Wall clock time and date at job start Sat Mar 6 2021 20:02:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53003 * 109.47212 * 2 1 4 4 C 1.52995 * 109.47168 * 239.99695 * 2 1 3 5 5 O 1.45206 * 109.46694 * 119.99915 * 2 1 3 6 6 C 1.34636 * 117.00136 * 59.99990 * 5 2 1 7 7 O 1.21509 * 119.99990 * 0.02562 * 6 5 2 8 8 N 1.34779 * 119.99877 * 180.02562 * 6 5 2 9 9 C 1.46499 * 119.99872 * 180.02562 * 8 6 5 10 10 C 1.53000 * 109.46840 * 180.02562 * 9 8 6 11 11 H 1.08996 * 112.85005 * 316.18669 * 10 9 8 12 12 C 1.53775 * 113.61825 * 87.50296 * 10 9 8 13 13 C 1.53776 * 87.08393 * 139.97637 * 12 10 9 14 14 H 1.08997 * 113.69167 * 220.00522 * 13 12 10 15 15 N 1.46508 * 113.61221 * 89.11491 * 13 12 10 16 16 C 1.34779 * 119.99727 * 107.50020 * 15 13 12 17 17 O 1.21692 * 120.00078 * 0.02562 * 16 15 13 18 18 C 1.46674 * 119.99783 * 179.97438 * 16 15 13 19 19 C 1.37873 * 126.23561 * 180.02562 * 18 16 15 20 20 C 1.39830 * 107.08859 * 180.02562 * 19 18 16 21 21 C 1.35454 * 107.86357 * 359.97438 * 20 19 18 22 22 C 1.50701 * 125.56163 * 179.97438 * 21 20 19 23 23 O 1.42896 * 109.47217 * 245.02738 * 22 21 20 24 24 Si 1.86292 * 109.47315 * 5.02813 * 22 21 20 25 25 N 1.35534 * 108.87011 * 359.73618 * 21 20 19 26 26 C 1.53774 * 87.08069 * 334.56900 * 13 12 10 27 27 H 1.08994 * 109.47245 * 300.00365 * 1 2 3 28 28 H 1.09006 * 109.47200 * 60.00393 * 1 2 3 29 29 H 1.09003 * 109.47113 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47015 * 179.97438 * 3 2 1 31 31 H 1.08997 * 109.46468 * 299.99903 * 3 2 1 32 32 H 1.08995 * 109.46581 * 59.99548 * 3 2 1 33 33 H 1.09003 * 109.47357 * 300.00161 * 4 2 1 34 34 H 1.08993 * 109.47323 * 60.00149 * 4 2 1 35 35 H 1.08999 * 109.46974 * 180.02562 * 4 2 1 36 36 H 0.97000 * 119.99708 * 359.97438 * 8 6 5 37 37 H 1.09002 * 109.47391 * 59.99686 * 9 8 6 38 38 H 1.09001 * 109.46813 * 299.99742 * 9 8 6 39 39 H 1.09005 * 113.61502 * 254.53312 * 12 10 9 40 40 H 1.08999 * 113.61676 * 25.42734 * 12 10 9 41 41 H 0.96998 * 120.00314 * 287.50235 * 15 13 12 42 42 H 1.08005 * 126.45128 * 359.95596 * 19 18 16 43 43 H 1.07997 * 126.06733 * 179.97438 * 20 19 18 44 44 H 1.09003 * 109.47008 * 125.02653 * 22 21 20 45 45 H 0.96704 * 114.00485 * 59.99742 * 23 22 21 46 46 H 1.48505 * 110.00395 * 58.67779 * 24 22 21 47 47 H 1.48498 * 110.00413 * 180.02562 * 24 22 21 48 48 H 0.97000 * 125.67626 * 180.30438 * 25 21 20 49 49 H 1.09006 * 113.61277 * 270.88016 * 26 13 12 50 50 H 1.09001 * 113.69334 * 139.99428 * 26 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0139 -0.6845 1.1856 6 6 1.6521 -1.9723 1.3384 7 8 0.9515 -2.5097 0.5037 8 7 2.0670 -2.6654 2.4174 9 6 1.6738 -4.0668 2.5833 10 6 2.2727 -4.6143 3.8804 11 1 3.3132 -4.3226 4.0224 12 6 1.3895 -4.3743 5.1162 13 6 1.7796 -5.7900 5.5726 14 1 0.9559 -6.3500 6.0151 15 7 2.9968 -5.8294 6.3872 16 6 2.9141 -6.0679 7.7111 17 8 1.8286 -6.2509 8.2298 18 6 4.1326 -6.1079 8.5265 19 6 4.1976 -6.3404 9.8840 20 6 5.5474 -6.2891 10.2455 21 6 6.2675 -6.0326 9.1273 22 6 7.7668 -5.8938 9.0630 23 8 8.1058 -4.5560 8.6922 24 14 8.4983 -6.2797 10.7322 25 7 5.4202 -5.9265 8.0749 26 6 2.0203 -6.1168 4.0894 27 1 -0.3633 0.5139 0.8899 28 1 -0.3634 0.5138 -0.8901 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9562 -0.8900 32 1 1.6766 1.9563 0.8899 33 1 1.6766 -1.7490 -1.2492 34 1 1.6767 -0.2076 -2.1391 35 1 3.1300 -0.7217 -1.2489 36 1 2.6266 -2.2364 3.0835 37 1 2.0410 -4.6497 1.7387 38 1 0.5869 -4.1364 2.6277 39 1 1.7605 -3.5863 5.7717 40 1 0.3304 -4.2674 4.8819 41 1 3.8620 -5.6839 5.9737 42 1 3.3630 -6.5258 10.5439 43 1 5.9451 -6.4293 11.2397 44 1 8.1645 -6.5879 8.3227 45 1 7.7831 -3.8834 9.3075 46 1 8.1263 -7.6573 11.1437 47 1 9.9764 -6.1457 10.6824 48 1 5.6779 -5.7497 7.1566 49 1 1.1336 -6.4864 3.5743 50 1 2.9002 -6.7359 3.9144 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_6580494.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:02:22 Heat of formation + Delta-G solvation = -82.598006 kcal Electronic energy + Delta-G solvation = -30806.747807 eV Core-core repulsion = 26416.144595 eV Total energy + Delta-G solvation = -4390.603212 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.188 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.55338 -41.86451 -41.10650 -39.50039 -38.30835 -37.65391 -35.99546 -35.03938 -34.24750 -32.13856 -31.36435 -29.14806 -28.39695 -28.32788 -26.89928 -26.74967 -24.50326 -23.35771 -22.87355 -21.65691 -21.26031 -21.15576 -20.29945 -19.88298 -19.15323 -18.12680 -17.71688 -17.35150 -17.17091 -16.71092 -16.43919 -16.34246 -16.04483 -15.77177 -15.71230 -15.37993 -15.15228 -15.04174 -14.94279 -14.53208 -14.43992 -14.37982 -14.01988 -13.93330 -13.64647 -13.50280 -13.38326 -13.25947 -13.00099 -12.94385 -12.89182 -12.49056 -12.37624 -12.21185 -12.10582 -12.04561 -11.71181 -11.43046 -11.37685 -11.35847 -11.13806 -10.65299 -10.30810 -10.21104 -10.07158 -9.28443 -4.90593 0.28259 1.14761 1.23670 1.54012 1.72585 1.73022 1.88464 1.97264 2.21526 2.24873 3.08374 3.38081 3.48552 3.53454 3.60389 3.68222 3.71675 3.74439 3.76801 3.82174 3.91750 4.19252 4.25676 4.30893 4.43416 4.45809 4.50959 4.57421 4.58458 4.68346 4.73596 4.73990 4.78273 4.79293 4.83081 4.84921 4.94612 4.96902 5.00844 5.06151 5.10726 5.12513 5.22383 5.24146 5.33048 5.48690 5.56748 5.59812 5.79244 6.26489 6.35641 6.44156 6.69042 7.01662 7.30658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.641 3.359 7 O -0.596 6.596 8 N -0.699 5.699 9 C 0.148 3.852 10 C -0.109 4.109 11 H 0.116 0.884 12 C -0.144 4.144 13 C 0.112 3.888 14 H 0.088 0.912 15 N -0.699 5.699 16 C 0.591 3.409 17 O -0.570 6.570 18 C -0.065 4.065 19 C -0.117 4.117 20 C -0.205 4.205 21 C 0.029 3.971 22 C -0.053 4.053 23 O -0.554 6.554 24 Si 0.801 3.199 25 N -0.512 5.512 26 C -0.123 4.123 27 H 0.061 0.939 28 H 0.087 0.913 29 H 0.063 0.937 30 H 0.070 0.930 31 H 0.098 0.902 32 H 0.069 0.931 33 H 0.063 0.937 34 H 0.086 0.914 35 H 0.062 0.938 36 H 0.416 0.584 37 H 0.070 0.930 38 H 0.066 0.934 39 H 0.070 0.930 40 H 0.094 0.906 41 H 0.410 0.590 42 H 0.145 0.855 43 H 0.170 0.830 44 H 0.117 0.883 45 H 0.399 0.601 46 H -0.287 1.287 47 H -0.296 1.296 48 H 0.427 0.573 49 H 0.108 0.892 50 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.002 3.014 0.496 5.861 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.394 3.606 7 O -0.487 6.487 8 N -0.359 5.359 9 C 0.026 3.974 10 C -0.127 4.127 11 H 0.134 0.866 12 C -0.182 4.182 13 C 0.007 3.993 14 H 0.106 0.894 15 N -0.349 5.349 16 C 0.380 3.620 17 O -0.449 6.449 18 C -0.179 4.179 19 C -0.144 4.144 20 C -0.229 4.229 21 C -0.090 4.090 22 C -0.163 4.163 23 O -0.362 6.362 24 Si 0.706 3.294 25 N -0.109 5.109 26 C -0.161 4.161 27 H 0.080 0.920 28 H 0.105 0.895 29 H 0.082 0.918 30 H 0.089 0.911 31 H 0.117 0.883 32 H 0.088 0.912 33 H 0.082 0.918 34 H 0.105 0.895 35 H 0.081 0.919 36 H 0.253 0.747 37 H 0.088 0.912 38 H 0.084 0.916 39 H 0.089 0.911 40 H 0.113 0.887 41 H 0.246 0.754 42 H 0.163 0.837 43 H 0.187 0.813 44 H 0.134 0.866 45 H 0.250 0.750 46 H -0.214 1.214 47 H -0.224 1.224 48 H 0.267 0.733 49 H 0.126 0.874 50 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 4.677 1.909 0.148 5.054 hybrid contribution 0.173 -0.053 -0.980 0.996 sum 4.850 1.855 -0.831 5.258 Atomic orbital electron populations 1.22476 0.94114 1.03661 1.03501 1.22350 0.94418 0.92608 0.81548 1.21892 1.02476 0.90874 1.04237 1.22469 1.01651 1.02231 0.97336 1.86308 1.71555 1.23365 1.47269 1.18396 0.78818 0.80798 0.82598 1.90910 1.42326 1.71033 1.44427 1.44736 1.55275 1.12927 1.22968 1.21418 0.99850 0.78137 0.97998 1.22819 1.00810 0.96690 0.92419 0.86647 1.23523 1.00997 0.96805 0.96913 1.21882 0.87632 0.98262 0.91560 0.89412 1.45408 1.10382 1.72298 1.06855 1.17226 0.87092 0.75698 0.81976 1.90853 1.29263 1.51789 1.72949 1.20280 0.83794 1.18615 0.95176 1.21502 0.97996 1.02064 0.92846 1.20958 0.92506 1.10363 0.99025 1.21348 0.93396 1.06584 0.87652 1.25001 0.89216 0.88194 1.13870 1.86477 1.79620 1.14968 1.55115 0.92987 0.76292 0.82720 0.77409 1.41883 1.04541 1.53817 1.10679 1.23279 1.04544 0.95248 0.93056 0.91994 0.89461 0.91825 0.91127 0.88319 0.91225 0.91805 0.89482 0.91884 0.74719 0.91182 0.91564 0.91118 0.88718 0.75390 0.83678 0.81296 0.86605 0.75020 1.21390 1.22352 0.73282 0.87380 0.89047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.60 8.37 71.98 0.60 0.00 16 2 C 0.13 0.36 1.13 -10.79 -0.01 0.35 16 3 C -0.14 0.30 8.85 71.98 0.64 0.94 16 4 C -0.18 -0.54 8.37 71.98 0.60 0.06 16 5 O -0.37 -1.92 9.94 -55.45 -0.55 -2.47 16 6 C 0.64 3.95 8.06 129.79 1.05 4.99 16 7 O -0.60 -7.02 11.88 19.81 0.24 -6.78 16 8 N -0.70 0.72 5.56 -590.85 -3.29 -2.56 16 9 C 0.15 -0.52 5.51 86.38 0.48 -0.05 16 10 C -0.11 0.91 3.63 -10.27 -0.04 0.88 16 11 H 0.12 -1.34 8.14 -2.39 -0.02 -1.36 16 12 C -0.14 0.70 7.43 31.12 0.23 0.93 16 13 C 0.11 -0.35 4.32 45.51 0.20 -0.15 16 14 H 0.09 0.18 7.46 -2.39 -0.02 0.16 16 15 N -0.70 2.35 5.26 -444.01 -2.33 0.02 16 16 C 0.59 2.62 7.79 86.45 0.67 3.30 16 17 O -0.57 -7.68 16.48 -4.32 -0.07 -7.75 16 18 C -0.06 -0.12 7.06 40.35 0.28 0.17 16 19 C -0.12 -0.34 10.65 22.57 0.24 -0.10 16 20 C -0.20 0.37 9.32 22.01 0.21 0.57 16 21 C 0.03 -0.10 6.47 41.34 0.27 0.16 16 22 C -0.05 0.30 3.08 71.24 0.22 0.52 16 23 O -0.55 3.08 12.88 -148.98 -1.92 1.16 16 24 Si 0.80 -4.69 30.56 68.60 2.10 -2.59 16 25 N -0.51 2.07 5.99 -171.93 -1.03 1.04 16 26 C -0.12 0.99 7.39 31.12 0.23 1.22 16 27 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 28 H 0.09 -0.01 8.14 -2.38 -0.02 -0.03 16 29 H 0.06 0.55 5.88 -2.39 -0.01 0.54 16 30 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 31 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 32 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 33 H 0.06 0.53 5.88 -2.39 -0.01 0.52 16 34 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 35 H 0.06 0.13 8.14 -2.39 -0.02 0.12 16 36 H 0.42 -2.28 8.58 -92.71 -0.80 -3.07 16 37 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 38 H 0.07 -0.08 7.84 -2.39 -0.02 -0.10 16 39 H 0.07 -0.24 8.14 -2.38 -0.02 -0.26 16 40 H 0.09 -0.37 7.89 -2.39 -0.02 -0.39 16 41 H 0.41 -3.96 7.83 -92.71 -0.73 -4.69 16 42 H 0.15 0.54 8.06 -2.91 -0.02 0.51 16 43 H 0.17 -1.07 6.19 -2.91 -0.02 -1.09 16 44 H 0.12 -0.67 7.96 -2.39 -0.02 -0.69 16 45 H 0.40 -5.04 8.70 -74.05 -0.64 -5.68 16 46 H -0.29 -0.02 7.11 99.48 0.71 0.69 16 47 H -0.30 -0.42 7.11 99.48 0.71 0.29 16 48 H 0.43 -4.02 8.19 -92.71 -0.76 -4.78 16 49 H 0.11 -0.89 8.10 -2.38 -0.02 -0.91 16 50 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 Total: 0.00 -25.43 408.32 -2.89 -28.32 By element: Atomic # 1 Polarization: -20.27 SS G_CDS: -1.89 Total: -22.16 kcal Atomic # 6 Polarization: 7.93 SS G_CDS: 5.86 Total: 13.79 kcal Atomic # 7 Polarization: 5.14 SS G_CDS: -6.65 Total: -1.51 kcal Atomic # 8 Polarization: -13.54 SS G_CDS: -2.31 Total: -15.85 kcal Atomic # 14 Polarization: -4.69 SS G_CDS: 2.10 Total: -2.59 kcal Total: -25.43 -2.89 -28.32 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_6580494.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.280 kcal (2) G-P(sol) polarization free energy of solvation -25.433 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.713 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.885 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.318 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.598 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds