Wall clock time and date at job start Sat Mar 6 2021 20:02:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.33817 * 122.44850 * 2 1 4 4 C 1.50694 * 124.52556 * 0.02975 * 3 2 1 5 5 O 1.42901 * 109.47224 * 46.51240 * 4 3 2 6 6 Si 1.86303 * 109.47600 * 166.51469 * 4 3 2 7 7 S 1.70617 * 110.95362 * 180.02562 * 3 2 1 8 8 C 1.75826 * 91.56351 * 0.02562 * 7 3 2 9 9 C 1.46580 * 125.45910 * 179.97438 * 8 7 3 10 10 O 1.21708 * 120.00212 * 179.97438 * 9 8 7 11 11 N 1.34783 * 120.00033 * 359.97438 * 9 8 7 12 12 C 1.46502 * 120.00210 * 179.97438 * 11 9 8 13 13 H 1.09007 * 112.84534 * 334.66849 * 12 11 9 14 14 C 1.53781 * 113.61349 * 105.86030 * 12 11 9 15 15 C 1.54046 * 86.98424 * 89.16527 * 14 12 11 16 16 H 1.09003 * 113.68559 * 270.87421 * 15 14 12 17 17 C 1.52996 * 113.62420 * 139.97907 * 15 14 12 18 18 N 1.46497 * 109.47210 * 87.49822 * 17 15 14 19 19 C 1.34779 * 120.00154 * 179.97438 * 18 17 15 20 20 O 1.21514 * 119.99909 * 0.02562 * 19 18 17 21 21 O 1.34636 * 120.00153 * 180.02562 * 19 18 17 22 22 C 1.45200 * 116.99936 * 180.02562 * 21 19 18 23 23 C 1.52992 * 109.47305 * 59.99914 * 22 21 19 24 24 C 1.53001 * 109.47186 * 180.02562 * 22 21 19 25 25 C 1.53001 * 109.46889 * 299.99958 * 22 21 19 26 26 C 1.53778 * 87.07999 * 25.43024 * 15 14 12 27 27 C 1.36649 * 109.08617 * 359.73892 * 8 7 3 28 28 H 1.09001 * 109.47439 * 86.18922 * 1 2 3 29 29 H 1.08997 * 109.47159 * 206.19171 * 1 2 3 30 30 H 1.09001 * 109.47045 * 326.19009 * 1 2 3 31 31 H 1.09001 * 109.46928 * 286.51488 * 4 3 2 32 32 H 0.96697 * 113.99643 * 59.99983 * 5 4 3 33 33 H 1.48496 * 110.00289 * 179.97438 * 6 4 3 34 34 H 1.48493 * 109.99647 * 301.31901 * 6 4 3 35 35 H 0.96997 * 119.99811 * 359.97438 * 11 9 8 36 36 H 1.09000 * 113.61310 * 203.66742 * 14 12 11 37 37 H 1.08998 * 113.61657 * 334.57084 * 14 12 11 38 38 H 1.08998 * 109.47290 * 207.50602 * 17 15 14 39 39 H 1.09000 * 109.46756 * 327.50244 * 17 15 14 40 40 H 0.97003 * 120.00240 * 0.02562 * 18 17 15 41 41 H 1.09001 * 109.47126 * 60.00459 * 23 22 21 42 42 H 1.09005 * 109.47427 * 179.97438 * 23 22 21 43 43 H 1.08998 * 109.47282 * 300.00014 * 23 22 21 44 44 H 1.08997 * 109.47358 * 59.98999 * 24 22 21 45 45 H 1.08992 * 109.47339 * 179.97438 * 24 22 21 46 46 H 1.09007 * 109.46864 * 299.99837 * 24 22 21 47 47 H 1.08998 * 109.47183 * 60.00302 * 25 22 21 48 48 H 1.09002 * 109.47234 * 180.02562 * 25 22 21 49 49 H 1.09005 * 109.46996 * 299.99845 * 25 22 21 50 50 H 1.08999 * 113.61759 * 220.02500 * 26 15 14 51 51 H 1.08998 * 113.69289 * 89.12844 * 26 15 14 52 52 H 1.07996 * 123.35425 * 180.24469 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5161 0.0006 5 8 0.5963 2.5916 0.9786 6 14 2.9647 3.7558 0.4100 7 16 3.8969 0.7892 -0.0007 8 6 3.5937 -0.9427 -0.0018 9 6 4.6231 -1.9862 -0.0033 10 8 4.3001 -3.1596 -0.0035 11 7 5.9273 -1.6462 -0.0046 12 6 6.9562 -2.6892 -0.0055 13 1 6.6074 -3.6281 0.4246 14 6 7.6617 -2.8572 -1.3616 15 6 8.6655 -1.7929 -0.8794 16 1 8.3686 -0.7714 -1.1171 17 6 10.1141 -2.0961 -1.2672 18 7 10.3882 -1.5483 -2.5980 19 6 11.6094 -1.6955 -3.1490 20 8 12.4829 -2.2829 -2.5421 21 8 11.8614 -1.1916 -4.3718 22 6 13.1984 -1.3881 -4.9030 23 6 13.4906 -2.8862 -5.0075 24 6 13.2945 -0.7512 -6.2908 25 6 14.2191 -0.7332 -3.9701 26 6 8.3094 -2.2201 0.5544 27 6 2.2446 -1.1601 0.0043 28 1 -0.3634 0.0683 -1.0254 29 1 -0.3633 -0.9221 0.4536 30 1 -0.3633 0.8539 0.5718 31 1 1.2241 2.7365 -0.9844 32 1 0.8911 2.4064 1.8807 33 1 2.3962 5.1276 0.4132 34 1 3.5556 3.4472 1.7369 35 1 6.1847 -0.7110 -0.0048 36 1 8.1050 -3.8428 -1.5039 37 1 7.0578 -2.5370 -2.2106 38 1 10.7876 -1.6408 -0.5411 39 1 10.2687 -3.1750 -1.2796 40 1 9.6910 -1.0790 -3.0824 41 1 12.7635 -3.3527 -5.6721 42 1 14.4942 -3.0337 -5.4066 43 1 13.4223 -3.3395 -4.0186 44 1 13.0864 0.3161 -6.2160 45 1 14.2982 -0.8982 -6.6894 46 1 12.5672 -1.2174 -6.9556 47 1 14.1508 -1.1866 -2.9812 48 1 15.2227 -0.8803 -4.3690 49 1 14.0109 0.3342 -3.8957 50 1 8.2281 -1.3858 1.2511 51 1 8.9289 -3.0316 0.9362 52 1 1.8019 -2.1451 0.0089 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13437852_6739946.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:02:30 Heat of formation + Delta-G solvation = -93.543377 kcal Electronic energy + Delta-G solvation = -32522.931700 eV Core-core repulsion = 28002.668259 eV Total energy + Delta-G solvation = -4520.263441 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.165 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -41.83961 -41.38663 -40.18098 -39.42590 -38.27266 -37.46891 -35.93788 -34.99095 -34.18759 -32.15764 -30.15435 -29.15522 -28.36397 -28.29372 -26.72774 -26.60840 -24.72803 -23.91181 -22.83573 -22.03689 -21.23860 -20.45387 -20.06598 -19.46689 -19.09432 -17.76680 -17.70568 -17.31526 -17.29858 -17.00634 -16.58019 -16.41429 -16.17635 -16.00029 -15.73388 -15.64328 -15.38968 -15.04565 -14.89655 -14.59727 -14.49357 -14.45286 -13.96257 -13.85220 -13.52687 -13.47321 -13.34872 -13.22530 -13.15303 -12.99674 -12.90816 -12.88914 -12.85375 -12.45101 -12.40114 -12.35268 -12.33626 -12.00027 -11.76437 -11.67227 -11.39009 -11.30514 -11.29193 -11.09479 -10.76434 -10.27992 -10.16298 -9.77287 -9.37719 -5.10965 -0.67999 0.28437 0.67684 1.09934 1.19672 1.28393 1.54493 1.77632 1.88596 1.93662 2.03991 3.13571 3.25271 3.42749 3.55775 3.59276 3.68360 3.75086 3.76531 3.80202 3.84143 3.95199 4.10797 4.26298 4.31696 4.48324 4.49367 4.55364 4.57374 4.61451 4.62258 4.70961 4.76957 4.78587 4.79234 4.82558 4.83476 4.86981 4.88212 4.89263 4.99670 5.00924 5.06520 5.11316 5.15526 5.26575 5.27491 5.37354 5.38657 5.44171 5.54573 5.61584 6.32586 6.36916 6.41534 7.01040 7.35964 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 C -0.102 4.102 3 C -0.238 4.238 4 C -0.038 4.038 5 O -0.531 6.531 6 Si 0.727 3.273 7 S 0.263 5.737 8 C -0.284 4.284 9 C 0.592 3.408 10 O -0.571 6.571 11 N -0.695 5.695 12 C 0.110 3.890 13 H 0.087 0.913 14 C -0.145 4.145 15 C -0.109 4.109 16 H 0.119 0.881 17 C 0.148 3.852 18 N -0.698 5.698 19 C 0.641 3.359 20 O -0.597 6.597 21 O -0.370 6.370 22 C 0.127 3.873 23 C -0.180 4.180 24 C -0.138 4.138 25 C -0.180 4.180 26 C -0.122 4.122 27 C -0.061 4.061 28 H 0.071 0.929 29 H 0.064 0.936 30 H 0.091 0.909 31 H 0.138 0.862 32 H 0.389 0.611 33 H -0.273 1.273 34 H -0.261 1.261 35 H 0.412 0.588 36 H 0.094 0.906 37 H 0.071 0.929 38 H 0.071 0.929 39 H 0.065 0.935 40 H 0.417 0.583 41 H 0.061 0.939 42 H 0.086 0.914 43 H 0.063 0.937 44 H 0.070 0.930 45 H 0.097 0.903 46 H 0.068 0.932 47 H 0.063 0.937 48 H 0.085 0.915 49 H 0.063 0.937 50 H 0.094 0.906 51 H 0.109 0.891 52 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.661 6.082 -1.765 6.547 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.115 4.115 3 C -0.358 4.358 4 C -0.149 4.149 5 O -0.339 6.339 6 Si 0.628 3.372 7 S 0.532 5.468 8 C -0.404 4.404 9 C 0.380 3.620 10 O -0.452 6.452 11 N -0.346 5.346 12 C 0.005 3.995 13 H 0.105 0.895 14 C -0.184 4.184 15 C -0.128 4.128 16 H 0.137 0.863 17 C 0.026 3.974 18 N -0.358 5.358 19 C 0.394 3.606 20 O -0.488 6.488 21 O -0.284 6.284 22 C 0.091 3.909 23 C -0.238 4.238 24 C -0.195 4.195 25 C -0.237 4.237 26 C -0.161 4.161 27 C -0.095 4.095 28 H 0.089 0.911 29 H 0.083 0.917 30 H 0.110 0.890 31 H 0.156 0.844 32 H 0.239 0.761 33 H -0.199 1.199 34 H -0.186 1.186 35 H 0.249 0.751 36 H 0.112 0.888 37 H 0.090 0.910 38 H 0.089 0.911 39 H 0.083 0.917 40 H 0.254 0.746 41 H 0.080 0.920 42 H 0.105 0.895 43 H 0.082 0.918 44 H 0.089 0.911 45 H 0.116 0.884 46 H 0.087 0.913 47 H 0.082 0.918 48 H 0.104 0.896 49 H 0.082 0.918 50 H 0.113 0.887 51 H 0.127 0.873 52 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 3.208 6.650 -1.481 7.530 hybrid contribution -2.250 -1.123 0.758 2.626 sum 0.958 5.527 -0.723 5.656 Atomic orbital electron populations 1.20742 0.88642 1.03956 1.03145 1.18740 0.98691 0.90633 1.03387 1.24577 0.99227 1.00893 1.11086 1.24660 0.98130 0.94961 0.97172 1.86567 1.34949 1.91820 1.20610 0.94644 0.79883 0.77213 0.85501 1.82329 1.01897 0.95539 1.66999 1.24637 0.97573 0.98702 1.19489 1.17173 0.82513 0.87019 0.75329 1.90839 1.82339 1.20151 1.51856 1.45410 1.04150 1.10601 1.74435 1.21918 0.87531 0.91660 0.98378 0.89519 1.23580 0.97477 1.00203 0.97096 1.22891 0.92010 1.00801 0.97091 0.86261 1.21412 0.96289 0.98715 0.80960 1.44736 1.10445 1.60595 1.20071 1.18400 0.83954 0.77904 0.80363 1.90911 1.46082 1.47452 1.64326 1.86307 1.37021 1.73846 1.31275 1.22333 0.77435 0.96443 0.94679 1.22475 1.03366 0.94623 1.03302 1.21890 1.04177 1.01487 0.91932 1.22471 0.99539 1.00891 1.00779 1.23279 0.93779 1.03155 0.95869 1.20773 0.91469 1.00161 0.97147 0.91076 0.91679 0.89024 0.84416 0.76123 1.19868 1.18575 0.75057 0.88761 0.91033 0.91051 0.91676 0.74630 0.92044 0.89534 0.91808 0.91055 0.88404 0.91256 0.91777 0.89577 0.91806 0.88739 0.87299 0.83990 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.04 9.77 71.24 0.70 0.74 16 2 C -0.10 -0.08 5.75 -21.05 -0.12 -0.20 16 3 C -0.24 0.61 5.61 24.68 0.14 0.75 16 4 C -0.04 0.17 2.68 71.23 0.19 0.36 16 5 O -0.53 1.21 10.26 -148.98 -1.53 -0.31 16 6 Si 0.73 -4.26 30.96 68.60 2.12 -2.14 16 7 S 0.26 -1.36 19.33 -56.49 -1.09 -2.45 16 8 C -0.28 -0.58 6.45 24.08 0.16 -0.42 16 9 C 0.59 2.94 7.78 86.42 0.67 3.61 16 10 O -0.57 -7.95 16.46 -4.37 -0.07 -8.02 16 11 N -0.69 1.79 5.26 -444.07 -2.34 -0.55 16 12 C 0.11 -0.34 4.30 45.52 0.20 -0.14 16 13 H 0.09 0.17 7.50 -2.38 -0.02 0.16 16 14 C -0.14 0.71 7.45 31.21 0.23 0.95 16 15 C -0.11 0.96 3.64 -10.18 -0.04 0.92 16 16 H 0.12 -1.46 8.14 -2.39 -0.02 -1.47 16 17 C 0.15 -0.60 5.51 86.38 0.48 -0.13 16 18 N -0.70 1.14 5.56 -590.86 -3.29 -2.15 16 19 C 0.64 3.61 8.06 129.79 1.05 4.65 16 20 O -0.60 -6.75 11.88 19.80 0.24 -6.52 16 21 O -0.37 -1.73 9.94 -55.46 -0.55 -2.28 16 22 C 0.13 0.31 1.13 -10.80 -0.01 0.30 16 23 C -0.18 -0.56 8.37 71.98 0.60 0.04 16 24 C -0.14 0.35 8.85 71.98 0.64 0.99 16 25 C -0.18 -0.46 8.37 71.98 0.60 0.14 16 26 C -0.12 1.03 7.38 31.12 0.23 1.26 16 27 C -0.06 -0.22 9.78 21.72 0.21 -0.01 16 28 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 29 H 0.06 -0.04 8.11 -2.39 -0.02 -0.06 16 30 H 0.09 -0.04 5.49 -2.39 -0.01 -0.06 16 31 H 0.14 -0.86 7.96 -2.39 -0.02 -0.88 16 32 H 0.39 -2.82 8.70 -74.06 -0.64 -3.46 16 33 H -0.27 -0.28 7.11 99.48 0.71 0.43 16 34 H -0.26 0.64 7.11 99.48 0.71 1.35 16 35 H 0.41 -3.48 7.82 -92.71 -0.72 -4.20 16 36 H 0.09 -0.38 7.90 -2.39 -0.02 -0.40 16 37 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 38 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 39 H 0.06 -0.10 7.85 -2.39 -0.02 -0.12 16 40 H 0.42 -2.58 8.58 -92.71 -0.80 -3.38 16 41 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 42 H 0.09 -0.02 8.14 -2.38 -0.02 -0.04 16 43 H 0.06 0.54 5.88 -2.39 -0.01 0.52 16 44 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 45 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 46 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 47 H 0.06 0.51 5.88 -2.39 -0.01 0.49 16 48 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 49 H 0.06 0.10 8.14 -2.38 -0.02 0.08 16 50 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 51 H 0.11 -0.96 8.10 -2.39 -0.02 -0.98 16 52 H 0.14 0.74 8.06 -2.91 -0.02 0.71 16 Total: 0.00 -22.68 430.29 -1.75 -24.43 By element: Atomic # 1 Polarization: -12.67 SS G_CDS: -1.16 Total: -13.83 kcal Atomic # 6 Polarization: 7.90 SS G_CDS: 5.92 Total: 13.82 kcal Atomic # 7 Polarization: 2.92 SS G_CDS: -5.62 Total: -2.70 kcal Atomic # 8 Polarization: -15.21 SS G_CDS: -1.92 Total: -17.13 kcal Atomic # 14 Polarization: -4.26 SS G_CDS: 2.12 Total: -2.14 kcal Atomic # 16 Polarization: -1.36 SS G_CDS: -1.09 Total: -2.45 kcal Total: -22.68 -1.75 -24.43 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_6739946.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.115 kcal (2) G-P(sol) polarization free energy of solvation -22.679 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.794 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.750 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.429 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds