Wall clock time and date at job start Sat Mar 6 2021 20:02:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53003 * 109.47212 * 2 1 4 4 C 1.52995 * 109.47168 * 239.99695 * 2 1 3 5 5 O 1.45206 * 109.46694 * 119.99915 * 2 1 3 6 6 C 1.34636 * 117.00136 * 59.99990 * 5 2 1 7 7 O 1.21509 * 119.99990 * 0.02562 * 6 5 2 8 8 N 1.34779 * 119.99877 * 180.02562 * 6 5 2 9 9 C 1.46499 * 119.99872 * 180.02562 * 8 6 5 10 10 C 1.53000 * 109.46840 * 180.02562 * 9 8 6 11 11 H 1.08996 * 112.85005 * 316.18669 * 10 9 8 12 12 C 1.53775 * 113.61825 * 87.50296 * 10 9 8 13 13 C 1.53776 * 87.08393 * 139.97637 * 12 10 9 14 14 H 1.08997 * 113.69167 * 220.00522 * 13 12 10 15 15 N 1.46508 * 113.61221 * 89.11491 * 13 12 10 16 16 C 1.34779 * 119.99727 * 107.50020 * 15 13 12 17 17 O 1.21692 * 120.00078 * 0.02562 * 16 15 13 18 18 C 1.46674 * 119.99783 * 179.97438 * 16 15 13 19 19 C 1.37873 * 126.23561 * 180.02562 * 18 16 15 20 20 C 1.39830 * 107.08859 * 180.02562 * 19 18 16 21 21 C 1.35454 * 107.86357 * 359.97438 * 20 19 18 22 22 C 1.50701 * 125.56163 * 179.97438 * 21 20 19 23 23 O 1.42896 * 109.47217 * 245.02738 * 22 21 20 24 24 Si 1.86292 * 109.47315 * 5.02813 * 22 21 20 25 25 N 1.35534 * 108.87011 * 359.73618 * 21 20 19 26 26 C 1.53774 * 87.08069 * 334.56900 * 13 12 10 27 27 H 1.08994 * 109.47245 * 300.00365 * 1 2 3 28 28 H 1.09006 * 109.47200 * 60.00393 * 1 2 3 29 29 H 1.09003 * 109.47113 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47015 * 179.97438 * 3 2 1 31 31 H 1.08997 * 109.46468 * 299.99903 * 3 2 1 32 32 H 1.08995 * 109.46581 * 59.99548 * 3 2 1 33 33 H 1.09003 * 109.47357 * 300.00161 * 4 2 1 34 34 H 1.08993 * 109.47323 * 60.00149 * 4 2 1 35 35 H 1.08999 * 109.46974 * 180.02562 * 4 2 1 36 36 H 0.97000 * 119.99708 * 359.97438 * 8 6 5 37 37 H 1.09002 * 109.47391 * 59.99686 * 9 8 6 38 38 H 1.09001 * 109.46813 * 299.99742 * 9 8 6 39 39 H 1.09005 * 113.61502 * 254.53312 * 12 10 9 40 40 H 1.08999 * 113.61676 * 25.42734 * 12 10 9 41 41 H 0.96998 * 120.00314 * 287.50235 * 15 13 12 42 42 H 1.08005 * 126.45128 * 359.95596 * 19 18 16 43 43 H 1.07997 * 126.06733 * 179.97438 * 20 19 18 44 44 H 1.09003 * 109.47008 * 125.02653 * 22 21 20 45 45 H 0.96704 * 114.00485 * 59.99742 * 23 22 21 46 46 H 1.48505 * 110.00395 * 58.67779 * 24 22 21 47 47 H 1.48498 * 110.00413 * 180.02562 * 24 22 21 48 48 H 0.97000 * 125.67626 * 180.30438 * 25 21 20 49 49 H 1.09006 * 113.61277 * 270.88016 * 26 13 12 50 50 H 1.09001 * 113.69334 * 139.99428 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6521 -1.9723 1.3384 7 8 0.9515 -2.5097 0.5037 8 7 2.0670 -2.6654 2.4174 9 6 1.6738 -4.0668 2.5833 10 6 2.2727 -4.6143 3.8804 11 1 3.3132 -4.3226 4.0224 12 6 1.3895 -4.3743 5.1162 13 6 1.7796 -5.7900 5.5726 14 1 0.9559 -6.3500 6.0151 15 7 2.9968 -5.8294 6.3872 16 6 2.9141 -6.0679 7.7111 17 8 1.8286 -6.2509 8.2298 18 6 4.1326 -6.1079 8.5265 19 6 4.1976 -6.3404 9.8840 20 6 5.5474 -6.2891 10.2455 21 6 6.2675 -6.0326 9.1273 22 6 7.7668 -5.8938 9.0630 23 8 8.1058 -4.5560 8.6922 24 14 8.4983 -6.2797 10.7322 25 7 5.4202 -5.9265 8.0749 26 6 2.0203 -6.1168 4.0894 27 1 -0.3633 0.5139 0.8899 28 1 -0.3634 0.5138 -0.8901 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9562 -0.8900 32 1 1.6766 1.9563 0.8899 33 1 1.6766 -1.7490 -1.2492 34 1 1.6767 -0.2076 -2.1391 35 1 3.1300 -0.7217 -1.2489 36 1 2.6266 -2.2364 3.0835 37 1 2.0410 -4.6497 1.7387 38 1 0.5869 -4.1364 2.6277 39 1 1.7605 -3.5863 5.7717 40 1 0.3304 -4.2674 4.8819 41 1 3.8620 -5.6839 5.9737 42 1 3.3630 -6.5258 10.5439 43 1 5.9451 -6.4293 11.2397 44 1 8.1645 -6.5879 8.3227 45 1 7.7831 -3.8834 9.3075 46 1 8.1263 -7.6573 11.1437 47 1 9.9764 -6.1457 10.6824 48 1 5.6779 -5.7497 7.1566 49 1 1.1336 -6.4864 3.5743 50 1 2.9002 -6.7359 3.9144 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13437852_6580494.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:02:23 Heat of formation + Delta-G solvation = -79.264704 kcal Electronic energy + Delta-G solvation = -30806.603264 eV Core-core repulsion = 26416.144595 eV Total energy + Delta-G solvation = -4390.458669 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.59397 -41.75379 -41.15510 -39.44998 -38.21076 -37.81265 -35.87497 -34.96453 -34.21851 -32.19247 -31.42530 -29.20287 -28.33065 -28.28967 -26.99024 -26.93205 -24.55005 -23.35692 -22.86753 -21.73121 -21.19974 -21.15585 -20.35804 -19.95655 -19.07104 -18.23339 -17.64757 -17.27560 -17.16666 -16.79462 -16.44807 -16.39403 -16.07538 -15.80651 -15.67135 -15.34237 -15.22656 -15.03909 -14.97536 -14.53505 -14.47031 -14.37617 -14.08404 -13.99028 -13.71813 -13.65863 -13.42187 -13.30146 -13.01133 -12.85294 -12.82721 -12.37781 -12.30583 -12.28000 -12.24495 -12.11522 -11.84349 -11.51211 -11.29227 -11.24744 -10.96792 -10.79291 -10.30258 -10.18898 -10.12605 -9.31950 -5.09914 0.30161 1.06879 1.19354 1.48967 1.59932 1.79222 1.88524 1.90256 2.09055 2.31152 3.04307 3.20427 3.23648 3.39910 3.48175 3.51142 3.59416 3.72855 3.77745 3.82963 3.96970 3.97815 4.14623 4.21653 4.31820 4.35083 4.42831 4.53639 4.53798 4.56291 4.62760 4.64466 4.71688 4.77845 4.81493 4.83524 4.87767 4.92621 4.92942 4.96124 5.03995 5.07634 5.19729 5.36248 5.36957 5.45179 5.54867 5.59952 5.77459 6.13528 6.32175 6.34016 6.40046 7.04699 7.42310 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.366 6.366 6 C 0.649 3.351 7 O -0.566 6.566 8 N -0.712 5.712 9 C 0.147 3.853 10 C -0.127 4.127 11 H 0.097 0.903 12 C -0.146 4.146 13 C 0.121 3.879 14 H 0.110 0.890 15 N -0.716 5.716 16 C 0.593 3.407 17 O -0.520 6.520 18 C -0.053 4.053 19 C -0.096 4.096 20 C -0.199 4.199 21 C 0.023 3.977 22 C -0.056 4.056 23 O -0.543 6.543 24 Si 0.721 3.279 25 N -0.524 5.524 26 C -0.134 4.134 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.059 0.941 36 H 0.406 0.594 37 H 0.073 0.927 38 H 0.075 0.925 39 H 0.075 0.925 40 H 0.098 0.902 41 H 0.394 0.606 42 H 0.154 0.846 43 H 0.152 0.848 44 H 0.114 0.886 45 H 0.384 0.616 46 H -0.253 1.253 47 H -0.253 1.253 48 H 0.416 0.584 49 H 0.104 0.896 50 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.554 2.111 1.030 4.260 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.402 3.598 7 O -0.455 6.455 8 N -0.371 5.371 9 C 0.025 3.975 10 C -0.146 4.146 11 H 0.115 0.885 12 C -0.184 4.184 13 C 0.016 3.984 14 H 0.128 0.872 15 N -0.367 5.367 16 C 0.381 3.619 17 O -0.395 6.395 18 C -0.166 4.166 19 C -0.122 4.122 20 C -0.224 4.224 21 C -0.096 4.096 22 C -0.166 4.166 23 O -0.349 6.349 24 Si 0.620 3.380 25 N -0.120 5.120 26 C -0.172 4.172 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.105 0.895 34 H 0.091 0.909 35 H 0.078 0.922 36 H 0.240 0.760 37 H 0.091 0.909 38 H 0.094 0.906 39 H 0.094 0.906 40 H 0.116 0.884 41 H 0.228 0.772 42 H 0.171 0.829 43 H 0.170 0.830 44 H 0.132 0.868 45 H 0.232 0.768 46 H -0.177 1.177 47 H -0.178 1.178 48 H 0.253 0.747 49 H 0.122 0.878 50 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 3.203 0.967 0.711 3.420 hybrid contribution 0.586 0.240 -1.149 1.312 sum 3.789 1.207 -0.439 4.001 Atomic orbital electron populations 1.22522 0.93831 1.05045 1.02726 1.22117 0.94464 0.91554 0.81852 1.21879 1.02307 0.92365 1.03354 1.22520 1.01569 1.03451 0.96573 1.86303 1.71514 1.23479 1.46746 1.18115 0.78857 0.80646 0.82184 1.90923 1.40939 1.70488 1.43197 1.44708 1.55942 1.12706 1.23759 1.21372 1.00199 0.78778 0.97155 1.22908 1.00349 0.96991 0.94319 0.88522 1.23555 1.00823 0.97601 0.96467 1.21837 0.88145 0.97760 0.90698 0.87154 1.45558 1.09498 1.73777 1.07862 1.17042 0.87457 0.76234 0.81133 1.90882 1.27557 1.49218 1.71873 1.20430 0.83328 1.17640 0.95229 1.21348 0.97217 1.01258 0.92411 1.20720 0.93242 1.10529 0.97861 1.21167 0.92986 1.07576 0.87827 1.24958 0.90127 0.87910 1.13580 1.86502 1.79489 1.14679 1.54211 0.94002 0.79810 0.85263 0.78883 1.41943 1.05486 1.54597 1.10004 1.23315 1.03783 0.95092 0.95045 0.92106 0.90920 0.89444 0.91418 0.89913 0.91391 0.89450 0.90913 0.92154 0.75968 0.90850 0.90641 0.90644 0.88381 0.77189 0.82880 0.83045 0.86837 0.76817 1.17675 1.17806 0.74701 0.87756 0.90297 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.27 8.37 37.16 0.31 0.04 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.09 8.85 37.16 0.33 0.42 16 4 C -0.18 -0.26 8.37 37.16 0.31 0.06 16 5 O -0.37 -0.90 9.94 -40.31 -0.40 -1.30 16 6 C 0.65 1.79 8.06 54.06 0.44 2.23 16 7 O -0.57 -2.94 11.88 -19.28 -0.23 -3.17 16 8 N -0.71 0.34 5.56 -65.28 -0.36 -0.02 16 9 C 0.15 -0.25 5.51 -4.04 -0.02 -0.28 16 10 C -0.13 0.48 3.63 -89.81 -0.33 0.15 16 11 H 0.10 -0.45 8.14 -51.93 -0.42 -0.88 16 12 C -0.15 0.37 7.43 -25.92 -0.19 0.18 16 13 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 14 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 15 N -0.72 1.21 5.26 -54.33 -0.29 0.92 16 16 C 0.59 1.01 7.79 -12.85 -0.10 0.91 16 17 O -0.52 -2.92 16.48 5.20 0.09 -2.84 16 18 C -0.05 -0.04 7.06 -81.98 -0.58 -0.62 16 19 C -0.10 -0.10 10.65 -39.12 -0.42 -0.51 16 20 C -0.20 0.15 9.32 -39.98 -0.37 -0.23 16 21 C 0.02 -0.03 6.47 -81.95 -0.53 -0.56 16 22 C -0.06 0.12 3.08 36.01 0.11 0.24 16 23 O -0.54 1.05 12.88 -35.23 -0.45 0.60 16 24 Si 0.72 -1.93 30.56 -169.99 -5.19 -7.12 16 25 N -0.52 0.85 5.99 -5.70 -0.03 0.81 16 26 C -0.13 0.49 7.39 -25.92 -0.19 0.30 16 27 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 28 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 29 H 0.09 0.31 5.88 -51.93 -0.31 0.01 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 36 H 0.41 -0.96 8.58 -40.82 -0.35 -1.31 16 37 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 38 H 0.08 -0.07 7.84 -51.93 -0.41 -0.48 16 39 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.10 -0.23 7.89 -51.93 -0.41 -0.64 16 41 H 0.39 -1.68 7.83 -40.82 -0.32 -2.00 16 42 H 0.15 0.12 8.06 -52.48 -0.42 -0.30 16 43 H 0.15 -0.43 6.19 -52.49 -0.32 -0.75 16 44 H 0.11 -0.24 7.96 -51.93 -0.41 -0.66 16 45 H 0.38 -2.07 8.70 45.56 0.40 -1.67 16 46 H -0.25 0.01 7.11 56.52 0.40 0.41 16 47 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 48 H 0.42 -1.64 8.19 -40.82 -0.33 -1.98 16 49 H 0.10 -0.41 8.10 -51.93 -0.42 -0.83 16 50 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 LS Contribution 408.32 15.07 6.15 6.15 Total: 0.00 -9.90 408.32 -10.20 -20.10 By element: Atomic # 1 Polarization: -8.19 SS G_CDS: -7.85 Total: -16.04 kcal Atomic # 6 Polarization: 3.54 SS G_CDS: -1.63 Total: 1.91 kcal Atomic # 7 Polarization: 2.40 SS G_CDS: -0.68 Total: 1.71 kcal Atomic # 8 Polarization: -5.71 SS G_CDS: -1.00 Total: -6.71 kcal Atomic # 14 Polarization: -1.93 SS G_CDS: -5.19 Total: -7.12 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -9.90 -10.20 -20.10 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_6580494.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.168 kcal (2) G-P(sol) polarization free energy of solvation -9.897 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.065 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.200 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.097 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.265 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds