Wall clock time and date at job start Sat Mar 6 2021 19:59:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.36420 * 125.79534 * 2 1 4 4 C 1.47378 * 127.19353 * 0.02562 * 3 2 1 5 5 O 1.21610 * 119.99989 * 359.70668 * 4 3 2 6 6 N 1.34781 * 119.99847 * 179.70733 * 4 3 2 7 7 C 1.46491 * 119.99912 * 180.02562 * 6 4 3 8 8 H 1.08997 * 112.90901 * 23.74598 * 7 6 4 9 9 C 1.53785 * 113.61523 * 155.00114 * 7 6 4 10 10 C 1.53774 * 87.08310 * 89.11309 * 9 7 6 11 11 H 1.09001 * 113.61788 * 270.80130 * 10 9 7 12 12 C 1.52999 * 113.61508 * 139.98201 * 10 9 7 13 13 N 1.46505 * 109.47189 * 175.00465 * 12 10 9 14 14 C 1.34777 * 119.99722 * 180.02562 * 13 12 10 15 15 O 1.21513 * 120.00316 * 359.97438 * 14 13 12 16 16 O 1.34638 * 119.99672 * 179.72257 * 14 13 12 17 17 C 1.45202 * 116.99776 * 180.27362 * 16 14 13 18 18 C 1.53000 * 109.46964 * 60.00058 * 17 16 14 19 19 C 1.53008 * 109.46858 * 179.97438 * 17 16 14 20 20 C 1.52994 * 109.47273 * 299.99862 * 17 16 14 21 21 C 1.53788 * 87.08409 * 25.43392 * 10 9 7 22 22 C 1.47025 * 105.61104 * 179.75369 * 3 2 1 23 23 C 1.34178 * 105.95490 * 0.22546 * 22 3 2 24 24 C 1.50702 * 125.43592 * 180.02562 * 23 22 3 25 25 O 1.42894 * 109.46997 * 65.00155 * 24 23 22 26 26 Si 1.86303 * 109.46858 * 184.99908 * 24 23 22 27 27 O 1.33647 * 125.80558 * 180.13865 * 2 1 3 28 28 H 1.09006 * 109.47437 * 90.00027 * 1 2 3 29 29 H 1.09008 * 109.46827 * 209.99653 * 1 2 3 30 30 H 1.08999 * 109.47988 * 329.99851 * 1 2 3 31 31 H 0.97000 * 119.99645 * 359.97438 * 6 4 3 32 32 H 1.09005 * 113.61057 * 334.56262 * 9 7 6 33 33 H 1.08999 * 113.61184 * 203.66176 * 9 7 6 34 34 H 1.08995 * 109.47276 * 55.00243 * 12 10 9 35 35 H 1.09001 * 109.47054 * 294.99961 * 12 10 9 36 36 H 0.97000 * 119.99795 * 359.97438 * 13 12 10 37 37 H 1.08997 * 109.47363 * 60.00315 * 18 17 16 38 38 H 1.09005 * 109.46795 * 180.02562 * 18 17 16 39 39 H 1.09001 * 109.46811 * 299.99419 * 18 17 16 40 40 H 1.08996 * 109.46984 * 60.00080 * 19 17 16 41 41 H 1.08996 * 109.46584 * 179.97438 * 19 17 16 42 42 H 1.08998 * 109.47272 * 300.00133 * 19 17 16 43 43 H 1.08995 * 109.47307 * 59.99582 * 20 17 16 44 44 H 1.08999 * 109.47211 * 180.02562 * 20 17 16 45 45 H 1.09010 * 109.46887 * 300.00170 * 20 17 16 46 46 H 1.09001 * 113.61296 * 89.11293 * 21 10 9 47 47 H 1.08997 * 113.61636 * 220.02225 * 21 10 9 48 48 H 1.07998 * 127.02357 * 180.25134 * 22 3 2 49 49 H 1.08996 * 109.47174 * 304.99969 * 24 23 22 50 50 H 0.96702 * 114.00212 * 60.00299 * 25 24 23 51 51 H 1.48506 * 109.99956 * 58.68314 * 26 24 23 52 52 H 1.48500 * 109.99710 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3049 1.1065 0.0000 4 6 1.8737 2.5158 0.0005 5 8 0.6887 2.7892 -0.0044 6 7 2.7928 3.5017 0.0064 7 6 2.3642 4.9025 0.0075 8 1 1.3596 5.0386 0.4079 9 6 3.4027 5.8640 0.6093 10 6 3.9908 5.9894 -0.8060 11 1 4.7554 5.2452 -1.0287 12 6 4.4238 7.4121 -1.1658 13 7 5.0760 7.4069 -2.4777 14 6 5.5431 8.5571 -3.0025 15 8 5.4230 9.5984 -2.3878 16 8 6.1474 8.5515 -4.2056 17 6 6.6313 9.8257 -4.7062 18 6 7.6618 10.3985 -3.7311 19 6 7.2835 9.6214 -6.0751 20 6 5.4589 10.7997 -4.8395 21 6 2.5949 5.6183 -1.3339 22 6 3.6848 0.5992 0.0061 23 6 3.5859 -0.7389 0.0040 24 6 4.7460 -1.7008 0.0091 25 8 5.4696 -1.5680 1.2341 26 14 4.1079 -3.4440 -0.1494 27 8 2.2889 -1.0839 -0.0026 28 1 -0.3634 0.0000 -1.0277 29 1 -0.3633 -0.8901 0.5138 30 1 -0.3635 0.8899 0.5138 31 1 3.7379 3.2836 0.0107 32 1 4.0767 5.3883 1.3217 33 1 2.9718 6.7913 0.9869 34 1 5.1222 7.7803 -0.4143 35 1 3.5487 8.0611 -1.1977 36 1 5.1722 6.5756 -2.9682 37 1 8.4971 9.7047 -3.6361 38 1 8.0247 11.3554 -4.1067 39 1 7.1975 10.5440 -2.7557 40 1 6.5497 9.2131 -6.7699 41 1 7.6463 10.5780 -6.4510 42 1 8.1188 8.9277 -5.9797 43 1 4.9946 10.9451 -3.8642 44 1 5.8221 11.7561 -5.2157 45 1 4.7247 10.3915 -5.5342 46 1 1.9433 6.4785 -1.4876 47 1 2.6169 4.9444 -2.1903 48 1 4.5927 1.1841 0.0116 49 1 5.4063 -1.4781 -0.8290 50 1 4.9429 -1.7520 2.0239 51 1 3.3265 -3.5867 -1.4041 52 1 5.2423 -4.4023 -0.1463 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_13308374.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:59:59 Heat of formation + Delta-G solvation = -110.448491 kcal Electronic energy + Delta-G solvation = -33047.260411 eV Core-core repulsion = 28402.193230 eV Total energy + Delta-G solvation = -4645.067181 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.192 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.77267 -41.86750 -41.21343 -39.55920 -38.30018 -37.98579 -35.96667 -35.02209 -34.46409 -33.73968 -33.02610 -29.59472 -28.92377 -28.39406 -28.32767 -26.72113 -26.00926 -24.73701 -23.83469 -22.89773 -22.33800 -21.24314 -20.81514 -20.16191 -19.15019 -18.93453 -17.98979 -17.73578 -17.65756 -17.34178 -17.01226 -16.77476 -16.40811 -16.10670 -15.95168 -15.77762 -15.66474 -15.58348 -15.25812 -14.82040 -14.74990 -14.49836 -14.28264 -14.24183 -14.00669 -13.84975 -13.77300 -13.46629 -13.38283 -13.23998 -12.97574 -12.94049 -12.89114 -12.87520 -12.76526 -12.48257 -12.37084 -12.25728 -12.02394 -11.66257 -11.42563 -11.31898 -11.16544 -11.12720 -10.93812 -10.60361 -10.24484 -10.10807 -9.58662 -5.00557 0.22092 0.82649 1.15705 1.17224 1.40627 1.73233 1.74918 1.90987 2.10242 2.22214 3.09829 3.22206 3.42861 3.48042 3.57434 3.68964 3.71808 3.74083 3.76919 3.77363 3.84896 3.91867 4.10944 4.22650 4.31531 4.45148 4.46707 4.53113 4.58537 4.58887 4.59686 4.64626 4.70072 4.73704 4.76041 4.77939 4.80627 4.83829 4.84919 4.88405 4.97557 5.04574 5.08760 5.12443 5.17780 5.21715 5.24427 5.24851 5.34436 5.55980 5.59663 5.89596 6.36479 6.46934 6.62538 7.14998 7.31282 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.086 3.914 3 C -0.269 4.269 4 C 0.591 3.409 5 O -0.573 6.573 6 N -0.694 5.694 7 C 0.114 3.886 8 H 0.088 0.912 9 C -0.122 4.122 10 C -0.109 4.109 11 H 0.114 0.886 12 C 0.148 3.852 13 N -0.699 5.699 14 C 0.641 3.359 15 O -0.596 6.596 16 O -0.371 6.371 17 C 0.127 3.873 18 C -0.180 4.180 19 C -0.138 4.138 20 C -0.180 4.180 21 C -0.145 4.145 22 C -0.147 4.147 23 C -0.061 4.061 24 C -0.022 4.022 25 O -0.540 6.540 26 Si 0.773 3.227 27 O -0.171 6.171 28 H 0.095 0.905 29 H 0.102 0.898 30 H 0.098 0.902 31 H 0.413 0.587 32 H 0.091 0.909 33 H 0.108 0.892 34 H 0.070 0.930 35 H 0.066 0.934 36 H 0.416 0.584 37 H 0.062 0.938 38 H 0.087 0.913 39 H 0.063 0.937 40 H 0.068 0.932 41 H 0.098 0.902 42 H 0.069 0.931 43 H 0.063 0.937 44 H 0.087 0.913 45 H 0.061 0.939 46 H 0.094 0.906 47 H 0.067 0.933 48 H 0.178 0.822 49 H 0.140 0.860 50 H 0.400 0.600 51 H -0.296 1.296 52 H -0.280 1.280 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.221 -3.023 0.967 3.874 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.032 3.968 3 C -0.274 4.274 4 C 0.381 3.619 5 O -0.455 6.455 6 N -0.345 5.345 7 C 0.008 3.992 8 H 0.107 0.893 9 C -0.161 4.161 10 C -0.128 4.128 11 H 0.132 0.868 12 C 0.026 3.974 13 N -0.359 5.359 14 C 0.394 3.606 15 O -0.487 6.487 16 O -0.286 6.286 17 C 0.091 3.909 18 C -0.237 4.237 19 C -0.195 4.195 20 C -0.237 4.237 21 C -0.183 4.183 22 C -0.166 4.166 23 C -0.109 4.109 24 C -0.132 4.132 25 O -0.348 6.348 26 Si 0.678 3.322 27 O -0.068 6.068 28 H 0.113 0.887 29 H 0.120 0.880 30 H 0.116 0.884 31 H 0.250 0.750 32 H 0.109 0.891 33 H 0.126 0.874 34 H 0.088 0.912 35 H 0.085 0.915 36 H 0.252 0.748 37 H 0.081 0.919 38 H 0.105 0.895 39 H 0.082 0.918 40 H 0.087 0.913 41 H 0.117 0.883 42 H 0.089 0.911 43 H 0.082 0.918 44 H 0.106 0.894 45 H 0.080 0.920 46 H 0.112 0.888 47 H 0.086 0.914 48 H 0.195 0.805 49 H 0.157 0.843 50 H 0.251 0.749 51 H -0.223 1.223 52 H -0.206 1.206 Dipole moment (debyes) X Y Z Total from point charges 1.776 -3.139 0.351 3.623 hybrid contribution 0.566 0.438 -0.590 0.928 sum 2.342 -2.700 -0.239 3.582 Atomic orbital electron populations 1.20713 0.82634 1.05754 1.05051 1.23229 0.94773 0.83038 0.95739 1.21201 0.94248 0.93432 1.18496 1.17355 0.85201 0.84395 0.74994 1.90762 1.18007 1.84501 1.52191 1.45335 1.09917 1.04835 1.74364 1.21849 0.99597 0.79877 0.97837 0.89347 1.23273 0.97236 0.99851 0.95735 1.22817 0.97164 0.95412 0.97415 0.86802 1.21426 0.96879 0.97516 0.81553 1.44755 1.61387 1.08065 1.21725 1.18393 0.77298 0.84659 0.80254 1.90909 1.62857 1.31816 1.63088 1.86309 1.70393 1.38564 1.33289 1.22351 0.94065 0.79518 0.95014 1.22471 0.98413 1.02347 1.00447 1.21892 1.01000 1.04325 0.92265 1.22474 0.98056 0.99975 1.03230 1.23529 0.96830 1.00682 0.97281 1.22799 0.96387 0.93639 1.03767 1.22908 0.82865 0.96065 1.09023 1.24430 0.90337 1.07005 0.91465 1.86533 1.39645 1.93109 1.15498 0.93277 0.79759 0.73056 0.86077 1.83672 1.16768 1.34967 1.71420 0.88690 0.87960 0.88397 0.74981 0.89062 0.87378 0.91162 0.91539 0.74765 0.91891 0.89465 0.91780 0.91272 0.88298 0.91147 0.91788 0.89439 0.92038 0.88767 0.91392 0.80456 0.84270 0.74940 1.22344 1.20638 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.04 9.89 71.24 0.70 0.74 16 2 C 0.09 0.22 7.37 25.26 0.19 0.40 16 3 C -0.27 -0.73 6.31 -18.99 -0.12 -0.85 16 4 C 0.59 2.75 7.81 86.65 0.68 3.43 16 5 O -0.57 -6.48 14.45 -4.06 -0.06 -6.54 16 6 N -0.69 1.37 5.26 -443.34 -2.33 -0.96 16 7 C 0.11 -0.29 4.32 45.52 0.20 -0.09 16 8 H 0.09 0.18 7.47 -2.39 -0.02 0.16 16 9 C -0.12 0.89 7.39 31.12 0.23 1.12 16 10 C -0.11 0.81 3.63 -10.27 -0.04 0.77 16 11 H 0.11 -1.14 8.14 -2.39 -0.02 -1.16 16 12 C 0.15 -0.42 5.51 86.38 0.48 0.06 16 13 N -0.70 0.18 5.56 -590.84 -3.29 -3.10 16 14 C 0.64 4.31 8.06 129.79 1.05 5.36 16 15 O -0.60 -7.27 11.88 19.80 0.24 -7.03 16 16 O -0.37 -2.13 9.94 -55.47 -0.55 -2.69 16 17 C 0.13 0.41 1.13 -10.79 -0.01 0.40 16 18 C -0.18 -0.60 8.37 71.98 0.60 0.00 16 19 C -0.14 0.25 8.85 71.98 0.64 0.88 16 20 C -0.18 -0.67 8.37 71.98 0.60 -0.06 16 21 C -0.14 0.58 7.43 31.13 0.23 0.82 16 22 C -0.15 0.20 10.48 23.65 0.25 0.45 16 23 C -0.06 0.07 6.18 24.76 0.15 0.22 16 24 C -0.02 0.09 2.97 71.24 0.21 0.30 16 25 O -0.54 2.36 12.88 -148.98 -1.92 0.44 16 26 Si 0.77 -2.47 32.09 68.60 2.20 -0.27 16 27 O -0.17 -0.19 8.90 4.52 0.04 -0.15 16 28 H 0.09 -0.13 8.14 -2.38 -0.02 -0.14 16 29 H 0.10 -0.49 8.14 -2.38 -0.02 -0.51 16 30 H 0.10 0.26 6.49 -2.39 -0.02 0.25 16 31 H 0.41 -2.93 7.87 -92.71 -0.73 -3.66 16 32 H 0.09 -0.80 8.14 -2.38 -0.02 -0.82 16 33 H 0.11 -0.85 8.10 -2.39 -0.02 -0.87 16 34 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 35 H 0.07 -0.04 7.84 -2.39 -0.02 -0.06 16 36 H 0.42 -1.88 8.58 -92.71 -0.80 -2.67 16 37 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 38 H 0.09 -0.01 8.14 -2.38 -0.02 -0.03 16 39 H 0.06 0.55 5.88 -2.39 -0.01 0.54 16 40 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 41 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 42 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 43 H 0.06 0.58 5.88 -2.39 -0.01 0.56 16 44 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 45 H 0.06 0.19 8.14 -2.38 -0.02 0.17 16 46 H 0.09 -0.32 7.90 -2.39 -0.02 -0.34 16 47 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 48 H 0.18 -1.14 7.74 -2.91 -0.02 -1.17 16 49 H 0.14 -0.73 7.96 -2.39 -0.02 -0.75 16 50 H 0.40 -4.65 8.70 -74.06 -0.64 -5.29 16 51 H -0.30 -1.20 7.11 99.48 0.71 -0.49 16 52 H -0.28 -0.66 7.11 99.48 0.71 0.05 16 Total: 0.00 -22.78 425.52 -0.80 -23.59 By element: Atomic # 1 Polarization: -16.07 SS G_CDS: -1.17 Total: -17.24 kcal Atomic # 6 Polarization: 7.92 SS G_CDS: 6.03 Total: 13.95 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -5.62 Total: -4.06 kcal Atomic # 8 Polarization: -13.71 SS G_CDS: -2.25 Total: -15.97 kcal Atomic # 14 Polarization: -2.47 SS G_CDS: 2.20 Total: -0.27 kcal Total: -22.78 -0.80 -23.59 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_13308374.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.860 kcal (2) G-P(sol) polarization free energy of solvation -22.785 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.645 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.804 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.588 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds