Wall clock time and date at job start Sat Mar 6 2021 20:00:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53008 * 109.46960 * 2 1 4 4 C 1.52997 * 109.47214 * 240.00029 * 2 1 3 5 5 O 1.45205 * 109.47209 * 119.99731 * 2 1 3 6 6 C 1.34634 * 116.99560 * 60.00134 * 5 2 1 7 7 O 1.21512 * 120.00347 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99821 * 179.97438 * 6 5 2 9 9 C 1.46506 * 119.99873 * 179.97438 * 8 6 5 10 10 C 1.52999 * 109.46684 * 180.02562 * 9 8 6 11 11 H 1.08998 * 112.85176 * 43.80964 * 10 9 8 12 12 C 1.53786 * 113.61029 * 174.99939 * 10 9 8 13 13 C 1.53791 * 87.08068 * 139.98202 * 12 10 9 14 14 H 1.08991 * 113.61583 * 220.02003 * 13 12 10 15 15 N 1.46497 * 113.61069 * 89.20037 * 13 12 10 16 16 C 1.34778 * 119.99728 * 155.00276 * 15 13 12 17 17 O 1.21604 * 120.00198 * 0.02562 * 16 15 13 18 18 C 1.47386 * 119.99928 * 179.97438 * 16 15 13 19 19 C 1.36415 * 127.18852 * 359.68154 * 18 16 15 20 20 O 1.33661 * 108.39208 * 179.83734 * 19 18 16 21 21 C 1.34217 * 110.90600 * 0.44811 * 20 19 18 22 22 C 1.50699 * 125.43441 * 179.72617 * 21 20 19 23 23 O 1.42894 * 109.47372 * 120.00333 * 22 21 20 24 24 Si 1.86304 * 109.47044 * 0.02562 * 22 21 20 25 25 C 1.34178 * 109.12550 * 359.72884 * 21 20 19 26 26 C 1.53780 * 113.61531 * 272.49722 * 10 9 8 27 27 H 1.09006 * 109.47113 * 300.00252 * 1 2 3 28 28 H 1.08994 * 109.47260 * 59.99859 * 1 2 3 29 29 H 1.08995 * 109.47040 * 180.02562 * 1 2 3 30 30 H 1.09005 * 109.46402 * 180.02562 * 3 2 1 31 31 H 1.08994 * 109.47253 * 299.99590 * 3 2 1 32 32 H 1.08996 * 109.47065 * 60.00286 * 3 2 1 33 33 H 1.08996 * 109.47165 * 300.00296 * 4 2 1 34 34 H 1.09003 * 109.47043 * 59.99678 * 4 2 1 35 35 H 1.08999 * 109.47232 * 179.97438 * 4 2 1 36 36 H 0.96995 * 120.00018 * 0.27670 * 8 6 5 37 37 H 1.09000 * 109.47212 * 300.00355 * 9 8 6 38 38 H 1.09001 * 109.46577 * 60.00430 * 9 8 6 39 39 H 1.08996 * 113.61664 * 254.52935 * 12 10 9 40 40 H 1.08996 * 113.61560 * 25.35421 * 12 10 9 41 41 H 0.97001 * 120.00496 * 335.00033 * 15 13 12 42 42 H 1.07995 * 125.80517 * 0.02562 * 19 18 16 43 43 H 1.08998 * 109.47081 * 240.00593 * 22 21 20 44 44 H 0.96704 * 113.99867 * 299.99831 * 23 22 21 45 45 H 1.48497 * 109.99923 * 58.68446 * 24 22 21 46 46 H 1.48501 * 109.99673 * 180.02562 * 24 22 21 47 47 H 1.07997 * 127.02128 * 179.97438 * 25 21 20 48 48 H 1.08991 * 113.61583 * 334.56810 * 26 10 9 49 49 H 1.09000 * 113.61178 * 105.47404 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9722 1.3384 7 8 0.9509 -2.5094 0.5041 8 7 2.0680 -2.6656 2.4167 9 6 1.6739 -4.0668 2.5832 10 6 2.2741 -4.6148 3.8795 11 1 2.1799 -3.9219 4.7156 12 6 1.8203 -6.0461 4.2116 13 6 3.2654 -6.3152 4.6638 14 1 3.6380 -7.2974 4.3734 15 7 3.5043 -6.0109 6.0767 16 6 4.4999 -6.6311 6.7406 17 8 5.2002 -7.4428 6.1665 18 6 4.7407 -6.3246 8.1620 19 6 4.0548 -5.4408 8.9426 20 8 4.5844 -5.4626 10.1696 21 6 5.6100 -6.3260 10.2333 22 6 6.4438 -6.6034 11.4576 23 8 6.3381 -7.9860 11.8026 24 14 5.8310 -5.5616 12.8753 25 6 5.7744 -6.9026 9.0329 26 6 3.6909 -5.1877 3.7083 27 1 -0.3634 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3633 -1.0276 0.0005 30 1 3.1300 1.4425 -0.0005 31 1 1.6767 1.9564 -0.8900 32 1 1.6767 1.9564 0.8900 33 1 1.6766 -1.7488 -1.2493 34 1 1.6766 -0.2074 -2.1392 35 1 3.1300 -0.7208 -1.2494 36 1 2.6246 -2.2357 3.0847 37 1 0.5870 -4.1356 2.6289 38 1 2.0397 -4.6500 1.7380 39 1 1.0928 -6.0967 5.0216 40 1 1.5206 -6.6232 3.3368 41 1 2.9460 -5.3632 6.5346 42 1 3.2231 -4.8299 8.6242 43 1 7.4857 -6.3592 11.2506 44 1 5.4364 -8.2743 12.0002 45 1 4.4025 -5.8628 13.1467 46 1 6.6456 -5.8255 14.0886 47 1 6.5151 -7.6404 8.7619 48 1 3.9039 -5.5306 2.6959 49 1 4.4734 -4.5453 4.1122 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_13456056.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:00:29 Heat of formation + Delta-G solvation = -107.115286 kcal Electronic energy + Delta-G solvation = -30653.927296 eV Core-core repulsion = 26164.542273 eV Total energy + Delta-G solvation = -4489.385023 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.176 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -43.71478 -41.84053 -41.22392 -39.53907 -38.26961 -38.16913 -35.94543 -35.01378 -34.42356 -33.61649 -31.74965 -29.07759 -28.37443 -28.30282 -26.74913 -26.69526 -25.36302 -23.89205 -22.84103 -22.31919 -21.28930 -21.09766 -20.29103 -19.35735 -19.11541 -17.84949 -17.72474 -17.55463 -17.43286 -17.31017 -16.93608 -16.39204 -16.17785 -16.10591 -15.78595 -15.71018 -15.59967 -15.28505 -14.86888 -14.74749 -14.46545 -14.22276 -13.98753 -13.91670 -13.56245 -13.45912 -13.35649 -13.22396 -12.96799 -12.94657 -12.91781 -12.86568 -12.46142 -12.34667 -12.14606 -12.00976 -11.65247 -11.40083 -11.30443 -11.26955 -11.10429 -10.98864 -10.77512 -10.22628 -10.13105 -9.77631 -4.91098 0.26602 0.80851 1.18552 1.19166 1.53750 1.75481 1.76443 1.96026 2.01145 2.22904 3.12728 3.20595 3.43907 3.49120 3.55603 3.59190 3.74060 3.75664 3.79218 3.84313 3.94197 3.98208 4.26212 4.33342 4.42959 4.48730 4.51915 4.55391 4.60572 4.62280 4.73614 4.75982 4.79081 4.82525 4.85575 4.87112 4.87370 4.90930 5.00597 5.06828 5.10492 5.13415 5.17309 5.26384 5.26608 5.36729 5.57050 5.61129 5.83197 6.34452 6.40492 6.47076 7.14991 7.34931 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.181 4.181 5 O -0.370 6.370 6 C 0.640 3.360 7 O -0.597 6.597 8 N -0.698 5.698 9 C 0.147 3.853 10 C -0.106 4.106 11 H 0.123 0.877 12 C -0.122 4.122 13 C 0.111 3.889 14 H 0.080 0.920 15 N -0.690 5.690 16 C 0.589 3.411 17 O -0.587 6.587 18 C -0.270 4.270 19 C 0.069 3.931 20 O -0.164 6.164 21 C -0.050 4.050 22 C -0.047 4.047 23 O -0.540 6.540 24 Si 0.794 3.206 25 C -0.153 4.153 26 C -0.146 4.146 27 H 0.063 0.937 28 H 0.085 0.915 29 H 0.063 0.937 30 H 0.068 0.932 31 H 0.097 0.903 32 H 0.071 0.929 33 H 0.063 0.937 34 H 0.086 0.914 35 H 0.061 0.939 36 H 0.417 0.583 37 H 0.071 0.929 38 H 0.063 0.937 39 H 0.096 0.904 40 H 0.103 0.897 41 H 0.418 0.582 42 H 0.266 0.734 43 H 0.148 0.852 44 H 0.391 0.609 45 H -0.286 1.286 46 H -0.289 1.289 47 H 0.142 0.858 48 H 0.089 0.911 49 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.394 7.491 3.282 8.855 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.284 6.284 6 C 0.393 3.607 7 O -0.488 6.488 8 N -0.358 5.358 9 C 0.025 3.975 10 C -0.125 4.125 11 H 0.141 0.859 12 C -0.160 4.160 13 C 0.006 3.994 14 H 0.098 0.902 15 N -0.342 5.342 16 C 0.378 3.622 17 O -0.468 6.468 18 C -0.275 4.275 19 C -0.001 4.001 20 O -0.059 6.059 21 C -0.098 4.098 22 C -0.155 4.155 23 O -0.348 6.348 24 Si 0.696 3.304 25 C -0.173 4.173 26 C -0.184 4.184 27 H 0.082 0.918 28 H 0.104 0.896 29 H 0.082 0.918 30 H 0.087 0.913 31 H 0.116 0.884 32 H 0.090 0.910 33 H 0.082 0.918 34 H 0.105 0.895 35 H 0.080 0.920 36 H 0.254 0.746 37 H 0.089 0.911 38 H 0.081 0.919 39 H 0.115 0.885 40 H 0.122 0.878 41 H 0.256 0.744 42 H 0.281 0.719 43 H 0.165 0.835 44 H 0.241 0.759 45 H -0.212 1.212 46 H -0.216 1.216 47 H 0.160 0.840 48 H 0.108 0.892 49 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -3.038 6.896 3.361 8.251 hybrid contribution -0.230 -1.287 -0.258 1.332 sum -3.268 5.610 3.103 7.196 Atomic orbital electron populations 1.22467 0.93975 1.03685 1.03539 1.22339 0.94502 0.92569 0.81500 1.21890 1.02416 0.90889 1.04273 1.22476 1.01582 1.02247 0.97471 1.86307 1.71562 1.23385 1.47172 1.18412 0.78825 0.80784 0.82645 1.90912 1.42399 1.71057 1.44452 1.44729 1.55294 1.12787 1.22987 1.21427 1.00062 0.78106 0.97892 1.22834 0.95385 0.97173 0.97076 0.85869 1.23269 0.94865 0.94924 1.02966 1.21847 0.98131 0.99147 0.80323 0.90211 1.45284 1.33564 1.44294 1.11046 1.17520 0.79802 0.79680 0.85204 1.90796 1.49261 1.36663 1.70120 1.21454 1.03997 1.06922 0.95105 1.25349 0.97549 0.97011 0.80207 1.83723 1.38564 1.51419 1.32208 1.22671 0.92774 0.96041 0.98338 1.24713 1.03076 0.88617 0.99065 1.86652 1.34996 1.23734 1.89457 0.93454 0.76319 0.87032 0.73560 1.22552 1.00429 1.02288 0.91996 1.23528 0.97211 0.97605 1.00099 0.91788 0.89573 0.91799 0.91256 0.88408 0.91036 0.91840 0.89531 0.92040 0.74602 0.91094 0.91903 0.88511 0.87810 0.74410 0.71886 0.83498 0.75936 1.21231 1.21613 0.84031 0.89221 0.90995 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.44 8.37 71.98 0.60 0.16 16 2 C 0.13 0.30 1.13 -10.79 -0.01 0.28 16 3 C -0.14 0.37 8.85 71.98 0.64 1.01 16 4 C -0.18 -0.55 8.37 71.98 0.60 0.05 16 5 O -0.37 -1.64 9.94 -55.44 -0.55 -2.19 16 6 C 0.64 3.46 8.06 129.79 1.05 4.51 16 7 O -0.60 -6.71 11.88 19.80 0.24 -6.48 16 8 N -0.70 1.45 5.56 -590.84 -3.29 -1.83 16 9 C 0.15 -0.66 5.51 86.38 0.48 -0.18 16 10 C -0.11 1.04 3.63 -10.27 -0.04 1.00 16 11 H 0.12 -1.75 8.14 -2.39 -0.02 -1.77 16 12 C -0.12 1.11 7.39 31.13 0.23 1.34 16 13 C 0.11 -0.41 4.32 45.52 0.20 -0.21 16 14 H 0.08 0.22 7.46 -2.39 -0.02 0.20 16 15 N -0.69 3.37 5.26 -443.33 -2.33 1.04 16 16 C 0.59 2.55 7.81 86.65 0.68 3.22 16 17 O -0.59 -9.00 16.58 -4.04 -0.07 -9.06 16 18 C -0.27 -0.24 6.31 -18.99 -0.12 -0.36 16 19 C 0.07 -0.53 11.61 67.39 0.78 0.25 16 20 O -0.16 0.66 8.89 4.37 0.04 0.69 16 21 C -0.05 0.02 6.20 24.76 0.15 0.17 16 22 C -0.05 0.10 2.98 71.24 0.21 0.31 16 23 O -0.54 -0.75 12.86 -148.98 -1.92 -2.66 16 24 Si 0.79 -3.28 32.08 68.60 2.20 -1.08 16 25 C -0.15 -0.65 10.88 23.65 0.26 -0.40 16 26 C -0.15 0.79 7.43 31.12 0.23 1.02 16 27 H 0.06 0.09 8.14 -2.38 -0.02 0.07 16 28 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 29 H 0.06 0.50 5.88 -2.39 -0.01 0.48 16 30 H 0.07 -0.19 8.14 -2.38 -0.02 -0.21 16 31 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 32 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 33 H 0.06 0.54 5.88 -2.39 -0.01 0.52 16 34 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 35 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 36 H 0.42 -2.86 8.58 -92.71 -0.80 -3.66 16 37 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 38 H 0.06 -0.10 7.85 -2.39 -0.02 -0.11 16 39 H 0.10 -1.14 8.14 -2.39 -0.02 -1.16 16 40 H 0.10 -0.90 8.10 -2.39 -0.02 -0.92 16 41 H 0.42 -5.59 7.67 -92.71 -0.71 -6.30 16 42 H 0.27 -5.16 7.47 -2.91 -0.02 -5.19 16 43 H 0.15 -0.67 7.96 -2.39 -0.02 -0.69 16 44 H 0.39 -1.72 8.70 -74.05 -0.64 -2.36 16 45 H -0.29 -0.23 7.11 99.48 0.71 0.48 16 46 H -0.29 -0.72 7.11 99.48 0.71 -0.01 16 47 H 0.14 1.07 8.06 -2.91 -0.02 1.05 16 48 H 0.09 -0.33 7.90 -2.39 -0.02 -0.35 16 49 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 Total: 0.00 -29.85 407.20 -0.86 -30.71 By element: Atomic # 1 Polarization: -20.22 SS G_CDS: -1.12 Total: -21.34 kcal Atomic # 6 Polarization: 6.27 SS G_CDS: 5.94 Total: 12.20 kcal Atomic # 7 Polarization: 4.83 SS G_CDS: -5.62 Total: -0.79 kcal Atomic # 8 Polarization: -17.44 SS G_CDS: -2.26 Total: -19.70 kcal Atomic # 14 Polarization: -3.28 SS G_CDS: 2.20 Total: -1.08 kcal Total: -29.85 -0.86 -30.71 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_13456056.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.405 kcal (2) G-P(sol) polarization free energy of solvation -29.852 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.257 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.859 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.711 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.115 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds