Wall clock time and date at job start Sat Mar 6 2021 20:00:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47089 * 2 1 4 4 C 1.52998 * 109.47091 * 119.99924 * 2 1 3 5 5 O 1.45198 * 109.47338 * 240.00011 * 2 1 3 6 6 C 1.34641 * 116.99942 * 59.99794 * 5 2 1 7 7 O 1.21509 * 119.99682 * 0.02562 * 6 5 2 8 8 N 1.34775 * 119.99910 * 180.02562 * 6 5 2 9 9 C 1.46497 * 119.99995 * 179.97438 * 8 6 5 10 10 C 1.52999 * 109.47285 * 180.02562 * 9 8 6 11 11 H 1.08994 * 112.85538 * 45.32983 * 10 9 8 12 12 C 1.53784 * 113.61687 * 176.53313 * 10 9 8 13 13 C 1.53777 * 87.08431 * 139.97522 * 12 10 9 14 14 H 1.08995 * 113.61652 * 219.93055 * 13 12 10 15 15 N 1.46501 * 113.61275 * 89.11127 * 13 12 10 16 16 C 1.34782 * 120.00052 * 154.99888 * 15 13 12 17 17 O 1.21288 * 119.99428 * 354.98497 * 16 15 13 18 18 C 1.50696 * 120.00436 * 174.98601 * 16 15 13 19 19 C 1.53036 * 109.33137 * 219.06696 * 18 16 15 20 20 C 1.53455 * 108.61158 * 190.01667 * 19 18 16 21 21 N 1.47033 * 107.50908 * 61.19078 * 20 19 18 22 22 C 1.38924 * 118.88113 * 316.25027 * 21 20 19 23 23 C 1.31110 * 121.85082 * 13.33186 * 22 21 20 24 24 C 1.50705 * 118.54897 * 179.57481 * 23 22 21 25 25 O 1.42900 * 109.46845 * 103.61129 * 24 23 22 26 26 Si 1.86298 * 109.47044 * 343.60896 * 24 23 22 27 27 C 1.53783 * 113.61192 * 274.13437 * 10 9 8 28 28 H 1.09003 * 109.47147 * 60.00283 * 1 2 3 29 29 H 1.08997 * 109.47336 * 299.99863 * 1 2 3 30 30 H 1.08999 * 109.47223 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.46919 * 59.99882 * 3 2 1 32 32 H 1.09004 * 109.46871 * 180.02562 * 3 2 1 33 33 H 1.09003 * 109.46894 * 299.99871 * 3 2 1 34 34 H 1.08991 * 109.47253 * 60.00161 * 4 2 1 35 35 H 1.09004 * 109.47159 * 179.97438 * 4 2 1 36 36 H 1.08999 * 109.47310 * 299.99771 * 4 2 1 37 37 H 0.97002 * 120.00124 * 0.02562 * 8 6 5 38 38 H 1.09005 * 109.47233 * 300.00179 * 9 8 6 39 39 H 1.09001 * 109.47382 * 60.00275 * 9 8 6 40 40 H 1.08998 * 113.60838 * 254.52783 * 12 10 9 41 41 H 1.09000 * 113.61515 * 25.34159 * 12 10 9 42 42 H 0.97000 * 120.00637 * 335.00538 * 15 13 12 43 43 H 1.09004 * 109.32671 * 338.71922 * 18 16 15 44 44 H 1.09000 * 109.62268 * 309.89188 * 19 18 16 45 45 H 1.09001 * 109.61942 * 70.44389 * 19 18 16 46 46 H 1.09000 * 109.97403 * 301.65702 * 20 19 18 47 47 H 1.09003 * 109.87368 * 180.66769 * 20 19 18 48 48 H 0.96997 * 120.55785 * 136.21818 * 21 20 19 49 49 H 1.08007 * 119.07485 * 193.31126 * 22 21 20 50 50 H 1.08999 * 109.47075 * 223.61207 * 24 23 22 51 51 H 0.96699 * 114.00032 * 300.00059 * 25 24 23 52 52 H 1.48493 * 110.00182 * 179.97438 * 26 24 23 53 53 H 1.48502 * 110.00041 * 301.32211 * 26 24 23 54 54 H 1.08996 * 113.61669 * 334.57042 * 27 10 9 55 55 H 1.09000 * 113.61274 * 105.46957 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7212 1.2492 5 8 2.0140 -0.6845 -1.1855 6 6 1.6522 -0.1729 -2.3772 7 8 0.9516 0.8187 -2.4252 8 7 2.0672 -0.7606 -3.5169 9 6 1.6731 -0.2043 -4.8135 10 6 2.2723 -1.0536 -5.9363 11 1 2.1540 -2.1237 -5.7668 12 6 1.8480 -0.6022 -7.3438 13 6 3.2940 -0.8839 -7.7847 14 1 3.6913 -0.1428 -8.4781 15 7 3.5121 -2.2603 -8.2365 16 6 4.5147 -2.5373 -9.0937 17 8 5.1785 -1.6366 -9.5617 18 6 4.8107 -3.9660 -9.4706 19 6 6.3258 -4.1628 -9.5601 20 6 6.6052 -5.5368 -10.1838 21 7 6.0212 -5.5371 -11.5331 22 6 4.7520 -5.0021 -11.7151 23 6 4.1692 -4.2746 -10.7932 24 6 2.7949 -3.7230 -11.0731 25 8 1.8202 -4.4905 -10.3639 26 14 2.4488 -3.8163 -12.9013 27 6 3.7044 -0.6454 -6.3202 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 1.6766 1.9563 0.8900 32 1 3.1300 1.4425 -0.0005 33 1 1.6766 1.9564 -0.8900 34 1 1.6767 -1.7488 1.2493 35 1 3.1300 -0.7216 1.2490 36 1 1.6767 -0.2074 2.1392 37 1 2.6263 -1.5524 -3.4785 38 1 0.5862 -0.2087 -4.8956 39 1 2.0396 0.8189 -4.8965 40 1 1.1135 -1.2590 -7.8099 41 1 1.5703 0.4504 -7.3996 42 1 2.9350 -2.9724 -7.9189 43 1 4.4049 -4.6317 -8.7087 44 1 6.7603 -3.3809 -10.1829 45 1 6.7598 -4.1221 -8.5610 46 1 6.1444 -6.3197 -9.5815 47 1 7.6806 -5.7035 -10.2465 48 1 6.5139 -5.9043 -12.2837 49 1 4.2310 -5.1905 -12.6423 50 1 2.7470 -2.6841 -10.7468 51 1 1.8061 -5.4271 -10.6042 52 1 1.0962 -3.2760 -13.1904 53 1 3.4743 -3.0484 -13.6522 54 1 3.9367 0.3957 -6.0959 55 1 4.4666 -1.3369 -5.9612 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_15608500.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:00:43 Heat of formation + Delta-G solvation = -109.034865 kcal Electronic energy + Delta-G solvation = -34400.520245 eV Core-core repulsion = 29825.921547 eV Total energy + Delta-G solvation = -4574.598698 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.219 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -41.90244 -41.62539 -40.36747 -38.99945 -38.26820 -37.42268 -35.95616 -34.98311 -34.18879 -33.16118 -32.68864 -29.16915 -28.39202 -28.32059 -27.18164 -26.74992 -26.03196 -24.18449 -23.18119 -22.87760 -22.04171 -21.24093 -20.27990 -19.22197 -19.13503 -18.91240 -18.16096 -17.68929 -17.34722 -17.13958 -17.06066 -16.68596 -16.38650 -15.99733 -15.83519 -15.76243 -15.40560 -15.32526 -15.03917 -14.92997 -14.65710 -14.49131 -14.38237 -14.18374 -14.12106 -13.75653 -13.49839 -13.37583 -13.26169 -13.23414 -12.98521 -12.93736 -12.88487 -12.59081 -12.48258 -12.36693 -12.35642 -12.04398 -11.98376 -11.85143 -11.67609 -11.42328 -11.34665 -11.32478 -11.13136 -10.77570 -10.24863 -10.21232 -10.05190 -8.41761 -5.07889 1.14908 1.26682 1.37944 1.60311 1.62962 1.73214 1.99433 2.20862 2.69492 3.08944 3.40928 3.54980 3.56755 3.70221 3.72399 3.76495 3.77513 3.80347 3.87772 3.92387 3.95122 4.19182 4.20953 4.35436 4.39691 4.44842 4.51424 4.56440 4.58352 4.59044 4.66650 4.70764 4.73235 4.74086 4.75788 4.78796 4.81421 4.83722 4.85545 4.88080 4.95974 5.02692 5.07894 5.15792 5.21652 5.24692 5.24743 5.27761 5.34407 5.47103 5.56480 5.60984 6.34786 6.36847 6.53410 6.95676 6.99907 7.24577 7.31405 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.180 4.180 4 C -0.137 4.137 5 O -0.370 6.370 6 C 0.641 3.359 7 O -0.596 6.596 8 N -0.698 5.698 9 C 0.149 3.851 10 C -0.104 4.104 11 H 0.117 0.883 12 C -0.127 4.127 13 C 0.109 3.891 14 H 0.076 0.924 15 N -0.699 5.699 16 C 0.525 3.475 17 O -0.589 6.589 18 C -0.030 4.030 19 C -0.128 4.128 20 C 0.125 3.875 21 N -0.746 5.746 22 C 0.166 3.834 23 C -0.299 4.299 24 C -0.044 4.044 25 O -0.553 6.553 26 Si 0.764 3.236 27 C -0.141 4.141 28 H 0.062 0.938 29 H 0.087 0.913 30 H 0.063 0.937 31 H 0.087 0.913 32 H 0.061 0.939 33 H 0.062 0.938 34 H 0.070 0.930 35 H 0.069 0.931 36 H 0.098 0.902 37 H 0.417 0.583 38 H 0.069 0.931 39 H 0.065 0.935 40 H 0.085 0.915 41 H 0.102 0.898 42 H 0.415 0.585 43 H 0.108 0.892 44 H 0.052 0.948 45 H 0.083 0.917 46 H 0.078 0.922 47 H 0.098 0.902 48 H 0.414 0.586 49 H 0.155 0.845 50 H 0.075 0.925 51 H 0.394 0.606 52 H -0.306 1.306 53 H -0.304 1.304 54 H 0.090 0.910 55 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.490 -10.079 0.708 10.213 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.238 4.238 4 C -0.194 4.194 5 O -0.284 6.284 6 C 0.394 3.606 7 O -0.487 6.487 8 N -0.358 5.358 9 C 0.027 3.973 10 C -0.123 4.123 11 H 0.135 0.865 12 C -0.165 4.165 13 C 0.003 3.997 14 H 0.095 0.905 15 N -0.350 5.350 16 C 0.313 3.687 17 O -0.469 6.469 18 C -0.051 4.051 19 C -0.167 4.167 20 C 0.000 4.000 21 N -0.376 5.376 22 C 0.044 3.956 23 C -0.310 4.310 24 C -0.155 4.155 25 O -0.361 6.361 26 Si 0.673 3.327 27 C -0.179 4.179 28 H 0.081 0.919 29 H 0.105 0.895 30 H 0.082 0.918 31 H 0.106 0.894 32 H 0.080 0.920 33 H 0.081 0.919 34 H 0.089 0.911 35 H 0.088 0.912 36 H 0.117 0.883 37 H 0.253 0.747 38 H 0.087 0.913 39 H 0.083 0.917 40 H 0.104 0.896 41 H 0.121 0.879 42 H 0.253 0.747 43 H 0.126 0.874 44 H 0.071 0.929 45 H 0.101 0.899 46 H 0.096 0.904 47 H 0.116 0.884 48 H 0.250 0.750 49 H 0.172 0.828 50 H 0.092 0.908 51 H 0.244 0.756 52 H -0.235 1.235 53 H -0.232 1.232 54 H 0.109 0.891 55 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 1.365 -7.960 0.146 8.077 hybrid contribution 0.240 0.431 0.190 0.529 sum 1.605 -7.528 0.336 7.705 Atomic orbital electron populations 1.22471 0.94014 1.02973 1.04247 1.22353 0.94492 0.92440 0.81652 1.22478 1.01599 0.95434 1.04244 1.21889 1.02437 1.01283 0.93835 1.86308 1.71562 1.56618 1.13949 1.18381 0.78806 0.81531 0.81847 1.90909 1.42386 1.27987 1.87445 1.44710 1.55225 1.33033 1.02846 1.21385 0.99940 0.97145 0.78807 1.22763 0.95674 1.00937 0.92926 0.86544 1.23255 0.95360 1.03626 0.94286 1.21849 0.97763 0.84347 0.95780 0.90540 1.45707 1.32971 1.09663 1.46656 1.21109 0.78874 0.91937 0.76809 1.90677 1.51595 1.49656 1.54968 1.19661 0.96746 0.91475 0.97251 1.21799 0.93727 0.98897 1.02292 1.21662 0.99689 0.95253 0.83363 1.44697 1.15929 1.66507 1.10481 1.20565 0.86238 0.91685 0.97159 1.20396 0.99763 1.11845 0.99029 1.24642 0.87090 0.95710 1.08066 1.86410 1.56674 1.25849 1.67197 0.94731 0.75364 0.89094 0.73535 1.23513 0.96844 1.02663 0.94897 0.91873 0.89459 0.91839 0.89439 0.91999 0.91892 0.91084 0.91212 0.88307 0.74652 0.91314 0.91691 0.89603 0.87914 0.74720 0.87410 0.92908 0.89868 0.90363 0.88400 0.74964 0.82828 0.90785 0.75577 1.23477 1.23232 0.89105 0.90760 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.67 8.37 71.98 0.60 -0.07 16 2 C 0.13 0.45 1.13 -10.79 -0.01 0.44 16 3 C -0.18 -0.73 8.37 71.98 0.60 -0.13 16 4 C -0.14 0.24 8.85 71.98 0.64 0.88 16 5 O -0.37 -2.24 9.94 -55.50 -0.55 -2.79 16 6 C 0.64 4.72 8.06 129.79 1.05 5.77 16 7 O -0.60 -7.76 11.88 19.81 0.24 -7.53 16 8 N -0.70 -0.39 5.56 -590.85 -3.29 -3.67 16 9 C 0.15 -0.17 5.50 86.38 0.47 0.30 16 10 C -0.10 0.55 3.62 -10.27 -0.04 0.51 16 11 H 0.12 -0.96 8.14 -2.39 -0.02 -0.98 16 12 C -0.13 0.45 7.39 31.12 0.23 0.68 16 13 C 0.11 0.09 4.36 45.57 0.20 0.29 16 14 H 0.08 0.52 7.42 -2.39 -0.02 0.50 16 15 N -0.70 -0.24 5.18 -439.76 -2.28 -2.51 16 16 C 0.52 3.06 5.17 87.65 0.45 3.51 16 17 O -0.59 -9.20 15.74 -3.05 -0.05 -9.24 16 18 C -0.03 0.00 2.70 -12.43 -0.03 -0.03 16 19 C -0.13 0.08 5.32 30.76 0.16 0.24 16 20 C 0.12 -0.81 7.16 86.43 0.62 -0.19 16 21 N -0.75 4.59 5.83 -346.03 -2.02 2.58 16 22 C 0.17 -0.70 9.60 83.42 0.80 0.10 16 23 C -0.30 0.23 4.97 -16.75 -0.08 0.14 16 24 C -0.04 -0.02 2.53 71.24 0.18 0.16 16 25 O -0.55 1.52 12.88 -148.98 -1.92 -0.39 16 26 Si 0.76 -0.18 29.81 68.60 2.04 1.86 16 27 C -0.14 0.32 7.44 31.18 0.23 0.55 16 28 H 0.06 0.58 5.88 -2.39 -0.01 0.57 16 29 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 30 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 31 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 32 H 0.06 0.21 8.14 -2.38 -0.02 0.19 16 33 H 0.06 0.60 5.88 -2.39 -0.01 0.59 16 34 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 35 H 0.07 -0.13 8.14 -2.38 -0.02 -0.15 16 36 H 0.10 -0.50 8.14 -2.39 -0.02 -0.51 16 37 H 0.42 -1.68 8.58 -92.71 -0.80 -2.48 16 38 H 0.07 0.03 8.14 -2.38 -0.02 0.01 16 39 H 0.06 0.07 7.88 -2.39 -0.02 0.06 16 40 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 41 H 0.10 -0.39 8.10 -2.39 -0.02 -0.41 16 42 H 0.42 -1.75 8.66 -92.71 -0.80 -2.56 16 43 H 0.11 -0.48 8.09 -2.38 -0.02 -0.50 16 44 H 0.05 0.33 7.53 -2.39 -0.02 0.32 16 45 H 0.08 -0.20 8.14 -2.39 -0.02 -0.22 16 46 H 0.08 -0.68 8.14 -2.39 -0.02 -0.70 16 47 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 48 H 0.41 -4.14 8.96 -92.71 -0.83 -4.97 16 49 H 0.16 -1.38 4.69 -2.91 -0.01 -1.40 16 50 H 0.07 0.48 6.59 -2.39 -0.02 0.46 16 51 H 0.39 -4.40 8.70 -74.06 -0.64 -5.05 16 52 H -0.31 -2.40 7.11 99.48 0.71 -1.69 16 53 H -0.30 -2.23 7.11 99.48 0.71 -1.52 16 54 H 0.09 -0.12 7.92 -2.39 -0.02 -0.14 16 55 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 Total: 0.00 -26.70 430.43 -3.84 -30.54 By element: Atomic # 1 Polarization: -19.88 SS G_CDS: -2.10 Total: -21.98 kcal Atomic # 6 Polarization: 7.07 SS G_CDS: 6.07 Total: 13.14 kcal Atomic # 7 Polarization: 3.97 SS G_CDS: -7.58 Total: -3.61 kcal Atomic # 8 Polarization: -17.67 SS G_CDS: -2.28 Total: -19.95 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: 2.04 Total: 1.86 kcal Total: -26.70 -3.84 -30.54 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_15608500.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.490 kcal (2) G-P(sol) polarization free energy of solvation -26.701 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.192 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.843 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.544 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.035 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds