.72257 * 14 13 12 17 17 C 1.45202 * 116.99776 * 180.27362 * 16 14 13 18 18 C 1.53000 * 109.46964 * 60.00058 * 17 16 14 19 19 C 1.53008 * 109.46858 * 179.97438 * 17 16 14 20 20 C 1.52994 * 109.47273 * 299.99862 * 17 16 14 21 21 C 1.53788 * 87.08409 * 25.43392 * 10 9 7 22 22 C 1.47025 * 105.61104 * 179.75369 * 3 2 1 23 23 C 1.34178 * 105.95490 * 0.22546 * 22 3 2 24 24 C 1.50702 * 125.43592 * 180.02562 * 23 22 3 25 25 O 1.42894 * 109.46997 * 65.00155 * 24 23 22 26 26 Si 1.86303 * 109.46858 * 184.99908 * 24 23 22 27 27 O 1.33647 * 125.80558 * 180.13865 * 2 1 3 28 28 H 1.09006 * 109.47437 * 90.00027 * 1 2 3 29 29 H 1.09008 * 109.46827 * 209.99653 * 1 2 3 30 30 H 1.08999 * 109.47988 * 329.99851 * 1 2 3 31 31 H 0.97000 * 119.99645 * 359.97438 * 6 4 3 32 32 H 1.09005 * 113.61057 * 334.56262 * 9 7 6 33 33 H 1.08999 * 113.61184 * 203.66176 * 9 7 6 34 34 H 1.08995 * 109.47276 * 55.00243 * 12 10 9 35 35 H 1.09001 * 109.47054 * 294.99961 * 12 10 9 36 36 H 0.97000 * 119.99795 * 359.97438 * 13 12 10 37 37 H 1.08997 * 109.47363 * 60.00315 * 18 17 16 38 38 H 1.09005 * 109.46795 * 180.02562 * 18 17 16 39 39 H 1.09001 * 109.46811 * 299.99419 * 18 17 16 40 40 H 1.08996 * 109.46984 * 60.00080 * 19 17 16 41 41 H 1.08996 * 109.46584 * 179.97438 * 19 17 16 42 42 H 1.08998 * 109.47272 * 300.00133 * 19 17 16 43 43 H 1.08995 * 109.47307 * 59.99582 * 20 17 16 44 44 H 1.08999 * 109.47211 * 180.02562 * 20 17 16 45 45 H 1.09010 * 109.46887 * 300.00170 * 20 17 16 46 46 H 1.09001 * 113.61296 * 89.11293 * 21 10 9 47 47 H 1.08997 * 113.61636 * 220.02225 * 21 10 9 48 48 H 1.07998 * 127.02357 * 180.25134 * 22 3 2 49 49 H 1.08996 * 109.47174 * 304.99969 * 24 23 22 50 50 H 0.96702 * 114.00212 * 60.00299 * 25 24 23 51 51 H 1.48506 * 109.99956 * 58.68314 * 26 24 23 52 52 H 1.48500 * 109.99710 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3049 1.1065 0.0000 4 6 1.8737 2.5158 0.0005 5 8 0.6887 2.7892 -0.0044 6 7 2.7928 3.5017 0.0064 7 6 2.3642 4.9025 0.0075 8 1 1.3596 5.0386 0.4079 9 6 3.4027 5.8640 0.6093 10 6 3.9908 5.9894 -0.8060 11 1 4.7554 5.2452 -1.0287 12 6 4.4238 7.4121 -1.1658 13 7 5.0760 7.4069 -2.4777 14 6 5.5431 8.5571 -3.0025 15 8 5.4230 9.5984 -2.3878 16 8 6.1474 8.5515 -4.2056 17 6 6.6313 9.8257 -4.7062 18 6 7.6618 10.3985 -3.7311 19 6 7.2835 9.6214 -6.0751 20 6 5.4589 10.7997 -4.8395 21 6 2.5949 5.6183 -1.3339 22 6 3.6848 0.5992 0.0061 23 6 3.5859 -0.7389 0.0040 24 6 4.7460 -1.7008 0.0091 25 8 5.4696 -1.5680 1.2341 26 14 4.1079 -3.4440 -0.1494 27 8 2.2889 -1.0839 -0.0026 28 1 -0.3634 0.0000 -1.0277 29 1 -0.3633 -0.8901 0.5138 30 1 -0.3635 0.8899 0.5138 31 1 3.7379 3.2836 0.0107 32 1 4.0767 5.3883 1.3217 33 1 2.9718 6.7913 0.9869 34 1 5.1222 7.7803 -0.4143 35 1 3.5487 8.0611 -1.1977 36 1 5.1722 6.5756 -2.9682 37 1 8.4971 9.7047 -3.6361 38 1 8.0247 11.3554 -4.1067 39 1 7.1975 10.5440 -2.7557 40 1 6.5497 9.2131 -6.7699 41 1 7.6463 10.5780 -6.4510 42 1 8.1188 8.9277 -5.9797 43 1 4.9946 10.9451 -3.8642 44 1 5.8221 11.7561 -5.2157 45 1 4.7247 10.3915 -5.5342 46 1 1.9433 6.4785 -1.4876 47 1 2.6169 4.9444 -2.1903 48 1 4.5927 1.1841 0.0116 49 1 5.4063 -1.4781 -0.8290 50 1 4.9429 -1.7520 2.0239 51 1 3.3265 -3.5867 -1.4041 52 1 5.2423 -4.4023 -0.1463 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13437852_13308374.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:00:00 Heat of formation + Delta-G solvation = -109.967291 kcal Electronic energy + Delta-G solvation = -33047.239545 eV Core-core repulsion = 28402.193230 eV Total energy + Delta-G solvation = -4645.046314 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.192 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -43.78045 -41.74059 -41.21359 -39.51242 -38.19318 -38.10966 -35.82663 -34.93133 -34.41073 -33.75286 -33.06768 -29.64673 -28.96464 -28.31498 -28.27271 -26.89152 -26.03883 -24.75879 -23.83038 -22.85615 -22.36934 -21.14356 -20.78964 -20.22162 -19.07673 -18.97412 -18.02178 -17.71795 -17.58656 -17.22015 -17.04854 -16.80540 -16.38752 -16.10929 -15.98863 -15.80512 -15.66022 -15.51189 -15.21149 -14.81181 -14.70678 -14.43515 -14.29450 -14.22534 -14.06616 -13.92793 -13.81731 -13.61754 -13.40581 -13.26023 -12.97870 -12.95530 -12.86199 -12.83333 -12.81065 -12.35270 -12.25648 -12.19569 -12.16758 -11.77075 -11.44333 -11.27054 -11.04855 -10.94196 -10.91917 -10.68127 -10.19786 -10.10347 -9.60211 -5.11160 0.26539 0.79718 1.06286 1.22475 1.37295 1.69537 1.85836 1.93047 2.07364 2.30049 3.08777 3.11009 3.28302 3.33033 3.46069 3.57721 3.64649 3.72538 3.75046 3.79463 3.84654 3.98770 4.04576 4.08237 4.17772 4.36277 4.39131 4.48662 4.51975 4.57237 4.58611 4.59994 4.60433 4.64262 4.69318 4.73252 4.79356 4.81476 4.86070 4.89778 4.91936 4.94617 5.01257 5.08458 5.09870 5.17770 5.23764 5.38014 5.46958 5.51347 5.62434 5.87830 6.29408 6.43382 6.44092 7.19154 7.45199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.097 3.903 3 C -0.255 4.255 4 C 0.596 3.404 5 O -0.536 6.536 6 N -0.708 5.708 7 C 0.121 3.879 8 H 0.108 0.892 9 C -0.134 4.134 10 C -0.127 4.127 11 H 0.098 0.902 12 C 0.147 3.853 13 N -0.711 5.711 14 C 0.649 3.351 15 O -0.567 6.567 16 O -0.366 6.366 17 C 0.137 3.863 18 C -0.184 4.184 19 C -0.142 4.142 20 C -0.184 4.184 21 C -0.147 4.147 22 C -0.149 4.149 23 C -0.056 4.056 24 C -0.027 4.027 25 O -0.531 6.531 26 Si 0.703 3.297 27 O -0.167 6.167 28 H 0.092 0.908 29 H 0.083 0.917 30 H 0.111 0.889 31 H 0.401 0.599 32 H 0.080 0.920 33 H 0.103 0.897 34 H 0.073 0.927 35 H 0.075 0.925 36 H 0.406 0.594 37 H 0.059 0.941 38 H 0.072 0.928 39 H 0.087 0.913 40 H 0.067 0.933 41 H 0.082 0.918 42 H 0.067 0.933 43 H 0.087 0.913 44 H 0.072 0.928 45 H 0.060 0.940 46 H 0.096 0.904 47 H 0.074 0.926 48 H 0.157 0.843 49 H 0.133 0.867 50 H 0.384 0.616 51 H -0.253 1.253 52 H -0.246 1.246 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.889 -2.826 0.996 3.125 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.044 3.956 3 C -0.259 4.259 4 C 0.385 3.615 5 O -0.415 6.415 6 N -0.358 5.358 7 C 0.016 3.984 8 H 0.126 0.874 9 C -0.172 4.172 10 C -0.146 4.146 11 H 0.116 0.884 12 C 0.025 3.975 13 N -0.371 5.371 14 C 0.402 3.598 15 O -0.456 6.456 16 O -0.281 6.281 17 C 0.100 3.900 18 C -0.241 4.241 19 C -0.199 4.199 20 C -0.241 4.241 21 C -0.185 4.185 22 C -0.168 4.168 23 C -0.104 4.104 24 C -0.138 4.138 25 O -0.336 6.336 26 Si 0.603 3.397 27 O -0.064 6.064 28 H 0.110 0.890 29 H 0.102 0.898 30 H 0.130 0.870 31 H 0.236 0.764 32 H 0.098 0.902 33 H 0.121 0.879 34 H 0.092 0.908 35 H 0.093 0.907 36 H 0.240 0.760 37 H 0.079 0.921 38 H 0.091 0.909 39 H 0.106 0.894 40 H 0.086 0.914 41 H 0.101 0.899 42 H 0.086 0.914 43 H 0.106 0.894 44 H 0.091 0.909 45 H 0.079 0.921 46 H 0.115 0.885 47 H 0.093 0.907 48 H 0.175 0.825 49 H 0.150 0.850 50 H 0.232 0.768 51 H -0.177 1.177 52 H -0.171 1.171 Dipole moment (debyes) X Y Z Total from point charges 0.417 -2.933 0.357 2.984 hybrid contribution 0.987 0.395 -0.582 1.212 sum 1.404 -2.538 -0.225 2.909 Atomic orbital electron populations 1.20714 0.83277 1.05533 1.04799 1.22931 0.94095 0.82836 0.95758 1.21094 0.93242 0.93724 1.17845 1.17151 0.85370 0.83655 0.75309 1.90783 1.16499 1.83947 1.50235 1.45429 1.09649 1.05105 1.75647 1.21807 0.99820 0.79797 0.96989 0.87357 1.23310 0.97992 1.00272 0.95653 1.22908 0.97625 0.96326 0.97691 0.88408 1.21380 0.97426 0.96489 0.82212 1.44720 1.62385 1.08479 1.21501 1.18118 0.77203 0.84276 0.80217 1.90922 1.61671 1.30607 1.62383 1.86303 1.70425 1.37888 1.33447 1.22112 0.94067 0.79807 0.94007 1.22521 0.98558 1.01466 1.01562 1.21878 1.01087 1.03285 0.93654 1.22521 0.97966 0.99059 1.04569 1.23561 0.96007 1.01020 0.97946 1.22569 0.96421 0.93530 1.04295 1.22615 0.82941 0.95635 1.09181 1.24419 0.90701 1.07716 0.90967 1.86560 1.39035 1.93144 1.14890 0.94172 0.82729 0.74503 0.88308 1.83676 1.16354 1.35029 1.71391 0.88988 0.89836 0.87040 0.76411 0.90175 0.87889 0.90845 0.90701 0.75960 0.92145 0.90932 0.89436 0.91416 0.89929 0.91418 0.89422 0.90934 0.92136 0.88541 0.90744 0.82512 0.84973 0.76756 1.17745 1.17055 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.06 9.89 36.00 0.36 0.41 16 2 C 0.10 0.10 7.37 -34.96 -0.26 -0.16 16 3 C -0.25 -0.32 6.31 -103.27 -0.65 -0.97 16 4 C 0.60 1.17 7.81 -12.54 -0.10 1.07 16 5 O -0.54 -2.58 14.45 5.27 0.08 -2.50 16 6 N -0.71 0.66 5.26 -54.11 -0.28 0.38 16 7 C 0.12 -0.17 4.32 -67.12 -0.29 -0.46 16 8 H 0.11 0.03 7.47 -51.93 -0.39 -0.36 16 9 C -0.13 0.44 7.39 -25.92 -0.19 0.25 16 10 C -0.13 0.42 3.63 -89.81 -0.33 0.09 16 11 H 0.10 -0.39 8.14 -51.93 -0.42 -0.82 16 12 C 0.15 -0.20 5.51 -4.04 -0.02 -0.22 16 13 N -0.71 0.09 5.56 -65.28 -0.36 -0.27 16 14 C 0.65 1.96 8.06 54.06 0.44 2.40 16 15 O -0.57 -3.07 11.88 -19.28 -0.23 -3.30 16 16 O -0.37 -1.00 9.94 -40.32 -0.40 -1.40 16 17 C 0.14 0.22 1.13 -90.62 -0.10 0.12 16 18 C -0.18 -0.29 8.37 37.16 0.31 0.02 16 19 C -0.14 0.06 8.85 37.16 0.33 0.39 16 20 C -0.18 -0.30 8.37 37.15 0.31 0.01 16 21 C -0.15 0.31 7.43 -25.91 -0.19 0.11 16 22 C -0.15 0.04 10.48 -37.45 -0.39 -0.35 16 23 C -0.06 0.01 6.18 -35.74 -0.22 -0.21 16 24 C -0.03 0.04 2.97 36.01 0.11 0.15 16 25 O -0.53 0.78 12.88 -35.23 -0.45 0.32 16 26 Si 0.70 -1.15 32.09 -169.99 -5.46 -6.61 16 27 O -0.17 -0.10 8.90 7.67 0.07 -0.03 16 28 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 30 H 0.11 0.06 6.49 -51.93 -0.34 -0.28 16 31 H 0.40 -1.20 7.87 -40.82 -0.32 -1.52 16 32 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.10 -0.38 8.10 -51.93 -0.42 -0.80 16 34 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.07 -0.05 7.84 -51.93 -0.41 -0.45 16 36 H 0.41 -0.80 8.58 -40.82 -0.35 -1.15 16 37 H 0.06 0.08 8.14 -51.93 -0.42 -0.35 16 38 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 39 H 0.09 0.32 5.88 -51.93 -0.31 0.02 16 40 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 41 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 42 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 43 H 0.09 0.33 5.88 -51.93 -0.31 0.02 16 44 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 45 H 0.06 0.08 8.14 -51.92 -0.42 -0.34 16 46 H 0.10 -0.19 7.90 -51.93 -0.41 -0.60 16 47 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 48 H 0.16 -0.36 7.74 -52.49 -0.41 -0.76 16 49 H 0.13 -0.27 7.96 -51.93 -0.41 -0.68 16 50 H 0.38 -1.95 8.70 45.56 0.40 -1.55 16 51 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 52 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 LS Contribution 425.52 15.07 6.41 6.41 Total: 0.00 -8.99 425.52 -9.89 -18.87 By element: Atomic # 1 Polarization: -6.17 SS G_CDS: -8.36 Total: -14.54 kcal Atomic # 6 Polarization: 3.55 SS G_CDS: -0.90 Total: 2.66 kcal Atomic # 7 Polarization: 0.75 SS G_CDS: -0.65 Total: 0.10 kcal Atomic # 8 Polarization: -5.96 SS G_CDS: -0.94 Total: -6.90 kcal Atomic # 14 Polarization: -1.15 SS G_CDS: -5.46 Total: -6.61 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -8.99 -9.89 -18.87 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_13308374.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.093 kcal (2) G-P(sol) polarization free energy of solvation -8.987 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.079 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.888 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.874 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.967 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds