Wall clock time and date at job start Sat Mar 6 2021 20:00:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37876 * 126.45610 * 2 1 4 4 C 1.46680 * 126.23113 * 0.05813 * 3 2 1 5 5 O 1.21686 * 120.00152 * 359.97438 * 4 3 2 6 6 N 1.34779 * 119.99647 * 179.97438 * 4 3 2 7 7 C 1.46498 * 119.99896 * 179.97438 * 6 4 3 8 8 H 1.09003 * 112.84836 * 23.80739 * 7 6 4 9 9 C 1.53776 * 113.61471 * 154.99985 * 7 6 4 10 10 C 1.53779 * 87.08097 * 89.12195 * 9 7 6 11 11 H 1.09008 * 113.61030 * 270.88422 * 10 9 7 12 12 C 1.53005 * 113.61773 * 140.06659 * 10 9 7 13 13 N 1.46500 * 109.46743 * 174.99814 * 12 10 9 14 14 C 1.34781 * 119.99501 * 179.97438 * 13 12 10 15 15 O 1.21508 * 119.99729 * 0.02562 * 14 13 12 16 16 O 1.34641 * 119.99857 * 179.97438 * 14 13 12 17 17 C 1.45199 * 116.99771 * 180.02562 * 16 14 13 18 18 C 1.52999 * 109.47119 * 60.00270 * 17 16 14 19 19 C 1.52996 * 109.47193 * 180.02562 * 17 16 14 20 20 C 1.53003 * 109.47333 * 300.00476 * 17 16 14 21 21 C 1.53777 * 87.08333 * 25.43369 * 10 9 7 22 22 N 1.37654 * 107.53359 * 179.76441 * 3 2 1 23 23 C 1.35535 * 108.64394 * 0.42133 * 22 3 2 24 24 C 1.50699 * 125.56446 * 179.83390 * 23 22 3 25 25 O 1.42901 * 109.46830 * 299.71968 * 24 23 22 26 26 Si 1.86298 * 109.46950 * 179.72405 * 24 23 22 27 27 C 1.35453 * 108.87065 * 359.57387 * 23 22 3 28 28 H 1.09005 * 109.46866 * 269.99421 * 1 2 3 29 29 H 1.08998 * 109.47493 * 29.99860 * 1 2 3 30 30 H 1.09002 * 109.46971 * 150.00027 * 1 2 3 31 31 H 0.97001 * 120.00394 * 0.02562 * 6 4 3 32 32 H 1.09006 * 113.61415 * 203.66817 * 9 7 6 33 33 H 1.09001 * 113.61786 * 334.48702 * 9 7 6 34 34 H 1.08999 * 109.46898 * 294.99633 * 12 10 9 35 35 H 1.09003 * 109.46664 * 55.00069 * 12 10 9 36 36 H 0.96997 * 120.00407 * 359.97438 * 13 12 10 37 37 H 1.08997 * 109.47377 * 59.99967 * 18 17 16 38 38 H 1.09007 * 109.47360 * 179.97438 * 18 17 16 39 39 H 1.09000 * 109.47460 * 299.99869 * 18 17 16 40 40 H 1.08994 * 109.47133 * 59.99476 * 19 17 16 41 41 H 1.09001 * 109.47517 * 179.97438 * 19 17 16 42 42 H 1.09007 * 109.47139 * 300.00274 * 19 17 16 43 43 H 1.08996 * 109.47191 * 59.99689 * 20 17 16 44 44 H 1.09001 * 109.47182 * 180.02562 * 20 17 16 45 45 H 1.09007 * 109.46785 * 300.00336 * 20 17 16 46 46 H 1.09004 * 113.61466 * 220.02664 * 21 10 9 47 47 H 1.08995 * 113.61589 * 89.11648 * 21 10 9 48 48 H 0.96998 * 125.67705 * 180.28276 * 22 3 2 49 49 H 1.08991 * 109.47351 * 59.72116 * 24 23 22 50 50 H 0.96708 * 114.00246 * 299.99864 * 25 24 23 51 51 H 1.48506 * 109.99834 * 180.02562 * 26 24 23 52 52 H 1.48502 * 110.00011 * 301.31529 * 26 24 23 53 53 H 1.08004 * 126.06714 * 180.29825 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1090 0.0000 4 6 1.8897 2.5093 0.0012 5 8 0.7026 2.7766 0.0019 6 7 2.8036 3.5000 0.0016 7 6 2.3677 4.8986 0.0022 8 1 1.3644 5.0290 0.4078 9 6 3.4036 5.8664 0.5980 10 6 3.9849 5.9928 -0.8200 11 1 4.7514 5.2512 -1.0453 12 6 4.4108 7.4167 -1.1833 13 7 5.0572 7.4127 -2.4980 14 6 5.5166 8.5643 -3.0265 15 8 5.3950 9.6056 -2.4124 16 8 6.1111 8.5605 -4.2346 17 6 6.5821 9.8371 -4.7414 18 6 7.6166 10.4188 -3.7759 19 6 7.2234 9.6349 -6.1157 20 6 5.4019 10.8028 -4.8669 21 6 2.5888 5.6135 -1.3413 22 7 3.6284 0.6626 0.0054 23 6 3.6218 -0.6928 -0.0008 24 6 4.8435 -1.5752 -0.0013 25 8 5.6239 -1.3073 -1.1681 26 14 4.3183 -3.3626 -0.0024 27 6 2.3380 -1.1247 -0.0005 28 1 -0.3633 -0.0001 1.0277 29 1 -0.3634 0.8900 -0.5138 30 1 -0.3633 -0.8900 -0.5138 31 1 3.7499 3.2869 0.0007 32 1 2.9695 6.7921 0.9761 33 1 4.0823 5.3958 1.3093 34 1 3.5330 8.0623 -1.2120 35 1 5.1111 7.7884 -0.4352 36 1 5.1545 6.5813 -2.9880 37 1 8.4573 9.7309 -3.6864 38 1 7.9705 11.3770 -4.1566 39 1 7.1594 10.5629 -2.7970 40 1 6.4861 9.2206 -6.8032 41 1 7.5765 10.5933 -6.4964 42 1 8.0641 8.9468 -6.0266 43 1 4.9447 10.9468 -3.8880 44 1 5.7554 11.7609 -5.2478 45 1 4.6649 10.3882 -5.5547 46 1 2.6107 4.9382 -2.1967 47 1 1.9320 6.4699 -1.4935 48 1 4.4190 1.2245 0.0105 49 1 5.4389 -1.3720 0.8886 50 1 5.1562 -1.4669 -1.9994 51 1 5.5141 -4.2433 -0.0024 52 1 3.4793 -3.6462 1.1896 53 1 2.0137 -2.1549 -0.0001 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_13940406.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:00:32 Heat of formation + Delta-G solvation = -86.869555 kcal Electronic energy + Delta-G solvation = -33034.778646 eV Core-core repulsion = 28488.452586 eV Total energy + Delta-G solvation = -4546.326059 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.203 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.62579 -41.86470 -41.09303 -39.48036 -38.30928 -37.68140 -36.00118 -35.06034 -34.35619 -33.38023 -31.62625 -29.17967 -28.39661 -28.32728 -28.17418 -26.88342 -26.74094 -24.37451 -23.02103 -22.75701 -21.61964 -21.24645 -20.59053 -20.19807 -19.56176 -19.14529 -18.08109 -17.71640 -17.35113 -17.13548 -16.74100 -16.42754 -16.36965 -16.04633 -15.78093 -15.72509 -15.40356 -15.32118 -15.00419 -14.98695 -14.57675 -14.48795 -14.37969 -14.03473 -13.81504 -13.60133 -13.54401 -13.49333 -13.38278 -13.25484 -13.00725 -12.95596 -12.94345 -12.89148 -12.48891 -12.37524 -12.18535 -12.05683 -11.99040 -11.70208 -11.42950 -11.35270 -11.15155 -11.13490 -10.66691 -10.28828 -10.19768 -9.82413 -9.19816 -4.91376 0.28966 1.14771 1.22947 1.52103 1.72300 1.72563 1.89727 1.98224 2.21694 2.23170 3.08486 3.38780 3.47153 3.53910 3.56468 3.68735 3.71746 3.75134 3.76834 3.83245 3.91793 4.13618 4.19431 4.23367 4.42257 4.44516 4.50971 4.57595 4.58504 4.68578 4.71725 4.73628 4.74218 4.78400 4.78655 4.82359 4.83255 4.84911 4.90152 4.95732 5.01135 5.06879 5.10645 5.16726 5.22589 5.24172 5.32739 5.35274 5.50976 5.56853 5.63509 5.84857 6.29750 6.35630 6.46618 6.67541 7.05745 7.30638 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 C -0.085 4.085 3 C -0.070 4.070 4 C 0.590 3.410 5 O -0.561 6.561 6 N -0.700 5.700 7 C 0.114 3.886 8 H 0.088 0.912 9 C -0.123 4.123 10 C -0.109 4.109 11 H 0.115 0.885 12 C 0.148 3.852 13 N -0.699 5.699 14 C 0.641 3.359 15 O -0.596 6.596 16 O -0.370 6.370 17 C 0.127 3.873 18 C -0.180 4.180 19 C -0.138 4.138 20 C -0.180 4.180 21 C -0.143 4.143 22 N -0.512 5.512 23 C 0.035 3.965 24 C -0.052 4.052 25 O -0.553 6.553 26 Si 0.800 3.200 27 C -0.209 4.209 28 H 0.064 0.936 29 H 0.061 0.939 30 H 0.082 0.918 31 H 0.408 0.592 32 H 0.108 0.892 33 H 0.090 0.910 34 H 0.066 0.934 35 H 0.070 0.930 36 H 0.416 0.584 37 H 0.062 0.938 38 H 0.086 0.914 39 H 0.063 0.937 40 H 0.069 0.931 41 H 0.098 0.902 42 H 0.070 0.930 43 H 0.063 0.937 44 H 0.087 0.913 45 H 0.061 0.939 46 H 0.070 0.930 47 H 0.094 0.906 48 H 0.428 0.572 49 H 0.117 0.883 50 H 0.399 0.601 51 H -0.295 1.295 52 H -0.286 1.286 53 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.676 -3.228 -2.837 5.656 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.094 4.094 3 C -0.184 4.184 4 C 0.379 3.621 5 O -0.439 6.439 6 N -0.352 5.352 7 C 0.008 3.992 8 H 0.106 0.894 9 C -0.162 4.162 10 C -0.127 4.127 11 H 0.133 0.867 12 C 0.026 3.974 13 N -0.359 5.359 14 C 0.394 3.606 15 O -0.487 6.487 16 O -0.285 6.285 17 C 0.091 3.909 18 C -0.237 4.237 19 C -0.195 4.195 20 C -0.238 4.238 21 C -0.182 4.182 22 N -0.110 5.110 23 C -0.084 4.084 24 C -0.162 4.162 25 O -0.361 6.361 26 Si 0.704 3.296 27 C -0.233 4.233 28 H 0.082 0.918 29 H 0.080 0.920 30 H 0.101 0.899 31 H 0.245 0.755 32 H 0.126 0.874 33 H 0.108 0.892 34 H 0.084 0.916 35 H 0.088 0.912 36 H 0.253 0.747 37 H 0.081 0.919 38 H 0.105 0.895 39 H 0.082 0.918 40 H 0.088 0.912 41 H 0.117 0.883 42 H 0.089 0.911 43 H 0.082 0.918 44 H 0.105 0.895 45 H 0.080 0.920 46 H 0.088 0.912 47 H 0.113 0.887 48 H 0.267 0.733 49 H 0.134 0.866 50 H 0.249 0.751 51 H -0.223 1.223 52 H -0.213 1.213 53 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 3.400 -2.904 -1.733 4.795 hybrid contribution 0.833 0.634 0.316 1.093 sum 4.232 -2.270 -1.417 5.007 Atomic orbital electron populations 1.20344 0.89244 1.03069 1.02169 1.20169 0.96282 0.91341 1.01595 1.20115 0.84495 0.93031 1.20710 1.17187 0.85596 0.83672 0.75634 1.90824 1.17634 1.83706 1.51781 1.45414 1.09487 1.05216 1.75036 1.21858 0.99572 0.79720 0.98019 0.89369 1.23279 0.97304 0.99817 0.95783 1.22815 0.97235 0.95430 0.97254 0.86727 1.21416 0.96986 0.97482 0.81500 1.44736 1.61741 1.07978 1.21447 1.18397 0.77250 0.84663 0.80296 1.90910 1.62609 1.31869 1.63304 1.86309 1.71006 1.38418 1.32759 1.22348 0.94180 0.79445 0.94952 1.22470 0.98379 1.02321 1.00517 1.21892 1.01107 1.04334 0.92149 1.22477 0.97983 1.00050 1.03241 1.23519 0.96790 1.00688 0.97201 1.41787 1.06756 1.06701 1.55727 1.21279 0.96988 0.83415 1.06716 1.25003 0.90736 1.08828 0.91651 1.86475 1.41989 1.91268 1.16390 0.93004 0.78975 0.70715 0.86869 1.20831 0.90871 0.99518 1.12050 0.91767 0.91964 0.89947 0.75545 0.87410 0.89152 0.91556 0.91212 0.74725 0.91890 0.89481 0.91805 0.91221 0.88318 0.91128 0.91826 0.89455 0.91997 0.91156 0.88745 0.73266 0.86556 0.75055 1.22255 1.21287 0.81684 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.37 9.83 71.23 0.70 0.33 16 2 C -0.09 -0.32 6.21 -19.56 -0.12 -0.44 16 3 C -0.07 -0.17 7.06 40.35 0.28 0.11 16 4 C 0.59 2.62 7.79 86.45 0.67 3.30 16 5 O -0.56 -6.94 14.40 -4.30 -0.06 -7.00 16 6 N -0.70 2.22 5.26 -444.00 -2.33 -0.12 16 7 C 0.11 -0.35 4.32 45.52 0.20 -0.16 16 8 H 0.09 0.17 7.46 -2.39 -0.02 0.15 16 9 C -0.12 0.97 7.39 31.12 0.23 1.20 16 10 C -0.11 0.89 3.63 -10.27 -0.04 0.86 16 11 H 0.11 -1.29 8.14 -2.38 -0.02 -1.31 16 12 C 0.15 -0.50 5.51 86.38 0.48 -0.03 16 13 N -0.70 0.65 5.56 -590.83 -3.29 -2.63 16 14 C 0.64 3.99 8.06 129.79 1.05 5.04 16 15 O -0.60 -7.05 11.88 19.81 0.24 -6.82 16 16 O -0.37 -1.94 9.94 -55.51 -0.55 -2.49 16 17 C 0.13 0.36 1.13 -10.79 -0.01 0.35 16 18 C -0.18 -0.55 8.37 71.98 0.60 0.05 16 19 C -0.14 0.30 8.85 71.98 0.64 0.94 16 20 C -0.18 -0.61 8.37 71.98 0.60 -0.01 16 21 C -0.14 0.69 7.43 31.12 0.23 0.92 16 22 N -0.51 1.77 5.99 -171.92 -1.03 0.74 16 23 C 0.04 -0.11 6.47 41.34 0.27 0.16 16 24 C -0.05 0.28 3.08 71.24 0.22 0.50 16 25 O -0.55 3.03 12.88 -148.98 -1.92 1.12 16 26 Si 0.80 -4.41 30.54 68.60 2.10 -2.31 16 27 C -0.21 0.15 9.27 22.01 0.20 0.36 16 28 H 0.06 0.28 8.14 -2.38 -0.02 0.26 16 29 H 0.06 0.51 6.49 -2.39 -0.02 0.49 16 30 H 0.08 0.00 8.14 -2.39 -0.02 -0.02 16 31 H 0.41 -3.75 7.83 -92.71 -0.73 -4.48 16 32 H 0.11 -0.87 8.10 -2.38 -0.02 -0.89 16 33 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 34 H 0.07 -0.07 7.85 -2.39 -0.02 -0.09 16 35 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 36 H 0.42 -2.23 8.58 -92.71 -0.80 -3.02 16 37 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 38 H 0.09 -0.03 8.14 -2.38 -0.02 -0.05 16 39 H 0.06 0.53 5.88 -2.39 -0.01 0.52 16 40 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 41 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 42 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 43 H 0.06 0.55 5.88 -2.39 -0.01 0.54 16 44 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 45 H 0.06 0.17 8.14 -2.38 -0.02 0.15 16 46 H 0.07 -0.24 8.14 -2.38 -0.02 -0.25 16 47 H 0.09 -0.37 7.90 -2.39 -0.02 -0.39 16 48 H 0.43 -3.75 8.19 -92.71 -0.76 -4.51 16 49 H 0.12 -0.62 7.96 -2.39 -0.02 -0.64 16 50 H 0.40 -4.98 8.70 -74.05 -0.64 -5.63 16 51 H -0.29 -0.48 7.11 99.48 0.71 0.23 16 52 H -0.29 -0.07 7.11 99.48 0.71 0.64 16 53 H 0.17 -0.78 6.17 -2.91 -0.02 -0.80 16 Total: 0.00 -24.43 426.28 -2.57 -27.00 By element: Atomic # 1 Polarization: -19.05 SS G_CDS: -1.92 Total: -20.97 kcal Atomic # 6 Polarization: 7.29 SS G_CDS: 6.20 Total: 13.49 kcal Atomic # 7 Polarization: 4.64 SS G_CDS: -6.65 Total: -2.01 kcal Atomic # 8 Polarization: -12.90 SS G_CDS: -2.30 Total: -15.20 kcal Atomic # 14 Polarization: -4.41 SS G_CDS: 2.10 Total: -2.31 kcal Total: -24.43 -2.57 -27.00 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_13940406.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.872 kcal (2) G-P(sol) polarization free energy of solvation -24.427 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.299 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.997 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.870 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds