Wall clock time and date at job start Sat Mar 6 2021 20:00:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53006 * 109.47249 * 2 1 4 4 C 1.53000 * 109.47137 * 240.00548 * 2 1 3 5 5 O 1.45198 * 109.47475 * 120.00165 * 2 1 3 6 6 C 1.34637 * 116.99722 * 60.00180 * 5 2 1 7 7 O 1.21510 * 120.00195 * 359.97438 * 6 5 2 8 8 N 1.34783 * 120.00031 * 180.02562 * 6 5 2 9 9 C 1.46500 * 120.00119 * 179.97438 * 8 6 5 10 10 C 1.52995 * 109.47108 * 179.97438 * 9 8 6 11 11 H 1.09002 * 112.85043 * 314.66487 * 10 9 8 12 12 C 1.53785 * 113.69093 * 85.93603 * 10 9 8 13 13 C 1.53779 * 87.08093 * 139.99088 * 12 10 9 14 14 H 1.08994 * 113.61314 * 220.01752 * 13 12 10 15 15 N 1.46502 * 113.69134 * 89.12362 * 13 12 10 16 16 C 1.34780 * 119.99583 * 107.46310 * 15 13 12 17 17 O 1.21280 * 120.00213 * 0.02562 * 16 15 13 18 18 C 1.50706 * 119.99755 * 180.02562 * 16 15 13 19 19 C 1.50702 * 109.46910 * 180.02562 * 18 16 15 20 20 C 1.34847 * 125.88932 * 85.02214 * 19 18 16 21 21 C 1.40893 * 107.41551 * 179.97438 * 20 19 18 22 22 C 1.34848 * 107.41857 * 359.97438 * 21 20 19 23 23 C 1.50701 * 125.89348 * 180.02562 * 22 21 20 24 24 O 1.42903 * 109.46846 * 244.97488 * 23 22 21 25 25 Si 1.86293 * 109.46995 * 4.97702 * 23 22 21 26 26 N 1.36338 * 125.88500 * 264.71038 * 19 18 16 27 27 C 1.53781 * 113.61293 * 183.47228 * 10 9 8 28 28 H 1.08998 * 109.47173 * 299.99724 * 1 2 3 29 29 H 1.09000 * 109.47094 * 59.99848 * 1 2 3 30 30 H 1.09002 * 109.47194 * 179.97438 * 1 2 3 31 31 H 1.08992 * 109.47334 * 179.97438 * 3 2 1 32 32 H 1.08996 * 109.47012 * 300.00824 * 3 2 1 33 33 H 1.09007 * 109.46696 * 60.00225 * 3 2 1 34 34 H 1.09002 * 109.46957 * 299.99997 * 4 2 1 35 35 H 1.09000 * 109.47451 * 59.99823 * 4 2 1 36 36 H 1.09003 * 109.47276 * 179.97438 * 4 2 1 37 37 H 0.96997 * 119.99419 * 359.97438 * 8 6 5 38 38 H 1.09005 * 109.46936 * 59.99437 * 9 8 6 39 39 H 1.09004 * 109.46937 * 300.00111 * 9 8 6 40 40 H 1.09003 * 113.60734 * 254.54208 * 12 10 9 41 41 H 1.08996 * 113.61146 * 25.43706 * 12 10 9 42 42 H 0.96999 * 120.00301 * 287.47041 * 15 13 12 43 43 H 1.09002 * 109.46500 * 300.00140 * 18 16 15 44 44 H 1.08995 * 109.47044 * 60.00072 * 18 16 15 45 45 H 1.08000 * 126.29793 * 0.02562 * 20 19 18 46 46 H 1.07994 * 126.29321 * 179.97438 * 21 20 19 47 47 H 1.09003 * 109.46865 * 124.97611 * 23 22 21 48 48 H 0.96705 * 113.99296 * 180.02562 * 24 23 22 49 49 H 1.48503 * 109.99856 * 299.99775 * 25 23 22 50 50 H 1.48496 * 110.00038 * 61.31877 * 25 23 22 51 51 H 0.96999 * 125.64310 * 0.02562 * 26 19 18 52 52 H 1.09005 * 113.61302 * 334.47929 * 27 10 9 53 53 H 1.08993 * 113.62030 * 105.38774 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7211 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3382 7 8 0.9509 -2.5094 0.5039 8 7 2.0674 -2.6655 2.4170 9 6 1.6733 -4.0667 2.5834 10 6 2.2736 -4.6148 3.8796 11 1 3.3222 -4.3460 4.0073 12 6 1.4117 -4.3416 5.1236 13 6 1.7741 -5.7615 5.5897 14 1 0.9421 -6.2964 6.0475 15 7 2.9997 -5.8235 6.3900 16 6 2.9272 -6.0470 7.7172 17 8 1.8475 -6.1972 8.2488 18 6 4.1878 -6.1101 8.5406 19 6 3.8336 -6.3694 9.9823 20 6 3.6181 -7.5790 10.5381 21 6 3.3167 -7.3702 11.8985 22 6 3.3602 -6.0412 12.1223 23 6 3.1032 -5.3583 13.4409 24 8 1.9287 -4.5509 13.3382 25 14 2.8598 -6.6427 14.7682 26 7 3.6817 -5.4219 10.9508 27 6 1.9886 -6.1087 4.1070 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0277 -0.0005 31 1 3.1299 1.4426 0.0005 32 1 1.6766 1.9564 -0.8899 33 1 1.6767 1.9563 0.8901 34 1 1.6766 -1.7488 -1.2494 35 1 1.6766 -0.2073 -2.1393 36 1 3.1300 -0.7207 -1.2496 37 1 2.6269 -2.2366 3.0831 38 1 2.0397 -4.6500 1.7386 39 1 0.5864 -4.1356 2.6283 40 1 1.8094 -3.5561 5.7663 41 1 0.3526 -4.2120 4.9011 42 1 3.8632 -5.7036 5.9648 43 1 4.8224 -6.9161 8.1720 44 1 4.7211 -5.1628 8.4618 45 1 3.6681 -8.5325 10.0335 46 1 3.0922 -8.1342 12.6281 47 1 3.9557 -4.7289 13.6963 48 1 1.7026 -4.0802 14.1522 49 1 1.7004 -7.5074 14.4317 50 1 4.0861 -7.4686 14.9068 51 1 3.7835 -4.4653 10.8266 52 1 1.0870 -6.4623 3.6066 53 1 2.8518 -6.7500 3.9292 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_14644196.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:00:36 Heat of formation + Delta-G solvation = -85.389134 kcal Electronic energy + Delta-G solvation = -32407.859239 eV Core-core repulsion = 27861.597375 eV Total energy + Delta-G solvation = -4546.261863 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.203 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -42.45885 -41.86689 -41.21411 -39.60759 -38.30416 -37.67894 -35.96132 -34.99445 -34.20046 -33.06056 -32.10540 -29.81488 -28.75053 -28.39714 -28.32513 -26.73134 -25.36402 -24.17906 -22.89456 -22.30132 -21.51379 -21.25058 -21.13188 -20.27313 -19.15684 -18.49170 -18.33505 -18.11349 -17.68966 -17.34494 -16.98340 -16.40241 -16.36748 -15.91617 -15.80019 -15.69863 -15.38779 -15.21179 -15.01563 -14.94069 -14.91555 -14.50979 -14.48771 -14.13595 -13.90409 -13.61166 -13.45617 -13.41117 -13.38210 -13.24899 -13.01146 -12.94395 -12.89242 -12.85696 -12.54592 -12.48377 -12.37161 -12.05390 -12.02604 -11.66538 -11.42665 -11.32357 -11.13273 -11.05250 -10.43962 -10.24671 -10.08429 -9.97423 -9.09555 -4.98801 0.93737 1.15194 1.25402 1.56337 1.65275 1.72513 1.73124 2.04997 2.19380 2.38873 3.09382 3.42955 3.46390 3.56711 3.59116 3.71491 3.72273 3.76818 3.80931 3.90922 3.91823 3.98990 4.14509 4.23037 4.23560 4.30180 4.45499 4.52485 4.54605 4.58284 4.59382 4.64925 4.71140 4.73614 4.75629 4.79968 4.83413 4.84981 4.85377 4.97089 5.04049 5.04928 5.08663 5.12006 5.16557 5.24150 5.24670 5.34155 5.56242 5.60226 5.82502 5.94958 6.36792 6.48589 6.58817 6.84669 7.24193 7.31459 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.640 3.360 7 O -0.596 6.596 8 N -0.698 5.698 9 C 0.147 3.853 10 C -0.105 4.105 11 H 0.122 0.878 12 C -0.146 4.146 13 C 0.112 3.888 14 H 0.075 0.925 15 N -0.697 5.697 16 C 0.512 3.488 17 O -0.580 6.580 18 C -0.064 4.064 19 C 0.039 3.961 20 C -0.202 4.202 21 C -0.228 4.228 22 C 0.018 3.982 23 C -0.060 4.060 24 O -0.570 6.570 25 Si 0.814 3.186 26 N -0.530 5.530 27 C -0.123 4.123 28 H 0.061 0.939 29 H 0.087 0.913 30 H 0.062 0.938 31 H 0.070 0.930 32 H 0.098 0.902 33 H 0.068 0.932 34 H 0.063 0.937 35 H 0.086 0.914 36 H 0.063 0.937 37 H 0.417 0.583 38 H 0.070 0.930 39 H 0.062 0.938 40 H 0.071 0.929 41 H 0.086 0.914 42 H 0.420 0.580 43 H 0.147 0.853 44 H 0.136 0.864 45 H 0.142 0.858 46 H 0.125 0.875 47 H 0.099 0.901 48 H 0.405 0.595 49 H -0.308 1.308 50 H -0.287 1.287 51 H 0.424 0.576 52 H 0.101 0.899 53 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.251 5.001 1.049 8.870 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.394 3.606 7 O -0.488 6.488 8 N -0.358 5.358 9 C 0.025 3.975 10 C -0.124 4.124 11 H 0.140 0.860 12 C -0.184 4.184 13 C 0.006 3.994 14 H 0.093 0.907 15 N -0.350 5.350 16 C 0.299 3.701 17 O -0.458 6.458 18 C -0.104 4.104 19 C -0.075 4.075 20 C -0.226 4.226 21 C -0.253 4.253 22 C -0.096 4.096 23 C -0.169 4.169 24 O -0.381 6.381 25 Si 0.719 3.281 26 N -0.126 5.126 27 C -0.161 4.161 28 H 0.080 0.920 29 H 0.105 0.895 30 H 0.081 0.919 31 H 0.089 0.911 32 H 0.117 0.883 33 H 0.087 0.913 34 H 0.082 0.918 35 H 0.105 0.895 36 H 0.082 0.918 37 H 0.253 0.747 38 H 0.089 0.911 39 H 0.080 0.920 40 H 0.089 0.911 41 H 0.104 0.896 42 H 0.258 0.742 43 H 0.165 0.835 44 H 0.154 0.846 45 H 0.159 0.841 46 H 0.143 0.857 47 H 0.116 0.884 48 H 0.257 0.743 49 H -0.237 1.237 50 H -0.215 1.215 51 H 0.262 0.738 52 H 0.119 0.881 53 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 6.145 3.805 0.537 7.248 hybrid contribution 0.261 0.364 -0.574 0.728 sum 6.406 4.169 -0.038 7.643 Atomic orbital electron populations 1.22476 0.94198 1.03630 1.03474 1.22345 0.94356 0.92631 0.81583 1.21891 1.02511 0.90843 1.04214 1.22471 1.01697 1.02211 0.97307 1.86306 1.71552 1.23337 1.47255 1.18407 0.78824 0.80801 0.82617 1.90911 1.42295 1.71056 1.44495 1.44723 1.55235 1.12921 1.22943 1.21417 0.99647 0.78186 0.98220 1.22812 1.01065 0.96559 0.91966 0.86041 1.23503 1.00763 0.97051 0.97110 1.21780 0.88085 0.97666 0.91895 0.90654 1.45494 1.09974 1.72663 1.06830 1.21035 0.91184 0.75051 0.82825 1.90783 1.32255 1.50457 1.72352 1.20277 0.95406 1.08316 0.86445 1.19963 1.08095 0.88300 0.91168 1.20797 1.09733 0.97870 0.94213 1.20729 1.11970 0.94738 0.97850 1.20134 1.08569 0.92242 0.88650 1.24596 0.91161 1.03086 0.98052 1.86476 1.44039 1.65031 1.42525 0.94483 0.76400 0.76055 0.81150 1.41850 1.53997 1.09384 1.07373 1.23256 1.04367 0.95451 0.93060 0.92037 0.89467 0.91871 0.91059 0.88342 0.91251 0.91829 0.89509 0.91802 0.74663 0.91126 0.91967 0.91056 0.89573 0.74188 0.83505 0.84576 0.84061 0.85742 0.88368 0.74279 1.23679 1.21466 0.73790 0.88097 0.88602 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.64 8.37 71.98 0.60 -0.04 16 2 C 0.13 0.36 1.13 -10.79 -0.01 0.35 16 3 C -0.14 0.32 8.85 71.98 0.64 0.95 16 4 C -0.18 -0.54 8.37 71.98 0.60 0.07 16 5 O -0.37 -1.90 9.94 -55.46 -0.55 -2.45 16 6 C 0.64 4.00 8.06 129.79 1.05 5.04 16 7 O -0.60 -7.17 11.88 19.81 0.24 -6.93 16 8 N -0.70 0.72 5.56 -590.84 -3.29 -2.57 16 9 C 0.15 -0.48 5.50 86.38 0.48 0.00 16 10 C -0.11 0.89 3.63 -10.27 -0.04 0.86 16 11 H 0.12 -1.52 8.14 -2.39 -0.02 -1.54 16 12 C -0.15 0.63 7.44 31.12 0.23 0.87 16 13 C 0.11 -0.32 4.32 45.52 0.20 -0.12 16 14 H 0.08 0.30 7.46 -2.39 -0.02 0.29 16 15 N -0.70 3.77 5.27 -440.02 -2.32 1.45 16 16 C 0.51 0.88 7.82 87.66 0.69 1.57 16 17 O -0.58 -8.24 15.63 -3.03 -0.05 -8.29 16 18 C -0.06 0.29 6.24 29.10 0.18 0.47 16 19 C 0.04 0.20 5.66 41.08 0.23 0.43 16 20 C -0.20 -1.98 10.76 22.14 0.24 -1.74 16 21 C -0.23 -2.72 9.37 22.14 0.21 -2.51 16 22 C 0.02 0.15 6.53 41.08 0.27 0.42 16 23 C -0.06 -0.09 3.07 71.24 0.22 0.12 16 24 O -0.57 -1.28 12.86 -148.98 -1.92 -3.19 16 25 Si 0.81 0.20 30.60 68.60 2.10 2.30 16 26 N -0.53 -2.76 6.08 -171.11 -1.04 -3.80 16 27 C -0.12 0.95 7.39 31.12 0.23 1.18 16 28 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 29 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 30 H 0.06 0.57 5.88 -2.39 -0.01 0.55 16 31 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 32 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 33 H 0.07 -0.17 8.14 -2.38 -0.02 -0.19 16 34 H 0.06 0.53 5.88 -2.39 -0.01 0.52 16 35 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 36 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 37 H 0.42 -2.39 8.58 -92.71 -0.80 -3.18 16 38 H 0.07 -0.14 8.14 -2.38 -0.02 -0.16 16 39 H 0.06 -0.02 7.88 -2.39 -0.02 -0.04 16 40 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 41 H 0.09 -0.20 7.92 -2.39 -0.02 -0.22 16 42 H 0.42 -5.45 8.70 -92.71 -0.81 -6.26 16 43 H 0.15 -1.47 8.14 -2.39 -0.02 -1.49 16 44 H 0.14 -1.55 8.14 -2.39 -0.02 -1.57 16 45 H 0.14 1.02 8.06 -2.91 -0.02 1.00 16 46 H 0.12 1.48 6.24 -2.91 -0.02 1.46 16 47 H 0.10 -0.41 7.96 -2.39 -0.02 -0.43 16 48 H 0.41 -3.75 8.74 -74.05 -0.65 -4.39 16 49 H -0.31 -3.03 7.11 99.48 0.71 -2.33 16 50 H -0.29 -1.58 7.11 99.48 0.71 -0.87 16 51 H 0.42 -0.04 8.96 -92.71 -0.83 -0.87 16 52 H 0.10 -0.71 8.10 -2.38 -0.02 -0.73 16 53 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 Total: 0.00 -34.94 430.77 -2.90 -37.84 By element: Atomic # 1 Polarization: -20.20 SS G_CDS: -2.08 Total: -22.28 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: 6.00 Total: 7.92 kcal Atomic # 7 Polarization: 1.72 SS G_CDS: -6.64 Total: -4.92 kcal Atomic # 8 Polarization: -18.58 SS G_CDS: -2.28 Total: -20.86 kcal Atomic # 14 Polarization: 0.20 SS G_CDS: 2.10 Total: 2.30 kcal Total: -34.94 -2.90 -37.84 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_14644196.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.553 kcal (2) G-P(sol) polarization free energy of solvation -34.936 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.489 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.900 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.836 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.389 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds