Wall clock time and date at job start Sat Mar 6 2021 20:02:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.37639 * 125.67757 * 2 1 4 4 C 1.46666 * 126.22572 * 0.04032 * 3 2 1 5 5 O 1.21697 * 119.99944 * 4.93162 * 4 3 2 6 6 N 1.34778 * 120.00395 * 184.66509 * 4 3 2 7 7 C 1.46500 * 120.00539 * 175.17908 * 6 4 3 8 8 H 1.08998 * 112.84474 * 334.66285 * 7 6 4 9 9 C 1.53784 * 113.61454 * 105.85970 * 7 6 4 10 10 C 1.54046 * 86.98351 * 89.16163 * 9 7 6 11 11 H 1.08991 * 113.61703 * 270.88617 * 10 9 7 12 12 C 1.53007 * 113.69121 * 139.98637 * 10 9 7 13 13 N 1.46496 * 109.46789 * 87.46992 * 12 10 9 14 14 C 1.34775 * 120.00092 * 179.97438 * 13 12 10 15 15 O 1.21517 * 120.00028 * 0.02562 * 14 13 12 16 16 O 1.34640 * 120.00466 * 179.97438 * 14 13 12 17 17 C 1.45199 * 117.00279 * 180.02562 * 16 14 13 18 18 C 1.52993 * 109.47160 * 60.00112 * 17 16 14 19 19 C 1.52996 * 109.47302 * 180.02562 * 17 16 14 20 20 C 1.53007 * 109.46991 * 300.00204 * 17 16 14 21 21 C 1.53773 * 113.61546 * 203.46875 * 7 6 4 22 22 C 1.37889 * 107.54901 * 180.30118 * 3 2 1 23 23 C 1.39876 * 107.09315 * 359.58399 * 22 3 2 24 24 Br 1.89095 * 126.07435 * 180.16139 * 23 22 3 25 25 C 1.35509 * 107.84987 * 0.42173 * 23 22 3 26 26 C 1.50703 * 125.56857 * 179.74317 * 25 23 22 27 27 O 1.42905 * 109.46632 * 245.85887 * 26 25 23 28 28 Si 1.86297 * 109.47263 * 125.86337 * 26 25 23 29 29 H 1.09002 * 109.47530 * 84.40337 * 1 2 3 30 30 H 1.09007 * 109.47553 * 204.40020 * 1 2 3 31 31 H 1.08998 * 109.47427 * 324.40321 * 1 2 3 32 32 H 0.97003 * 119.99445 * 355.17426 * 6 4 3 33 33 H 1.08994 * 113.61041 * 203.66637 * 9 7 6 34 34 H 1.09004 * 113.61322 * 334.56975 * 9 7 6 35 35 H 1.09008 * 109.46780 * 207.46490 * 12 10 9 36 36 H 1.08993 * 109.47522 * 327.46748 * 12 10 9 37 37 H 0.96998 * 120.00384 * 0.02562 * 13 12 10 38 38 H 1.08998 * 109.47321 * 60.00242 * 18 17 16 39 39 H 1.09003 * 109.47426 * 180.02562 * 18 17 16 40 40 H 1.09005 * 109.47613 * 299.99891 * 18 17 16 41 41 H 1.09006 * 109.47320 * 59.99274 * 19 17 16 42 42 H 1.08994 * 109.47155 * 179.97438 * 19 17 16 43 43 H 1.09001 * 109.46857 * 300.00119 * 19 17 16 44 44 H 1.09004 * 109.46961 * 59.99987 * 20 17 16 45 45 H 1.08994 * 109.47072 * 179.97438 * 20 17 16 46 46 H 1.09006 * 109.46655 * 300.00129 * 20 17 16 47 47 H 1.09002 * 113.61750 * 25.43139 * 21 7 6 48 48 H 1.09006 * 113.61537 * 156.33431 * 21 7 6 49 49 H 1.07995 * 126.45161 * 179.73918 * 22 3 2 50 50 H 1.08997 * 109.47536 * 5.85729 * 26 25 23 51 51 H 0.96692 * 114.00182 * 299.99871 * 27 26 25 52 52 H 1.48501 * 109.99973 * 184.88031 * 28 26 25 53 53 H 1.48499 * 109.99922 * 306.19535 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5122 0.0008 5 8 0.6251 2.7643 0.0922 6 7 2.7085 3.5142 -0.0942 7 6 2.2485 4.9011 -0.1998 8 1 1.2472 4.9838 -0.6226 9 6 2.4412 5.7140 1.0913 10 6 3.8382 6.0805 0.5555 11 1 4.6150 5.3711 0.8404 12 6 4.2356 7.5344 0.8185 13 7 4.8687 7.6369 2.1357 14 6 5.3036 8.8314 2.5832 15 8 5.1702 9.8236 1.8944 16 8 5.8850 8.9258 3.7940 17 6 6.3287 10.2438 4.2113 18 6 5.1311 11.1949 4.2552 19 6 6.9595 10.1529 5.6022 20 6 7.3635 10.7725 3.2160 21 6 3.2734 5.8418 -0.8549 22 6 3.5781 0.6890 -0.0069 23 6 3.5529 -0.7095 -0.0014 24 35 5.0609 -1.8504 -0.0025 25 6 2.2557 -1.1015 -0.0009 26 6 1.7713 -2.5286 -0.0011 27 8 1.0958 -2.8020 -1.2304 28 14 0.5979 -2.7863 1.4227 29 1 -0.3634 0.1002 -1.0228 30 1 -0.3634 -0.9359 0.4245 31 1 -0.3634 0.8356 0.5982 32 1 3.6582 3.3170 -0.0926 33 1 1.7679 6.5671 1.1746 34 1 2.4645 5.1022 1.9931 35 1 4.9369 7.8638 0.0517 36 1 3.3466 8.1645 0.7927 37 1 4.9755 6.8449 2.6854 38 1 4.3938 10.8183 4.9643 39 1 5.4642 12.1845 4.5681 40 1 4.6819 11.2597 3.2641 41 1 7.8128 9.4753 5.5706 42 1 7.2930 11.1422 5.9153 43 1 6.2226 9.7760 6.3115 44 1 6.9144 10.8372 2.2249 45 1 7.6963 11.7620 3.5291 46 1 8.2168 10.0948 3.1848 47 1 3.9683 5.3333 -1.5232 48 1 2.8273 6.7299 -1.3026 49 1 4.4582 1.3149 -0.0127 50 1 2.6225 -3.2013 0.1031 51 1 0.3258 -2.2392 -1.3897 52 1 0.2047 -4.2160 1.5045 53 1 1.2400 -2.3628 2.6930 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_5000100.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:02:04 Heat of formation + Delta-G solvation = -67.480801 kcal Electronic energy + Delta-G solvation = -35243.106557 eV Core-core repulsion = 30357.803254 eV Total energy + Delta-G solvation = -4885.303303 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 444.114 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -42.90985 -41.83482 -41.09630 -39.44894 -38.27510 -37.86773 -35.96669 -35.09670 -34.64520 -33.99818 -32.10701 -30.96841 -29.12398 -28.37863 -28.31304 -27.37842 -27.01038 -26.67278 -24.32760 -23.27390 -22.83399 -21.84536 -21.21256 -20.65654 -20.19843 -19.12103 -19.00093 -18.06886 -17.70116 -17.38159 -17.31255 -17.03544 -16.74456 -16.38241 -16.05230 -15.95983 -15.82117 -15.58964 -15.43171 -15.13369 -14.74274 -14.68076 -14.47494 -14.40753 -14.36234 -14.26176 -13.89420 -13.70700 -13.43029 -13.36718 -13.22704 -13.21552 -12.97731 -12.92657 -12.91084 -12.87175 -12.46304 -12.36709 -12.35205 -11.99407 -11.93851 -11.63987 -11.40599 -11.35330 -11.27720 -11.10768 -11.09988 -10.81997 -10.23328 -10.13898 -9.81280 -9.30798 -5.22625 0.13205 0.60951 0.90456 1.16388 1.18490 1.41370 1.52554 1.75829 1.81371 2.15102 2.23958 3.12738 3.18740 3.42361 3.45611 3.52144 3.61287 3.72166 3.73439 3.77406 3.78509 3.86065 3.89763 3.93474 4.24886 4.27561 4.31675 4.40066 4.48491 4.55959 4.60008 4.61639 4.62033 4.67626 4.74930 4.75212 4.81523 4.82845 4.86391 4.86668 4.88788 5.01150 5.08762 5.11090 5.18117 5.23162 5.25877 5.27068 5.36578 5.54032 5.58248 5.61418 5.81482 6.39400 6.40536 6.46605 7.05795 7.34059 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 N -0.395 5.395 3 C -0.043 4.043 4 C 0.596 3.404 5 O -0.567 6.567 6 N -0.687 5.687 7 C 0.120 3.880 8 H 0.092 0.908 9 C -0.144 4.144 10 C -0.112 4.112 11 H 0.115 0.885 12 C 0.148 3.852 13 N -0.699 5.699 14 C 0.640 3.360 15 O -0.596 6.596 16 O -0.371 6.371 17 C 0.127 3.873 18 C -0.180 4.180 19 C -0.138 4.138 20 C -0.180 4.180 21 C -0.123 4.123 22 C -0.106 4.106 23 C -0.181 4.181 24 Br -0.029 7.029 25 C 0.046 3.954 26 C -0.054 4.054 27 O -0.540 6.540 28 Si 0.750 3.250 29 H 0.112 0.888 30 H 0.108 0.892 31 H 0.109 0.891 32 H 0.416 0.584 33 H 0.094 0.906 34 H 0.069 0.931 35 H 0.069 0.931 36 H 0.066 0.934 37 H 0.416 0.584 38 H 0.061 0.939 39 H 0.086 0.914 40 H 0.063 0.937 41 H 0.069 0.931 42 H 0.098 0.902 43 H 0.068 0.932 44 H 0.063 0.937 45 H 0.086 0.914 46 H 0.062 0.938 47 H 0.092 0.908 48 H 0.108 0.892 49 H 0.178 0.822 50 H 0.125 0.875 51 H 0.391 0.609 52 H -0.269 1.269 53 H -0.284 1.284 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.063 0.821 0.707 1.518 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.068 5.068 3 C -0.157 4.157 4 C 0.384 3.616 5 O -0.448 6.448 6 N -0.338 5.338 7 C 0.014 3.986 8 H 0.110 0.890 9 C -0.183 4.183 10 C -0.131 4.131 11 H 0.133 0.867 12 C 0.026 3.974 13 N -0.359 5.359 14 C 0.394 3.606 15 O -0.487 6.487 16 O -0.285 6.285 17 C 0.091 3.909 18 C -0.237 4.237 19 C -0.195 4.195 20 C -0.237 4.237 21 C -0.161 4.161 22 C -0.133 4.133 23 C -0.267 4.267 24 Br 0.055 6.945 25 C -0.075 4.075 26 C -0.164 4.164 27 O -0.346 6.346 28 Si 0.652 3.348 29 H 0.130 0.870 30 H 0.126 0.874 31 H 0.128 0.872 32 H 0.254 0.746 33 H 0.112 0.888 34 H 0.088 0.912 35 H 0.087 0.913 36 H 0.085 0.915 37 H 0.253 0.747 38 H 0.080 0.920 39 H 0.105 0.895 40 H 0.082 0.918 41 H 0.088 0.912 42 H 0.117 0.883 43 H 0.088 0.912 44 H 0.082 0.918 45 H 0.105 0.895 46 H 0.081 0.919 47 H 0.111 0.889 48 H 0.127 0.873 49 H 0.195 0.805 50 H 0.142 0.858 51 H 0.240 0.760 52 H -0.195 1.195 53 H -0.211 1.211 Dipole moment (debyes) X Y Z Total from point charges -1.470 0.326 1.148 1.893 hybrid contribution 0.954 -0.153 0.072 0.969 sum -0.516 0.173 1.220 1.336 Atomic orbital electron populations 1.22785 0.73754 1.05307 1.06705 1.43897 1.07900 1.03554 1.51454 1.20042 0.89962 0.87781 1.17954 1.16855 0.85486 0.83452 0.75846 1.90816 1.17310 1.84998 1.51679 1.45211 1.10067 1.05050 1.73508 1.21850 0.99429 0.79425 0.97859 0.88966 1.23569 0.96780 1.00198 0.97730 1.22902 0.97532 0.94808 0.97820 0.86689 1.21435 0.97209 0.97242 0.81548 1.44755 1.62610 1.07547 1.20969 1.18408 0.77182 0.84624 0.80435 1.90909 1.62114 1.36695 1.59011 1.86308 1.72001 1.37038 1.33198 1.22339 0.94460 0.78177 0.95955 1.22471 0.97776 1.00149 1.03314 1.21890 1.01176 1.04418 0.92009 1.22472 0.98365 1.02571 1.00273 1.23279 0.97590 0.99618 0.95628 1.21504 0.95899 0.92686 1.03163 1.20995 0.91385 0.95056 1.19234 1.96663 1.36101 1.63453 1.98247 1.20843 0.89934 0.90268 1.06460 1.24950 1.03505 0.89992 0.97963 1.86593 1.46965 1.62760 1.38325 0.94403 0.84446 0.82322 0.73625 0.87015 0.87431 0.87237 0.74629 0.88767 0.91214 0.91278 0.91549 0.74732 0.92008 0.89504 0.91764 0.91174 0.88350 0.91248 0.91756 0.89522 0.91914 0.88897 0.87329 0.80482 0.85812 0.75964 1.19498 1.21085 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.37 8.98 127.77 1.15 0.77 16 2 N -0.39 0.42 3.10 -519.61 -1.61 -1.19 16 3 C -0.04 0.00 6.88 40.35 0.28 0.28 16 4 C 0.60 0.17 7.77 86.44 0.67 0.85 16 5 O -0.57 -3.33 14.43 -4.34 -0.06 -3.40 16 6 N -0.69 3.89 5.25 -444.01 -2.33 1.56 16 7 C 0.12 -0.71 4.26 45.52 0.19 -0.51 16 8 H 0.09 -0.19 7.57 -2.39 -0.02 -0.21 16 9 C -0.14 0.95 7.45 31.21 0.23 1.18 16 10 C -0.11 1.05 3.64 -10.17 -0.04 1.01 16 11 H 0.12 -1.38 8.14 -2.39 -0.02 -1.40 16 12 C 0.15 -0.62 5.51 86.38 0.48 -0.14 16 13 N -0.70 0.94 5.56 -590.84 -3.28 -2.35 16 14 C 0.64 3.80 8.06 129.79 1.05 4.85 16 15 O -0.60 -6.84 11.88 19.79 0.24 -6.60 16 16 O -0.37 -1.90 9.94 -55.49 -0.55 -2.46 16 17 C 0.13 0.36 1.13 -10.79 -0.01 0.34 16 18 C -0.18 -0.57 8.37 71.98 0.60 0.03 16 19 C -0.14 0.29 8.85 71.98 0.64 0.93 16 20 C -0.18 -0.54 8.37 71.98 0.60 0.07 16 21 C -0.12 1.20 7.38 31.12 0.23 1.43 16 22 C -0.11 0.10 10.34 22.58 0.23 0.33 16 23 C -0.18 -0.48 6.53 22.04 0.14 -0.34 16 24 Br -0.03 -0.10 33.06 -20.37 -0.67 -0.77 16 25 C 0.05 0.05 5.31 41.35 0.22 0.27 16 26 C -0.05 0.00 2.87 71.24 0.20 0.20 16 27 O -0.54 0.40 12.88 -148.98 -1.92 -1.52 16 28 Si 0.75 -1.66 29.16 68.60 2.00 0.34 16 29 H 0.11 -1.15 8.14 -2.39 -0.02 -1.17 16 30 H 0.11 -1.32 3.73 -2.38 -0.01 -1.33 16 31 H 0.11 -0.49 6.54 -2.39 -0.02 -0.51 16 32 H 0.42 -4.36 7.60 -92.71 -0.70 -5.06 16 33 H 0.09 -0.54 7.91 -2.39 -0.02 -0.56 16 34 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 35 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 36 H 0.07 -0.14 7.85 -2.39 -0.02 -0.15 16 37 H 0.42 -2.34 8.58 -92.71 -0.80 -3.13 16 38 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 39 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 40 H 0.06 0.54 5.88 -2.38 -0.01 0.53 16 41 H 0.07 -0.17 8.14 -2.38 -0.02 -0.19 16 42 H 0.10 -0.53 8.14 -2.39 -0.02 -0.54 16 43 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 44 H 0.06 0.53 5.88 -2.38 -0.01 0.51 16 45 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 46 H 0.06 0.14 8.14 -2.38 -0.02 0.12 16 47 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 48 H 0.11 -1.10 8.10 -2.38 -0.02 -1.12 16 49 H 0.18 -1.21 7.44 -2.91 -0.02 -1.23 16 50 H 0.12 0.28 6.96 -2.39 -0.02 0.26 16 51 H 0.39 -3.59 7.56 -74.06 -0.56 -4.15 16 52 H -0.27 -0.85 7.11 99.48 0.71 -0.14 16 53 H -0.28 -1.27 7.11 99.48 0.71 -0.56 16 Total: 0.00 -24.24 440.50 -2.37 -26.61 By element: Atomic # 1 Polarization: -20.74 SS G_CDS: -1.05 Total: -21.78 kcal Atomic # 6 Polarization: 4.69 SS G_CDS: 6.87 Total: 11.56 kcal Atomic # 7 Polarization: 5.25 SS G_CDS: -7.22 Total: -1.98 kcal Atomic # 8 Polarization: -11.68 SS G_CDS: -2.30 Total: -13.98 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: 2.00 Total: 0.34 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -0.67 Total: -0.77 kcal Total: -24.24 -2.37 -26.61 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_5000100.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.873 kcal (2) G-P(sol) polarization free energy of solvation -24.237 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.110 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.371 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.608 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.481 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds