Wall clock time and date at job start Sun Mar 7 2021 03:18:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.47306 * 2 1 4 4 C 1.50703 * 109.46839 * 119.99615 * 2 1 3 5 5 C 1.35454 * 126.07047 * 245.02130 * 4 2 1 6 6 N 1.35534 * 108.87307 * 179.75013 * 5 4 2 7 7 C 1.37652 * 108.64146 * 0.37501 * 6 5 4 8 8 C 1.46680 * 126.23118 * 179.88732 * 7 6 5 9 9 O 1.21689 * 120.00162 * 179.69498 * 8 7 6 10 10 N 1.34773 * 119.99626 * 359.69574 * 8 7 6 11 11 C 1.46506 * 119.99759 * 179.97438 * 10 8 7 12 12 H 1.08997 * 109.47152 * 35.00409 * 11 10 8 13 13 C 1.53001 * 109.46915 * 155.00125 * 11 10 8 14 14 C 1.52999 * 109.47020 * 180.02562 * 13 11 10 15 15 C 1.52998 * 109.47135 * 299.99780 * 14 13 11 16 16 H 1.08997 * 109.47357 * 300.00314 * 15 14 13 17 17 C 1.50694 * 109.47536 * 179.97438 * 15 14 13 18 18 N 1.30641 * 119.25334 * 335.00247 * 17 15 14 19 19 C 1.33524 * 121.50686 * 179.97438 * 18 17 15 20 20 C 1.36202 * 119.90626 * 0.25495 * 19 18 17 21 21 C 1.41015 * 118.59699 * 359.48912 * 20 19 18 22 22 O 1.21983 * 120.71216 * 180.28813 * 21 20 19 23 23 N 1.34750 * 119.25536 * 154.97832 * 17 15 14 24 24 C 1.53003 * 109.47192 * 59.99880 * 15 14 13 25 25 C 1.52999 * 109.47178 * 300.00093 * 24 15 14 26 26 C 1.37867 * 107.53383 * 359.63079 * 7 6 5 27 27 H 0.96700 * 113.99914 * 300.00355 * 1 2 3 28 28 H 1.08996 * 109.47211 * 239.99499 * 2 1 3 29 29 H 1.48504 * 109.99762 * 299.99564 * 3 2 1 30 30 H 1.48492 * 110.00091 * 61.31430 * 3 2 1 31 31 H 1.07995 * 125.55801 * 359.94525 * 5 4 2 32 32 H 0.96991 * 125.67456 * 180.26965 * 6 5 4 33 33 H 0.97001 * 120.00324 * 359.97438 * 10 8 7 34 34 H 1.09002 * 109.47402 * 60.00046 * 13 11 10 35 35 H 1.09001 * 109.47210 * 299.99502 * 13 11 10 36 36 H 1.09000 * 109.47388 * 179.97438 * 14 13 11 37 37 H 1.09002 * 109.47150 * 59.99703 * 14 13 11 38 38 H 1.08002 * 120.04250 * 179.97438 * 19 18 17 39 39 H 1.07999 * 120.69931 * 179.74867 * 20 19 18 40 40 H 0.96998 * 120.04253 * 0.02562 * 23 17 15 41 41 H 1.09002 * 109.47039 * 60.00110 * 24 15 14 42 42 H 1.08995 * 109.47393 * 180.02562 * 24 15 14 43 43 H 1.09002 * 109.47653 * 300.00107 * 25 24 15 44 44 H 1.08998 * 109.47165 * 179.97438 * 25 24 15 45 45 H 1.08011 * 126.45438 * 180.25764 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6330 -0.1497 2.2445 6 7 2.9002 -1.1016 3.1716 7 6 2.3680 -2.2961 2.7418 8 6 2.4354 -3.5795 3.4487 9 8 1.9180 -4.5688 2.9645 10 7 3.0702 -3.6630 4.6346 11 6 3.1370 -4.9448 5.3411 12 1 3.2215 -5.7549 4.6167 13 6 4.3578 -4.9558 6.2633 14 6 4.4279 -6.2946 7.0005 15 6 3.1584 -6.4856 7.8328 16 1 3.0736 -5.6758 8.5574 17 6 3.2271 -7.8045 8.5585 18 7 3.9695 -8.7630 8.0719 19 6 4.0636 -9.9490 8.6781 20 6 3.3713 -10.1806 9.8280 21 6 2.5743 -9.1443 10.3565 22 8 1.9423 -9.3081 11.3869 23 7 2.5217 -7.9683 9.6949 24 6 1.9375 -6.4745 6.9106 25 6 1.8674 -5.1357 6.1734 26 6 1.7553 -2.0652 1.5285 27 1 -0.3933 0.4417 0.7650 28 1 1.7923 -0.5139 -0.8899 29 1 1.5616 2.4678 -1.2086 30 1 1.5879 2.4586 1.2241 31 1 2.9283 0.8873 2.3057 32 1 3.3867 -0.9642 3.9993 33 1 3.4829 -2.8745 5.0205 34 1 4.2733 -4.1457 6.9876 35 1 5.2623 -4.8202 5.6703 36 1 5.2979 -6.3027 7.6572 37 1 4.5126 -7.1045 6.2759 38 1 4.6842 -10.7249 8.2548 39 1 3.4349 -11.1364 10.3268 40 1 1.9772 -7.2424 10.0374 41 1 2.0222 -7.2844 6.1860 42 1 1.0331 -6.6101 7.5035 43 1 1.7828 -4.3258 6.8979 44 1 0.9979 -5.1280 5.5161 45 1 1.2365 -2.7935 0.9227 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_10543058.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:18:28 Heat of formation + Delta-G solvation = -21.484622 kcal Electronic energy + Delta-G solvation = -29182.329534 eV Core-core repulsion = 24974.029495 eV Total energy + Delta-G solvation = -4208.300039 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.89447 -42.53590 -40.85343 -39.46065 -38.38657 -37.77001 -35.94236 -35.20550 -32.94697 -32.37915 -32.08059 -30.98761 -29.95881 -26.71907 -25.90579 -25.41465 -24.08686 -23.99017 -22.53527 -21.46875 -21.11088 -20.72647 -19.99154 -19.75493 -19.10310 -17.91868 -17.68942 -17.28648 -17.10092 -16.96776 -16.50035 -16.07572 -15.96956 -15.70612 -15.60833 -15.43265 -15.40901 -14.92668 -14.62366 -14.58699 -14.37090 -14.12887 -14.05997 -13.84425 -13.62709 -13.48023 -13.38012 -12.72553 -12.55400 -12.43041 -12.41042 -12.08586 -11.85743 -11.82761 -11.55509 -11.25769 -11.15137 -11.11547 -10.50294 -10.27949 -10.01447 -9.58863 -9.36225 -4.97935 -0.49631 0.36460 0.76137 1.29701 1.49543 1.52995 1.56618 1.85571 1.96023 1.99738 2.33120 2.52286 2.63939 3.20711 3.34989 3.46257 3.48907 3.57411 3.66260 3.74011 3.84990 3.91371 3.93907 3.99007 4.05201 4.11164 4.19740 4.22198 4.30625 4.36807 4.48342 4.52852 4.68908 4.75365 4.78704 4.81821 4.86258 4.88068 4.95189 5.00442 5.05020 5.15052 5.28533 5.39157 5.40790 5.55021 5.75247 6.14815 6.35392 6.52027 6.66865 6.77365 7.07564 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.040 4.040 3 Si 0.683 3.317 4 C -0.208 4.208 5 C 0.035 3.965 6 N -0.535 5.535 7 C -0.059 4.059 8 C 0.591 3.409 9 O -0.521 6.521 10 N -0.730 5.730 11 C 0.144 3.856 12 H 0.096 0.904 13 C -0.128 4.128 14 C -0.095 4.095 15 C -0.046 4.046 16 H 0.101 0.899 17 C 0.403 3.597 18 N -0.532 5.532 19 C 0.156 3.844 20 C -0.293 4.293 21 C 0.520 3.480 22 O -0.537 6.537 23 N -0.627 5.627 24 C -0.109 4.109 25 C -0.127 4.127 26 C -0.075 4.075 27 H 0.374 0.626 28 H 0.116 0.884 29 H -0.258 1.258 30 H -0.261 1.261 31 H 0.175 0.825 32 H 0.418 0.582 33 H 0.394 0.606 34 H 0.069 0.931 35 H 0.078 0.922 36 H 0.076 0.924 37 H 0.090 0.910 38 H 0.171 0.829 39 H 0.157 0.843 40 H 0.417 0.583 41 H 0.081 0.919 42 H 0.071 0.929 43 H 0.068 0.932 44 H 0.078 0.922 45 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.260 6.171 0.415 8.800 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.151 4.151 3 Si 0.585 3.415 4 C -0.215 4.215 5 C -0.101 4.101 6 N -0.132 5.132 7 C -0.171 4.171 8 C 0.379 3.621 9 O -0.397 6.397 10 N -0.381 5.381 11 C 0.040 3.960 12 H 0.114 0.886 13 C -0.166 4.166 14 C -0.134 4.134 15 C -0.066 4.066 16 H 0.119 0.881 17 C 0.138 3.862 18 N -0.256 5.256 19 C 0.018 3.982 20 C -0.317 4.317 21 C 0.318 3.682 22 O -0.415 6.415 23 N -0.266 5.266 24 C -0.148 4.148 25 C -0.166 4.166 26 C -0.101 4.101 27 H 0.221 0.779 28 H 0.133 0.867 29 H -0.183 1.183 30 H -0.186 1.186 31 H 0.192 0.808 32 H 0.255 0.745 33 H 0.227 0.773 34 H 0.088 0.912 35 H 0.097 0.903 36 H 0.095 0.905 37 H 0.109 0.891 38 H 0.188 0.812 39 H 0.175 0.825 40 H 0.256 0.744 41 H 0.100 0.900 42 H 0.090 0.910 43 H 0.087 0.913 44 H 0.096 0.904 45 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 6.008 5.585 -0.372 8.212 hybrid contribution -1.281 0.407 2.131 2.520 sum 4.727 5.992 1.759 7.832 Atomic orbital electron populations 1.86615 1.18069 1.79842 1.49091 1.24332 0.83362 1.09978 0.97451 0.95393 0.91279 0.74507 0.80368 1.19845 1.07544 0.95129 0.99011 1.21897 1.02965 0.94751 0.90533 1.41916 1.44149 1.07803 1.19282 1.20424 1.10981 0.86065 0.99669 1.17045 0.78207 0.86701 0.80151 1.90886 1.45954 1.36073 1.66738 1.45942 1.58065 1.12500 1.21590 1.21072 0.94725 0.86143 0.94033 0.88555 1.21859 0.97804 0.98411 0.98525 1.21365 0.95249 0.97519 0.99259 1.20553 0.98973 0.89567 0.97549 0.88135 1.23184 0.84356 0.96348 0.82355 1.68294 1.22476 1.01487 1.33324 1.22767 0.92391 0.92936 0.90103 1.22978 1.05094 1.02027 1.01609 1.17363 0.83686 0.82235 0.84913 1.91031 1.46300 1.80565 1.23569 1.44773 1.41354 1.17664 1.22770 1.21567 0.95785 0.99065 0.98376 1.21911 0.98779 0.96788 0.99112 1.21239 0.99109 0.95675 0.94090 0.77887 0.86660 1.18297 1.18595 0.80769 0.74474 0.77309 0.91183 0.90309 0.90540 0.89093 0.81200 0.82499 0.74394 0.90024 0.91014 0.91336 0.90379 0.83193 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.76 12.88 -35.23 -0.45 -1.22 16 2 C -0.04 0.02 3.02 36.01 0.11 0.13 16 3 Si 0.68 -1.42 30.60 -169.99 -5.20 -6.62 16 4 C -0.21 0.11 5.43 -105.02 -0.57 -0.46 16 5 C 0.04 -0.10 10.45 -16.91 -0.18 -0.28 16 6 N -0.54 1.87 5.99 -9.39 -0.06 1.82 16 7 C -0.06 0.00 7.06 -81.98 -0.58 -0.57 16 8 C 0.59 0.50 7.75 -12.85 -0.10 0.40 16 9 O -0.52 -2.62 16.54 5.20 0.09 -2.54 16 10 N -0.73 2.14 5.07 -55.11 -0.28 1.86 16 11 C 0.14 -0.43 2.45 -67.92 -0.17 -0.60 16 12 H 0.10 -0.06 7.58 -51.93 -0.39 -0.46 16 13 C -0.13 0.65 5.39 -26.73 -0.14 0.50 16 14 C -0.10 0.40 4.67 -26.73 -0.12 0.28 16 15 C -0.05 0.20 2.48 -91.77 -0.23 -0.03 16 16 H 0.10 -0.62 8.14 -51.93 -0.42 -1.05 16 17 C 0.40 -0.71 6.73 -155.57 -1.05 -1.76 16 18 N -0.53 0.28 9.11 -10.63 -0.10 0.18 16 19 C 0.16 -0.11 11.20 -17.55 -0.20 -0.30 16 20 C -0.29 -0.30 10.07 -39.26 -0.40 -0.70 16 21 C 0.52 1.52 7.75 -15.09 -0.12 1.41 16 22 O -0.54 -3.85 17.97 4.93 0.09 -3.76 16 23 N -0.63 0.50 5.25 -12.27 -0.06 0.44 16 24 C -0.11 0.39 5.18 -26.73 -0.14 0.25 16 25 C -0.13 0.40 5.50 -26.73 -0.15 0.25 16 26 C -0.07 -0.11 10.59 -39.12 -0.41 -0.52 16 27 H 0.37 -0.57 8.70 45.56 0.40 -0.18 16 28 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 29 H -0.26 -0.46 7.11 56.52 0.40 -0.06 16 30 H -0.26 0.16 7.11 56.52 0.40 0.56 16 31 H 0.18 -0.98 6.21 -52.49 -0.33 -1.31 16 32 H 0.42 -2.91 8.19 -40.82 -0.33 -3.25 16 33 H 0.39 -2.34 7.73 -40.82 -0.32 -2.65 16 34 H 0.07 -0.44 8.14 -51.93 -0.42 -0.86 16 35 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 36 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 37 H 0.09 -0.26 7.76 -51.93 -0.40 -0.66 16 38 H 0.17 -0.58 8.06 -52.49 -0.42 -1.00 16 39 H 0.16 0.02 8.06 -52.49 -0.42 -0.40 16 40 H 0.42 -1.25 8.78 -40.82 -0.36 -1.61 16 41 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 42 H 0.07 -0.27 8.14 -51.93 -0.42 -0.70 16 43 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 44 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 45 H 0.15 0.38 8.06 -52.48 -0.42 -0.05 16 LS Contribution 375.57 15.07 5.66 5.66 Total: 0.00 -12.91 375.57 -10.75 -23.66 By element: Atomic # 1 Polarization: -11.49 SS G_CDS: -6.00 Total: -17.49 kcal Atomic # 6 Polarization: 2.44 SS G_CDS: -4.43 Total: -2.00 kcal Atomic # 7 Polarization: 4.80 SS G_CDS: -0.50 Total: 4.30 kcal Atomic # 8 Polarization: -7.23 SS G_CDS: -0.28 Total: -7.51 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.20 Total: -6.62 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -12.91 -10.75 -23.66 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_10543058.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.173 kcal (2) G-P(sol) polarization free energy of solvation -12.909 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.658 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.485 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds