Wall clock time and date at job start Sat Mar 6 2021 20:00:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52999 * 109.46626 * 2 1 4 4 C 1.52997 * 109.47164 * 120.00297 * 2 1 3 5 5 O 1.45202 * 109.46867 * 240.00586 * 2 1 3 6 6 C 1.34628 * 117.00407 * 59.99955 * 5 2 1 7 7 O 1.21513 * 120.00136 * 359.97438 * 6 5 2 8 8 N 1.34780 * 120.00286 * 179.97438 * 6 5 2 9 9 C 1.46494 * 120.00166 * 179.97438 * 8 6 5 10 10 C 1.52997 * 109.47154 * 179.97438 * 9 8 6 11 11 H 1.09004 * 112.84854 * 43.81158 * 10 9 8 12 12 C 1.53780 * 113.61624 * 175.00074 * 10 9 8 13 13 C 1.53774 * 87.08190 * 139.98510 * 12 10 9 14 14 H 1.08999 * 113.61587 * 219.93175 * 13 12 10 15 15 N 1.46505 * 113.61544 * 89.11975 * 13 12 10 16 16 C 1.34773 * 119.99912 * 155.00172 * 15 13 12 17 17 O 1.21583 * 120.00561 * 359.97438 * 16 15 13 18 18 C 1.47538 * 120.00064 * 179.97438 * 16 15 13 19 19 C 1.40129 * 120.19583 * 179.72233 * 18 16 15 20 20 O 1.35648 * 120.15052 * 359.97438 * 19 18 16 21 21 C 1.38711 * 119.70141 * 179.74583 * 19 18 16 22 22 C 1.38058 * 120.08323 * 0.53431 * 21 19 18 23 23 C 1.50700 * 119.80654 * 179.76401 * 22 21 19 24 24 O 1.42901 * 109.47068 * 64.97118 * 23 22 21 25 25 Si 1.86294 * 109.47298 * 184.97615 * 23 22 21 26 26 C 1.38550 * 120.38694 * 359.73807 * 22 21 19 27 27 C 1.37779 * 120.30455 * 359.97438 * 26 22 21 28 28 C 1.53773 * 113.62024 * 272.50118 * 10 9 8 29 29 H 1.09001 * 109.46801 * 59.99811 * 1 2 3 30 30 H 1.09001 * 109.46998 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47050 * 299.99699 * 1 2 3 32 32 H 1.09000 * 109.47160 * 60.00369 * 3 2 1 33 33 H 1.09002 * 109.46719 * 180.02562 * 3 2 1 34 34 H 1.08993 * 109.47839 * 299.99931 * 3 2 1 35 35 H 1.09001 * 109.47375 * 59.99966 * 4 2 1 36 36 H 1.09002 * 109.46777 * 180.02562 * 4 2 1 37 37 H 1.09000 * 109.47140 * 299.99948 * 4 2 1 38 38 H 0.97000 * 119.99457 * 359.97438 * 8 6 5 39 39 H 1.08995 * 109.47699 * 299.99830 * 9 8 6 40 40 H 1.08999 * 109.47206 * 60.00085 * 9 8 6 41 41 H 1.09003 * 113.61591 * 254.53485 * 12 10 9 42 42 H 1.08998 * 113.61442 * 25.34982 * 12 10 9 43 43 H 0.96997 * 119.99794 * 334.99337 * 15 13 12 44 44 H 0.96702 * 114.00326 * 89.99927 * 20 19 18 45 45 H 1.08001 * 119.96111 * 180.29166 * 21 19 18 46 46 H 1.09008 * 109.46727 * 304.97783 * 23 22 21 47 47 H 0.96699 * 113.99801 * 179.97438 * 24 23 22 48 48 H 1.48503 * 109.99922 * 299.99825 * 25 23 22 49 49 H 1.48496 * 110.00166 * 61.31785 * 25 23 22 50 50 H 1.08008 * 119.84463 * 180.02562 * 26 22 21 51 51 H 1.07999 * 120.04869 * 180.02562 * 27 26 22 52 52 H 1.09004 * 113.61373 * 334.56234 * 28 10 9 53 53 H 1.08997 * 113.61780 * 105.46732 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7213 1.2492 5 8 2.0140 -0.6844 -1.1857 6 6 1.6523 -0.1727 -2.3772 7 8 0.9509 0.8184 -2.4252 8 7 2.0681 -0.7598 -3.5170 9 6 1.6740 -0.2034 -4.8136 10 6 2.2752 -1.0512 -5.9364 11 1 2.1817 -2.1219 -5.7547 12 6 1.8216 -0.6231 -7.3420 13 6 3.2668 -0.8790 -7.8007 14 1 3.6387 -0.1367 -8.5070 15 7 3.5075 -2.2550 -8.2422 16 6 4.5035 -2.5195 -9.1108 17 8 5.2020 -1.6162 -9.5283 18 6 4.7463 -3.9053 -9.5550 19 6 5.7770 -4.1842 -10.4625 20 8 6.5566 -3.1809 -10.9375 21 6 5.9996 -5.4915 -10.8692 22 6 5.2014 -6.5109 -10.3898 23 6 5.4453 -7.9282 -10.8399 24 8 6.7249 -8.3622 -10.3746 25 14 4.1216 -9.0380 -10.1423 26 6 4.1776 -6.2384 -9.4968 27 6 3.9461 -4.9465 -9.0776 28 6 3.6917 -0.6154 -6.3464 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 1.6766 1.9563 0.8900 33 1 3.1300 1.4425 -0.0005 34 1 1.6767 1.9564 -0.8899 35 1 1.6767 -1.7490 1.2492 36 1 3.1301 -0.7209 1.2493 37 1 1.6767 -0.2075 2.1392 38 1 2.6282 -1.5508 -3.4787 39 1 0.5872 -0.2086 -4.8961 40 1 2.0397 0.8201 -4.8960 41 1 1.0946 -1.2998 -7.7912 42 1 1.5210 0.4228 -7.4041 43 1 2.9501 -2.9756 -7.9093 44 1 7.3432 -3.0070 -10.4025 45 1 6.7959 -5.7119 -11.5648 46 1 5.4204 -7.9730 -11.9288 47 1 6.9489 -9.2682 -10.6278 48 1 4.1452 -8.9858 -8.6583 49 1 2.7890 -8.6166 -10.6442 50 1 3.5587 -7.0426 -9.1270 51 1 3.1473 -4.7389 -8.3812 52 1 3.9039 0.4330 -6.1368 53 1 4.4746 -1.2858 -5.9920 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_13422076.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:00:08 Heat of formation + Delta-G solvation = -135.466505 kcal Electronic energy + Delta-G solvation = -34434.012082 eV Core-core repulsion = 29659.633898 eV Total energy + Delta-G solvation = -4774.378184 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.192 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -41.97172 -41.77379 -40.77350 -39.40886 -38.46197 -38.22700 -37.22979 -35.97495 -35.03371 -34.34200 -32.69946 -31.26062 -29.18489 -28.40136 -28.33333 -27.48469 -26.75353 -24.55497 -23.99136 -23.45198 -22.87320 -21.88934 -21.26363 -20.34344 -19.39231 -19.16742 -18.82801 -18.42990 -17.74086 -17.66356 -17.35369 -16.84822 -16.70446 -16.46766 -16.30665 -16.08935 -15.82475 -15.69746 -15.55382 -15.33500 -15.19168 -14.83823 -14.65291 -14.49423 -14.18457 -14.05042 -13.92249 -13.56686 -13.41855 -13.38691 -13.24787 -13.01239 -12.98911 -12.94817 -12.89751 -12.49896 -12.48995 -12.37949 -12.14300 -12.05685 -11.87019 -11.68600 -11.43378 -11.34943 -11.14132 -11.01263 -10.45719 -10.27770 -10.21324 -10.08429 -9.90501 -4.90393 -0.54259 -0.00664 1.14459 1.28014 1.56539 1.69905 1.72271 1.92065 1.95913 2.42392 3.02396 3.08353 3.25188 3.39038 3.46026 3.54151 3.60449 3.69506 3.71266 3.73694 3.76215 3.80204 3.91245 4.01067 4.12400 4.20357 4.24629 4.43663 4.50143 4.54544 4.57379 4.58094 4.63306 4.68016 4.73047 4.74274 4.77933 4.79476 4.82651 4.83393 4.84390 4.95316 5.00616 5.01597 5.07636 5.10596 5.12468 5.22585 5.23720 5.33052 5.43840 5.52375 5.56769 6.35476 6.37016 6.62227 6.86785 7.07033 7.30399 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.180 4.180 4 C -0.138 4.138 5 O -0.371 6.371 6 C 0.641 3.359 7 O -0.596 6.596 8 N -0.699 5.699 9 C 0.148 3.852 10 C -0.109 4.109 11 H 0.117 0.883 12 C -0.123 4.123 13 C 0.112 3.888 14 H 0.084 0.916 15 N -0.695 5.695 16 C 0.560 3.440 17 O -0.559 6.559 18 C -0.181 4.181 19 C 0.159 3.841 20 O -0.494 6.494 21 C -0.136 4.136 22 C -0.040 4.040 23 C -0.091 4.091 24 O -0.563 6.563 25 Si 0.777 3.223 26 C -0.154 4.154 27 C -0.052 4.052 28 C -0.143 4.143 29 H 0.063 0.937 30 H 0.062 0.938 31 H 0.086 0.914 32 H 0.087 0.913 33 H 0.061 0.939 34 H 0.063 0.937 35 H 0.070 0.930 36 H 0.068 0.932 37 H 0.098 0.902 38 H 0.416 0.584 39 H 0.071 0.929 40 H 0.065 0.935 41 H 0.092 0.908 42 H 0.107 0.893 43 H 0.413 0.587 44 H 0.409 0.591 45 H 0.145 0.855 46 H 0.096 0.904 47 H 0.406 0.594 48 H -0.286 1.286 49 H -0.283 1.283 50 H 0.137 0.863 51 H 0.167 0.833 52 H 0.093 0.907 53 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.313 -9.009 1.476 9.223 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.238 4.238 4 C -0.195 4.195 5 O -0.285 6.285 6 C 0.394 3.606 7 O -0.487 6.487 8 N -0.359 5.359 9 C 0.026 3.974 10 C -0.127 4.127 11 H 0.135 0.865 12 C -0.161 4.161 13 C 0.006 3.994 14 H 0.103 0.897 15 N -0.348 5.348 16 C 0.348 3.652 17 O -0.438 6.438 18 C -0.185 4.185 19 C 0.113 3.887 20 O -0.307 6.307 21 C -0.155 4.155 22 C -0.041 4.041 23 C -0.200 4.200 24 O -0.373 6.373 25 Si 0.682 3.318 26 C -0.171 4.171 27 C -0.071 4.071 28 C -0.182 4.182 29 H 0.082 0.918 30 H 0.081 0.919 31 H 0.105 0.895 32 H 0.106 0.894 33 H 0.080 0.920 34 H 0.082 0.918 35 H 0.089 0.911 36 H 0.087 0.913 37 H 0.117 0.883 38 H 0.253 0.747 39 H 0.089 0.911 40 H 0.084 0.916 41 H 0.111 0.889 42 H 0.125 0.875 43 H 0.252 0.748 44 H 0.269 0.731 45 H 0.163 0.837 46 H 0.114 0.886 47 H 0.257 0.743 48 H -0.213 1.213 49 H -0.210 1.210 50 H 0.155 0.845 51 H 0.184 0.816 52 H 0.112 0.888 53 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -2.284 -7.267 1.526 7.769 hybrid contribution 0.681 0.303 0.212 0.775 sum -1.603 -6.964 1.738 7.354 Atomic orbital electron populations 1.22472 0.93968 1.02959 1.04279 1.22352 0.94518 0.92438 0.81629 1.22475 1.01587 0.95415 1.04276 1.21892 1.02416 1.01275 0.93893 1.86305 1.71578 1.56632 1.13996 1.18393 0.78831 0.81532 0.81851 1.90911 1.42360 1.27985 1.87444 1.44740 1.55150 1.33103 1.02915 1.21413 1.00039 0.97221 0.78705 1.22824 0.95707 1.00976 0.93225 0.86482 1.23278 0.94960 1.04250 0.93659 1.21864 0.98048 0.83383 0.96068 0.89747 1.45445 1.33809 1.09955 1.45577 1.18188 0.80515 0.87932 0.78515 1.90812 1.48379 1.47539 1.57069 1.20441 1.01708 0.93896 1.02427 1.18744 0.91440 0.87385 0.91171 1.84706 1.40134 1.52335 1.53533 1.21416 1.01282 0.90450 1.02326 1.19848 0.94167 0.95218 0.94853 1.25022 0.95791 0.95517 1.03648 1.86435 1.33906 1.37442 1.79529 0.93993 0.73765 0.86711 0.77368 1.21065 0.99338 0.97536 0.99161 1.21392 0.97553 0.90712 0.97397 1.23518 0.96968 1.02731 0.94995 0.91801 0.91864 0.89469 0.89438 0.92034 0.91830 0.91113 0.91258 0.88306 0.74716 0.91110 0.91625 0.88928 0.87453 0.74834 0.73054 0.83699 0.88624 0.74257 1.21311 1.21033 0.84547 0.81602 0.88829 0.91137 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.58 8.37 71.98 0.60 0.02 16 2 C 0.13 0.40 1.13 -10.79 -0.01 0.39 16 3 C -0.18 -0.66 8.37 71.98 0.60 -0.06 16 4 C -0.14 0.27 8.85 71.98 0.64 0.90 16 5 O -0.37 -2.06 9.94 -55.38 -0.55 -2.61 16 6 C 0.64 4.21 8.06 129.79 1.05 5.25 16 7 O -0.60 -7.25 11.88 19.80 0.24 -7.01 16 8 N -0.70 0.38 5.56 -590.88 -3.29 -2.90 16 9 C 0.15 -0.44 5.51 86.38 0.48 0.04 16 10 C -0.11 0.83 3.63 -10.27 -0.04 0.79 16 11 H 0.12 -1.28 8.14 -2.38 -0.02 -1.30 16 12 C -0.12 0.87 7.39 31.12 0.23 1.10 16 13 C 0.11 -0.21 4.32 45.51 0.20 -0.02 16 14 H 0.08 0.30 7.46 -2.39 -0.02 0.29 16 15 N -0.70 1.21 5.21 -443.22 -2.31 -1.10 16 16 C 0.56 3.49 7.76 86.70 0.67 4.16 16 17 O -0.56 -8.11 14.76 16.94 0.25 -7.86 16 18 C -0.18 -0.80 5.89 -20.01 -0.12 -0.91 16 19 C 0.16 1.06 6.72 22.84 0.15 1.22 16 20 O -0.49 -4.20 11.58 -68.71 -0.80 -4.99 16 21 C -0.14 -0.57 9.60 22.34 0.21 -0.36 16 22 C -0.04 -0.08 5.39 -19.83 -0.11 -0.19 16 23 C -0.09 0.30 2.78 71.24 0.20 0.50 16 24 O -0.56 1.60 12.81 -148.98 -1.91 -0.30 16 25 Si 0.78 -4.54 29.83 68.60 2.05 -2.50 16 26 C -0.15 -0.08 8.64 22.24 0.19 0.11 16 27 C -0.05 0.06 9.54 22.52 0.21 0.27 16 28 C -0.14 0.57 7.43 31.12 0.23 0.80 16 29 H 0.06 0.55 5.88 -2.39 -0.01 0.53 16 30 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 31 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 32 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 33 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 34 H 0.06 0.57 5.88 -2.39 -0.01 0.56 16 35 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 36 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 37 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 38 H 0.42 -2.07 8.58 -92.71 -0.80 -2.87 16 39 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 40 H 0.07 -0.04 7.84 -2.39 -0.02 -0.06 16 41 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 42 H 0.11 -0.78 8.10 -2.39 -0.02 -0.80 16 43 H 0.41 -3.37 6.73 -92.71 -0.62 -4.00 16 44 H 0.41 0.61 9.06 -74.06 -0.67 -0.07 16 45 H 0.15 0.37 8.06 -2.91 -0.02 0.35 16 46 H 0.10 -0.64 7.96 -2.38 -0.02 -0.66 16 47 H 0.41 -5.36 8.74 -74.06 -0.65 -6.01 16 48 H -0.29 -0.09 7.04 99.48 0.70 0.61 16 49 H -0.28 0.22 7.11 99.48 0.71 0.93 16 50 H 0.14 -0.25 4.83 -2.91 -0.01 -0.27 16 51 H 0.17 -1.50 6.40 -2.91 -0.02 -1.52 16 52 H 0.09 -0.28 7.90 -2.39 -0.02 -0.30 16 53 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 Total: 0.00 -28.98 428.10 -2.65 -31.63 By element: Atomic # 1 Polarization: -14.65 SS G_CDS: -1.72 Total: -16.37 kcal Atomic # 6 Polarization: 8.62 SS G_CDS: 5.39 Total: 14.02 kcal Atomic # 7 Polarization: 1.59 SS G_CDS: -5.60 Total: -4.00 kcal Atomic # 8 Polarization: -20.00 SS G_CDS: -2.77 Total: -22.77 kcal Atomic # 14 Polarization: -4.54 SS G_CDS: 2.05 Total: -2.50 kcal Total: -28.98 -2.65 -31.63 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_13422076.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.838 kcal (2) G-P(sol) polarization free energy of solvation -28.983 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.821 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.645 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.628 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.467 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds