Wall clock time and date at job start Sat Mar 6 2021 20:00:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52998 * 109.46913 * 2 1 4 4 C 1.53000 * 109.47561 * 239.99444 * 2 1 3 5 5 O 1.45203 * 109.46576 * 119.99348 * 2 1 3 6 6 C 1.34636 * 117.00036 * 60.00603 * 5 2 1 7 7 O 1.21514 * 120.00070 * 359.97438 * 6 5 2 8 8 N 1.34783 * 120.00220 * 179.97438 * 6 5 2 9 9 C 1.46499 * 119.99918 * 180.02562 * 8 6 5 10 10 C 1.52998 * 109.46882 * 180.02562 * 9 8 6 11 11 H 1.08997 * 112.85474 * 43.80022 * 10 9 8 12 12 C 1.53781 * 113.61406 * 174.99788 * 10 9 8 13 13 C 1.53786 * 87.17350 * 140.02181 * 12 10 9 14 14 H 1.09000 * 113.61138 * 220.06261 * 13 12 10 15 15 N 1.46496 * 113.61518 * 89.15486 * 13 12 10 16 16 C 1.34779 * 119.99390 * 154.99856 * 15 13 12 17 17 O 1.21277 * 120.00682 * 0.02562 * 16 15 13 18 18 C 1.50703 * 119.99369 * 180.02562 * 16 15 13 19 19 C 1.53542 * 109.81918 * 279.13452 * 18 16 15 20 20 C 1.53042 * 108.56259 * 179.57602 * 19 18 16 21 21 C 1.50204 * 110.36351 * 49.47342 * 20 19 18 22 22 C 1.50696 * 118.54972 * 159.96751 * 21 20 19 23 23 O 1.42901 * 109.47057 * 70.02095 * 22 21 20 24 24 Si 1.86303 * 109.47425 * 190.02276 * 22 21 20 25 25 C 1.31119 * 122.90438 * 339.99168 * 21 20 19 26 26 N 1.38925 * 121.85141 * 0.40430 * 25 21 20 27 27 C 1.53782 * 113.68747 * 272.53320 * 10 9 8 28 28 H 1.08996 * 109.47737 * 300.00361 * 1 2 3 29 29 H 1.09004 * 109.46844 * 60.00561 * 1 2 3 30 30 H 1.09001 * 109.47319 * 180.02562 * 1 2 3 31 31 H 1.09011 * 109.46841 * 179.97438 * 3 2 1 32 32 H 1.08992 * 109.47224 * 299.99142 * 3 2 1 33 33 H 1.09001 * 109.47540 * 59.99638 * 3 2 1 34 34 H 1.08994 * 109.47095 * 300.00270 * 4 2 1 35 35 H 1.09001 * 109.46813 * 60.00578 * 4 2 1 36 36 H 1.09000 * 109.46922 * 179.97438 * 4 2 1 37 37 H 0.96999 * 119.99505 * 359.97438 * 8 6 5 38 38 H 1.08995 * 109.47324 * 59.99404 * 9 8 6 39 39 H 1.09003 * 109.46872 * 299.99751 * 9 8 6 40 40 H 1.09002 * 113.61445 * 254.61180 * 12 10 9 41 41 H 1.09002 * 113.61408 * 25.42911 * 12 10 9 42 42 H 0.97001 * 120.00117 * 335.00621 * 15 13 12 43 43 H 1.08994 * 109.81554 * 40.00152 * 18 16 15 44 44 H 1.09001 * 109.62605 * 299.23652 * 19 18 16 45 45 H 1.09002 * 109.62023 * 59.79556 * 19 18 16 46 46 H 1.09004 * 109.27416 * 289.22620 * 20 19 18 47 47 H 1.08996 * 109.20110 * 169.68271 * 20 19 18 48 48 H 1.09001 * 109.47208 * 310.02215 * 22 21 20 49 49 H 0.96707 * 113.99752 * 60.00597 * 23 22 21 50 50 H 1.48496 * 110.00174 * 179.97438 * 24 22 21 51 51 H 1.48497 * 110.00101 * 301.32208 * 24 22 21 52 52 H 1.08005 * 119.07696 * 180.42696 * 25 21 20 53 53 H 0.97001 * 120.55953 * 166.66127 * 26 25 21 54 54 H 1.08997 * 113.61668 * 334.55355 * 27 10 9 55 55 H 1.08998 * 113.61674 * 105.37864 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7214 -1.2491 5 8 2.0139 -0.6844 1.1857 6 6 1.6521 -1.9722 1.3385 7 8 0.9509 -2.5094 0.5042 8 7 2.0678 -2.6656 2.4170 9 6 1.6747 -4.0670 2.5829 10 6 2.2745 -4.6148 3.8794 11 1 2.1795 -3.9222 4.7156 12 6 1.8216 -6.0465 4.2110 13 6 3.2657 -6.3167 4.6655 14 1 3.6384 -7.2989 4.3748 15 7 3.5028 -6.0121 6.0787 16 6 4.4969 -6.6330 6.7442 17 8 5.1953 -7.4434 6.1731 18 6 4.7404 -6.3201 8.1981 19 6 5.5513 -5.0222 8.3226 20 6 5.7726 -4.7265 9.8078 21 6 6.2913 -5.9475 10.5122 22 6 6.9978 -5.7721 11.8317 23 8 6.0529 -5.3805 12.8296 24 14 7.7946 -7.3813 12.3283 25 6 6.1570 -7.1592 10.0296 26 7 5.5256 -7.3990 8.8156 27 6 3.6922 -5.1864 3.7111 28 1 -0.3634 0.5138 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3634 -1.0277 0.0005 31 1 3.1300 1.4425 0.0005 32 1 1.6767 1.9562 -0.8900 33 1 1.6766 1.9564 0.8899 34 1 1.6768 -1.7490 -1.2491 35 1 1.6769 -0.2075 -2.1392 36 1 3.1301 -0.7209 -1.2493 37 1 2.6279 -2.2368 3.0828 38 1 2.0412 -4.6497 1.7379 39 1 0.5878 -4.1365 2.6281 40 1 1.0925 -6.0976 5.0197 41 1 1.5240 -6.6241 3.3358 42 1 2.9443 -5.3637 6.5355 43 1 3.7882 -6.2123 8.7174 44 1 6.5146 -5.1434 7.8270 45 1 5.0009 -4.2013 7.8631 46 1 4.8276 -4.4239 10.2591 47 1 6.4959 -3.9174 9.9083 48 1 7.7635 -5.0024 11.7344 49 1 5.3412 -6.0200 12.9698 50 1 8.4952 -7.2214 13.6278 51 1 6.7653 -8.4465 12.4334 52 1 6.5480 -7.9945 10.5918 53 1 5.6018 -8.2636 8.3824 54 1 3.9074 -5.5293 2.6991 55 1 4.4734 -4.5425 4.1150 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_15413834.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:00:40 Heat of formation + Delta-G solvation = -105.769212 kcal Electronic energy + Delta-G solvation = -33528.843638 eV Core-core repulsion = 28954.386549 eV Total energy + Delta-G solvation = -4574.457088 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.219 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -41.87545 -41.58233 -40.34256 -39.21393 -38.28617 -37.43633 -35.95249 -35.00476 -34.24197 -33.20456 -32.76020 -29.19007 -28.38182 -28.31133 -27.41565 -26.69496 -25.45663 -24.33694 -23.60222 -22.85486 -21.98243 -21.23667 -20.29052 -19.42608 -19.13084 -19.02271 -18.11633 -17.68019 -17.32098 -17.24368 -16.77620 -16.56948 -16.27372 -16.07577 -15.82343 -15.74984 -15.63070 -15.34737 -15.19881 -14.97860 -14.86684 -14.47440 -14.44158 -14.08149 -13.96439 -13.87453 -13.45160 -13.36635 -13.22706 -12.99675 -12.96161 -12.92634 -12.89825 -12.87199 -12.46836 -12.38452 -12.35379 -12.00866 -11.94742 -11.65321 -11.63831 -11.40860 -11.30199 -11.24271 -11.11255 -10.89595 -10.29307 -10.22753 -10.10181 -8.45403 -4.88942 1.17602 1.33766 1.41130 1.46294 1.56676 1.75337 1.87297 1.98923 2.64771 3.11879 3.45032 3.52908 3.58170 3.59889 3.73321 3.75365 3.78376 3.79150 3.84951 3.90971 3.93415 4.05671 4.25972 4.32252 4.46835 4.48651 4.54870 4.59846 4.61234 4.63985 4.71818 4.73883 4.75199 4.78906 4.79152 4.81629 4.85475 4.86430 4.86505 5.00083 5.05260 5.06725 5.10452 5.17207 5.25309 5.25689 5.26861 5.31458 5.35992 5.56499 5.59082 5.60814 6.25405 6.39144 6.46515 6.65377 6.82669 7.12136 7.33747 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.640 3.360 7 O -0.597 6.597 8 N -0.698 5.698 9 C 0.147 3.853 10 C -0.109 4.109 11 H 0.119 0.881 12 C -0.124 4.124 13 C 0.114 3.886 14 H 0.084 0.916 15 N -0.693 5.693 16 C 0.516 3.484 17 O -0.572 6.572 18 C 0.138 3.862 19 C -0.120 4.120 20 C -0.052 4.052 21 C -0.282 4.282 22 C -0.054 4.054 23 O -0.556 6.556 24 Si 0.741 3.259 25 C 0.137 3.863 26 N -0.737 5.737 27 C -0.145 4.145 28 H 0.062 0.938 29 H 0.086 0.914 30 H 0.063 0.937 31 H 0.069 0.931 32 H 0.098 0.902 33 H 0.070 0.930 34 H 0.063 0.937 35 H 0.086 0.914 36 H 0.061 0.939 37 H 0.417 0.583 38 H 0.064 0.936 39 H 0.069 0.931 40 H 0.093 0.907 41 H 0.103 0.897 42 H 0.419 0.581 43 H 0.109 0.891 44 H 0.061 0.939 45 H 0.101 0.899 46 H 0.069 0.931 47 H 0.073 0.927 48 H 0.111 0.889 49 H 0.382 0.618 50 H -0.311 1.311 51 H -0.284 1.284 52 H 0.140 0.860 53 H 0.407 0.593 54 H 0.089 0.911 55 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.844 2.746 -0.114 3.309 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.393 3.607 7 O -0.488 6.488 8 N -0.358 5.358 9 C 0.025 3.975 10 C -0.127 4.127 11 H 0.137 0.863 12 C -0.162 4.162 13 C 0.008 3.992 14 H 0.102 0.898 15 N -0.345 5.345 16 C 0.302 3.698 17 O -0.450 6.450 18 C 0.029 3.971 19 C -0.159 4.159 20 C -0.089 4.089 21 C -0.292 4.292 22 C -0.165 4.165 23 O -0.364 6.364 24 Si 0.649 3.351 25 C 0.016 3.984 26 N -0.370 5.370 27 C -0.183 4.183 28 H 0.081 0.919 29 H 0.105 0.895 30 H 0.082 0.918 31 H 0.088 0.912 32 H 0.116 0.884 33 H 0.089 0.911 34 H 0.082 0.918 35 H 0.105 0.895 36 H 0.080 0.920 37 H 0.254 0.746 38 H 0.082 0.918 39 H 0.087 0.913 40 H 0.112 0.888 41 H 0.121 0.879 42 H 0.256 0.744 43 H 0.127 0.873 44 H 0.080 0.920 45 H 0.119 0.881 46 H 0.088 0.912 47 H 0.091 0.909 48 H 0.129 0.871 49 H 0.231 0.769 50 H -0.240 1.240 51 H -0.211 1.211 52 H 0.157 0.843 53 H 0.243 0.757 54 H 0.107 0.893 55 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -1.360 1.958 -0.412 2.419 hybrid contribution -0.966 0.005 0.659 1.169 sum -2.326 1.963 0.247 3.053 Atomic orbital electron populations 1.22470 0.94014 1.03678 1.03522 1.22338 0.94474 0.92570 0.81515 1.21891 1.02436 0.90901 1.04257 1.22473 1.01602 1.02238 0.97430 1.86307 1.71566 1.23394 1.47190 1.18415 0.78837 0.80787 0.82627 1.90911 1.42395 1.71054 1.44426 1.44736 1.55154 1.12844 1.23088 1.21424 1.00000 0.78095 0.97954 1.22829 0.95749 0.97215 0.96918 0.86255 1.23265 0.95208 0.94872 1.02870 1.21855 0.97726 0.99107 0.80531 0.89783 1.45482 1.33769 1.44242 1.10988 1.20851 0.79681 0.80067 0.89165 1.90731 1.48175 1.35929 1.70204 1.21106 0.97120 0.89654 0.89222 1.21843 1.00469 0.95519 0.98030 1.19948 1.01119 0.95365 0.92450 1.20913 1.13241 0.94285 1.00790 1.24825 0.94466 1.10763 0.86449 1.86547 1.41037 1.49718 1.59105 0.94444 0.82717 0.74579 0.83317 1.20597 0.93902 0.96743 0.87113 1.44388 1.55786 1.15020 1.21772 1.23542 0.96948 0.97646 1.00190 0.91856 0.89545 0.91800 0.91221 0.88383 0.91104 0.91824 0.89520 0.91999 0.74643 0.91811 0.91288 0.88843 0.87863 0.74356 0.87340 0.92019 0.88093 0.91219 0.90872 0.87080 0.76935 1.24014 1.21101 0.84281 0.75655 0.89271 0.90890 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.47 8.37 71.98 0.60 0.13 16 2 C 0.13 0.31 1.13 -10.79 -0.01 0.30 16 3 C -0.14 0.36 8.85 71.98 0.64 0.99 16 4 C -0.18 -0.54 8.37 71.98 0.60 0.07 16 5 O -0.37 -1.70 9.94 -55.46 -0.55 -2.25 16 6 C 0.64 3.52 8.06 129.79 1.05 4.57 16 7 O -0.60 -6.72 11.88 19.80 0.24 -6.48 16 8 N -0.70 1.36 5.56 -590.84 -3.29 -1.92 16 9 C 0.15 -0.66 5.51 86.38 0.48 -0.18 16 10 C -0.11 1.08 3.63 -10.27 -0.04 1.05 16 11 H 0.12 -1.61 8.14 -2.39 -0.02 -1.63 16 12 C -0.12 1.21 7.38 31.12 0.23 1.44 16 13 C 0.11 -0.65 4.33 45.58 0.20 -0.45 16 14 H 0.08 -0.02 7.47 -2.39 -0.02 -0.04 16 15 N -0.69 5.13 5.27 -439.74 -2.32 2.82 16 16 C 0.52 -0.65 7.09 87.66 0.62 -0.02 16 17 O -0.57 -4.52 15.68 -3.02 -0.05 -4.57 16 18 C 0.14 -0.58 3.36 44.33 0.15 -0.43 16 19 C -0.12 0.60 5.48 30.79 0.17 0.77 16 20 C -0.05 0.16 5.85 29.71 0.17 0.33 16 21 C -0.28 0.37 5.37 -16.76 -0.09 0.28 16 22 C -0.05 0.01 2.81 71.23 0.20 0.21 16 23 O -0.56 -1.65 12.88 -148.98 -1.92 -3.57 16 24 Si 0.74 -0.47 29.97 68.60 2.06 1.59 16 25 C 0.14 -0.22 9.61 83.41 0.80 0.58 16 26 N -0.74 0.90 5.47 -328.99 -1.80 -0.90 16 27 C -0.14 0.98 7.44 31.18 0.23 1.21 16 28 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 29 H 0.09 -0.06 8.14 -2.38 -0.02 -0.08 16 30 H 0.06 0.51 5.88 -2.39 -0.01 0.49 16 31 H 0.07 -0.19 8.14 -2.38 -0.02 -0.21 16 32 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 33 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 34 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 35 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 36 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 37 H 0.42 -2.75 8.58 -92.71 -0.80 -3.55 16 38 H 0.06 -0.12 7.85 -2.39 -0.02 -0.14 16 39 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 40 H 0.09 -1.09 8.14 -2.39 -0.02 -1.11 16 41 H 0.10 -0.96 8.10 -2.39 -0.02 -0.98 16 42 H 0.42 -5.69 8.70 -92.71 -0.81 -6.50 16 43 H 0.11 -0.86 8.14 -2.39 -0.02 -0.88 16 44 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 45 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 46 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 47 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 48 H 0.11 -0.07 7.96 -2.39 -0.02 -0.09 16 49 H 0.38 -1.05 8.70 -74.05 -0.64 -1.69 16 50 H -0.31 -2.48 7.11 99.48 0.71 -1.78 16 51 H -0.28 -0.68 6.82 99.48 0.68 -0.01 16 52 H 0.14 -0.48 4.31 -2.91 -0.01 -0.49 16 53 H 0.41 -0.06 8.10 -92.71 -0.75 -0.81 16 54 H 0.09 -0.45 7.90 -2.39 -0.02 -0.47 16 55 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 Total: 0.00 -23.07 432.92 -3.68 -26.75 By element: Atomic # 1 Polarization: -20.21 SS G_CDS: -2.06 Total: -22.27 kcal Atomic # 6 Polarization: 4.81 SS G_CDS: 6.00 Total: 10.81 kcal Atomic # 7 Polarization: 7.39 SS G_CDS: -7.40 Total: -0.01 kcal Atomic # 8 Polarization: -14.58 SS G_CDS: -2.28 Total: -16.87 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: 2.06 Total: 1.59 kcal Total: -23.07 -3.68 -26.75 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_15413834.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.020 kcal (2) G-P(sol) polarization free energy of solvation -23.065 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.085 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.684 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.749 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds