Wall clock time and date at job start Sat Mar 6 2021 20:02:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53006 * 109.47249 * 2 1 4 4 C 1.53000 * 109.47137 * 240.00548 * 2 1 3 5 5 O 1.45198 * 109.47475 * 120.00165 * 2 1 3 6 6 C 1.34637 * 116.99722 * 60.00180 * 5 2 1 7 7 O 1.21510 * 120.00195 * 359.97438 * 6 5 2 8 8 N 1.34783 * 120.00031 * 180.02562 * 6 5 2 9 9 C 1.46500 * 120.00119 * 179.97438 * 8 6 5 10 10 C 1.52995 * 109.47108 * 179.97438 * 9 8 6 11 11 H 1.09002 * 112.85043 * 314.66487 * 10 9 8 12 12 C 1.53785 * 113.69093 * 85.93603 * 10 9 8 13 13 C 1.53779 * 87.08093 * 139.99088 * 12 10 9 14 14 H 1.08994 * 113.61314 * 220.01752 * 13 12 10 15 15 N 1.46502 * 113.69134 * 89.12362 * 13 12 10 16 16 C 1.34780 * 119.99583 * 107.46310 * 15 13 12 17 17 O 1.21635 * 120.00038 * 0.02562 * 16 15 13 18 18 C 1.47194 * 119.99757 * 180.02562 * 16 15 13 19 19 C 1.36009 * 123.45900 * 359.69662 * 18 16 15 20 20 S 1.70447 * 110.81551 * 179.89718 * 19 18 16 21 21 C 1.75507 * 92.44512 * 0.32078 * 20 19 18 22 22 C 1.50698 * 124.71176 * 179.84944 * 21 20 19 23 23 O 1.42894 * 109.47335 * 244.95933 * 22 21 20 24 24 Si 1.86295 * 109.47417 * 4.96484 * 22 21 20 25 25 C 1.32771 * 110.57445 * 359.82225 * 21 20 19 26 26 C 1.53781 * 113.61293 * 183.47228 * 10 9 8 27 27 H 1.08998 * 109.47173 * 299.99724 * 1 2 3 28 28 H 1.09000 * 109.47094 * 59.99848 * 1 2 3 29 29 H 1.09002 * 109.47194 * 179.97438 * 1 2 3 30 30 H 1.08992 * 109.47334 * 179.97438 * 3 2 1 31 31 H 1.08996 * 109.47012 * 300.00824 * 3 2 1 32 32 H 1.09007 * 109.46696 * 60.00225 * 3 2 1 33 33 H 1.09002 * 109.46957 * 299.99997 * 4 2 1 34 34 H 1.09000 * 109.47451 * 59.99823 * 4 2 1 35 35 H 1.09003 * 109.47276 * 179.97438 * 4 2 1 36 36 H 0.96997 * 119.99419 * 359.97438 * 8 6 5 37 37 H 1.09005 * 109.46936 * 59.99437 * 9 8 6 38 38 H 1.09004 * 109.46937 * 300.00111 * 9 8 6 39 39 H 1.09003 * 113.60734 * 254.54208 * 12 10 9 40 40 H 1.08996 * 113.61146 * 25.43706 * 12 10 9 41 41 H 0.96999 * 120.00301 * 287.47041 * 15 13 12 42 42 H 1.07998 * 124.59211 * 0.02562 * 19 18 16 43 43 H 1.09005 * 109.46747 * 124.96634 * 22 21 20 44 44 H 0.96701 * 114.00097 * 60.00885 * 23 22 21 45 45 H 1.48500 * 110.00226 * 179.97438 * 24 22 21 46 46 H 1.48501 * 109.99831 * 301.31717 * 24 22 21 47 47 H 1.08002 * 123.45688 * 179.97438 * 25 21 20 48 48 H 1.09005 * 113.61302 * 334.47929 * 26 10 9 49 49 H 1.08993 * 113.62030 * 105.38774 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7211 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3382 7 8 0.9509 -2.5094 0.5039 8 7 2.0674 -2.6655 2.4170 9 6 1.6733 -4.0667 2.5834 10 6 2.2736 -4.6148 3.8796 11 1 3.3222 -4.3460 4.0073 12 6 1.4117 -4.3416 5.1236 13 6 1.7741 -5.7615 5.5897 14 1 0.9421 -6.2964 6.0475 15 7 2.9997 -5.8235 6.3900 16 6 2.9272 -6.0470 7.7172 17 8 1.8443 -6.1976 8.2503 18 6 4.1584 -6.1087 8.5214 19 6 5.4044 -5.9563 7.9979 20 16 6.5920 -6.0836 9.2139 21 6 5.3907 -6.3589 10.4634 22 6 5.7036 -6.5811 11.9207 23 8 5.3150 -7.9042 12.2950 24 14 7.5326 -6.3677 12.2027 25 6 4.1678 -6.3437 9.9464 26 6 1.9886 -6.1087 4.1070 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 3.1299 1.4426 0.0005 31 1 1.6766 1.9564 -0.8899 32 1 1.6767 1.9563 0.8901 33 1 1.6766 -1.7488 -1.2494 34 1 1.6766 -0.2073 -2.1393 35 1 3.1300 -0.7207 -1.2496 36 1 2.6269 -2.2366 3.0831 37 1 2.0397 -4.6500 1.7386 38 1 0.5864 -4.1356 2.6283 39 1 1.8094 -3.5561 5.7663 40 1 0.3526 -4.2120 4.9011 41 1 3.8632 -5.7036 5.9648 42 1 5.6130 -5.7767 6.9536 43 1 5.1559 -5.8572 12.5243 44 1 5.7637 -8.6015 11.7975 45 1 7.8541 -6.5836 13.6364 46 1 8.2916 -7.3276 11.3614 47 1 3.2722 -6.4921 10.5314 48 1 1.0870 -6.4623 3.6066 49 1 2.8518 -6.7500 3.9292 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13437852_6894386.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:02:35 Heat of formation + Delta-G solvation = -91.666106 kcal Electronic energy + Delta-G solvation = -30294.375738 eV Core-core repulsion = 25929.731321 eV Total energy + Delta-G solvation = -4364.644417 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.149 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.78576 -41.41164 -39.98918 -38.80000 -38.18617 -37.17252 -35.84106 -34.93358 -34.14935 -31.78678 -29.14027 -28.32089 -28.27962 -27.02597 -26.91879 -25.95883 -24.10432 -22.85286 -22.30502 -21.18864 -20.63264 -20.38176 -19.07577 -18.99940 -18.18812 -17.74879 -17.60076 -17.23115 -16.99842 -16.47300 -16.34489 -16.08697 -15.99543 -15.65342 -15.60590 -15.36203 -15.02609 -14.90054 -14.51032 -14.39639 -14.09116 -13.99989 -13.80086 -13.63782 -13.56053 -13.41201 -13.24292 -12.98368 -12.84163 -12.81668 -12.73435 -12.44259 -12.36228 -12.26655 -12.20115 -11.87073 -11.79179 -11.46545 -11.27907 -10.98294 -10.95253 -10.78039 -10.23774 -10.16327 -10.07013 -9.57932 -5.15753 -0.43581 0.27457 0.62237 0.84528 1.12965 1.21098 1.45970 1.82485 1.91970 1.97988 2.28770 3.06772 3.20094 3.25334 3.43832 3.47468 3.55105 3.65571 3.76218 3.78773 3.83955 3.88961 3.98083 4.01626 4.21004 4.36900 4.41406 4.46224 4.56420 4.57514 4.58194 4.63634 4.64010 4.68187 4.75490 4.78775 4.84647 4.87725 4.89719 4.93942 4.96002 5.01583 5.08638 5.15824 5.22229 5.37278 5.45290 5.47512 5.61496 6.25382 6.36556 6.42150 7.14509 7.44107 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.366 6.366 6 C 0.649 3.351 7 O -0.567 6.567 8 N -0.711 5.711 9 C 0.147 3.853 10 C -0.127 4.127 11 H 0.098 0.902 12 C -0.146 4.146 13 C 0.120 3.880 14 H 0.108 0.892 15 N -0.710 5.710 16 C 0.581 3.419 17 O -0.528 6.528 18 C -0.156 4.156 19 C -0.207 4.207 20 S 0.199 5.801 21 C -0.241 4.241 22 C -0.033 4.033 23 O -0.522 6.522 24 Si 0.649 3.351 25 C -0.053 4.053 26 C -0.133 4.133 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.059 0.941 36 H 0.406 0.594 37 H 0.073 0.927 38 H 0.075 0.925 39 H 0.075 0.925 40 H 0.097 0.903 41 H 0.399 0.601 42 H 0.171 0.829 43 H 0.128 0.872 44 H 0.378 0.622 45 H -0.233 1.233 46 H -0.238 1.238 47 H 0.157 0.843 48 H 0.103 0.897 49 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.721 2.497 -1.555 6.433 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.402 3.598 7 O -0.456 6.456 8 N -0.371 5.371 9 C 0.025 3.975 10 C -0.145 4.145 11 H 0.116 0.884 12 C -0.185 4.185 13 C 0.015 3.985 14 H 0.126 0.874 15 N -0.361 5.361 16 C 0.367 3.633 17 O -0.405 6.405 18 C -0.174 4.174 19 C -0.345 4.345 20 S 0.465 5.535 21 C -0.358 4.358 22 C -0.145 4.145 23 O -0.329 6.329 24 Si 0.548 3.452 25 C -0.082 4.082 26 C -0.172 4.172 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.240 0.760 37 H 0.091 0.909 38 H 0.093 0.907 39 H 0.094 0.906 40 H 0.115 0.885 41 H 0.234 0.766 42 H 0.188 0.812 43 H 0.146 0.854 44 H 0.226 0.774 45 H -0.156 1.156 46 H -0.162 1.162 47 H 0.174 0.826 48 H 0.121 0.879 49 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 6.520 2.218 -0.954 6.953 hybrid contribution -1.247 -0.795 -0.492 1.559 sum 5.273 1.423 -1.446 5.650 Atomic orbital electron populations 1.22521 0.93845 1.05048 1.02711 1.22113 0.94454 0.91553 0.81873 1.21878 1.02302 0.92373 1.03342 1.22521 1.01565 1.03452 0.96563 1.86302 1.71520 1.23481 1.46727 1.18119 0.78865 0.80637 0.82197 1.90923 1.40902 1.70500 1.43247 1.44704 1.55908 1.12730 1.23735 1.21370 1.00161 0.78764 0.97212 1.22908 1.00443 0.97012 0.94173 0.88415 1.23551 1.00933 0.97629 0.96379 1.21823 0.88187 0.97531 0.90963 0.87350 1.45495 1.09321 1.73777 1.07532 1.17609 0.88191 0.75993 0.81508 1.90835 1.29250 1.49027 1.71351 1.20236 0.92591 1.10086 0.94463 1.25792 0.97422 1.05989 1.05289 1.83182 1.08295 1.66508 0.95468 1.24752 0.96855 1.13491 1.00689 1.24411 1.12599 0.87351 0.90184 1.86651 1.67648 1.14335 1.64229 0.95272 0.73958 0.91530 0.84468 1.21063 0.98018 0.96998 0.92094 1.23310 1.03744 0.95160 0.94994 0.92115 0.90939 0.89438 0.91416 0.89933 0.91399 0.89444 0.90938 0.92149 0.75953 0.90860 0.90699 0.90641 0.88499 0.76604 0.81187 0.85403 0.77447 1.15646 1.16237 0.82557 0.87859 0.90213 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 2 C 0.14 0.18 1.13 -90.62 -0.10 0.08 16 3 C -0.14 0.10 8.85 37.16 0.33 0.43 16 4 C -0.18 -0.24 8.37 37.16 0.31 0.08 16 5 O -0.37 -0.86 9.94 -40.31 -0.40 -1.26 16 6 C 0.65 1.72 8.06 54.06 0.44 2.15 16 7 O -0.57 -2.89 11.88 -19.28 -0.23 -3.12 16 8 N -0.71 0.43 5.56 -65.28 -0.36 0.06 16 9 C 0.15 -0.26 5.50 -4.04 -0.02 -0.29 16 10 C -0.13 0.48 3.63 -89.81 -0.33 0.16 16 11 H 0.10 -0.48 8.14 -51.93 -0.42 -0.90 16 12 C -0.15 0.36 7.44 -25.92 -0.19 0.17 16 13 C 0.12 -0.20 4.32 -67.11 -0.29 -0.49 16 14 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 15 N -0.71 1.11 5.24 -54.16 -0.28 0.82 16 16 C 0.58 1.08 7.79 -12.62 -0.10 0.98 16 17 O -0.53 -3.18 16.40 5.25 0.09 -3.09 16 18 C -0.16 -0.07 5.98 -104.63 -0.63 -0.69 16 19 C -0.21 0.47 10.38 29.93 0.31 0.78 16 20 S 0.20 -0.46 20.20 -107.50 -2.17 -2.63 16 21 C -0.24 0.15 5.65 -36.18 -0.20 -0.06 16 22 C -0.03 0.03 2.94 36.00 0.11 0.14 16 23 O -0.52 -0.36 12.88 -35.23 -0.45 -0.81 16 24 Si 0.65 -1.20 30.92 -169.99 -5.26 -6.46 16 25 C -0.05 -0.06 9.95 -39.02 -0.39 -0.45 16 26 C -0.13 0.49 7.39 -25.92 -0.19 0.30 16 27 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 28 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.09 0.31 5.88 -51.93 -0.31 0.00 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.07 -0.05 8.14 -51.92 -0.42 -0.48 16 33 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 35 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 36 H 0.41 -1.02 8.58 -40.82 -0.35 -1.37 16 37 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.07 -0.07 7.88 -51.93 -0.41 -0.48 16 39 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.10 -0.21 7.92 -51.93 -0.41 -0.63 16 41 H 0.40 -1.72 7.20 -40.82 -0.29 -2.01 16 42 H 0.17 -0.90 7.01 -52.49 -0.37 -1.27 16 43 H 0.13 -0.21 7.96 -51.93 -0.41 -0.62 16 44 H 0.38 -0.86 8.70 45.56 0.40 -0.46 16 45 H -0.23 -0.26 7.11 56.52 0.40 0.14 16 46 H -0.24 0.10 7.11 56.52 0.40 0.51 16 47 H 0.16 0.33 8.06 -52.49 -0.42 -0.09 16 48 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 49 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 LS Contribution 413.18 15.07 6.23 6.23 Total: 0.00 -9.17 413.18 -11.02 -20.20 By element: Atomic # 1 Polarization: -5.74 SS G_CDS: -7.54 Total: -13.28 kcal Atomic # 6 Polarization: 3.99 SS G_CDS: -0.64 Total: 3.35 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -0.65 Total: 0.89 kcal Atomic # 8 Polarization: -7.28 SS G_CDS: -1.00 Total: -8.28 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.26 Total: -6.46 kcal Atomic # 16 Polarization: -0.46 SS G_CDS: -2.17 Total: -2.63 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -9.17 -11.02 -20.20 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13437852_6894386.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.470 kcal (2) G-P(sol) polarization free energy of solvation -9.173 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.643 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.196 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.666 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds