Wall clock time and date at job start Sun Mar 7 2021 03:18:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.35536 * 125.67797 * 2 1 4 4 C 1.35450 * 108.87409 * 180.26167 * 3 2 1 5 5 C 1.50703 * 126.06681 * 179.73998 * 4 3 2 6 6 O 1.42901 * 109.46730 * 120.02824 * 5 4 3 7 7 Si 1.86301 * 109.47359 * 0.02855 * 5 4 3 8 8 C 1.39834 * 107.86508 * 359.76715 * 4 3 2 9 9 C 1.37645 * 125.68371 * 179.86086 * 2 1 3 10 10 C 1.46680 * 126.23027 * 0.02562 * 9 2 1 11 11 O 1.21702 * 120.00151 * 4.41009 * 10 9 2 12 12 N 1.34777 * 120.00446 * 184.40892 * 10 9 2 13 13 C 1.46493 * 120.00245 * 174.41435 * 12 10 9 14 14 H 1.09000 * 109.47295 * 35.00020 * 13 12 10 15 15 C 1.53000 * 109.47076 * 155.00067 * 13 12 10 16 16 C 1.53006 * 109.47090 * 180.02562 * 15 13 12 17 17 C 1.53002 * 109.46867 * 299.99750 * 16 15 13 18 18 H 1.09000 * 109.47240 * 300.00227 * 17 16 15 19 19 C 1.50697 * 109.47141 * 180.02562 * 17 16 15 20 20 N 1.30643 * 119.25396 * 264.72944 * 19 17 16 21 21 C 1.33517 * 121.50418 * 179.75837 * 20 19 17 22 22 C 1.36202 * 119.91114 * 0.50636 * 21 20 19 23 23 C 1.41016 * 118.59173 * 359.75791 * 22 21 20 24 24 O 1.21982 * 120.70789 * 180.02562 * 23 22 21 25 25 N 1.34750 * 119.25794 * 84.99602 * 19 17 16 26 26 C 1.53000 * 109.47062 * 60.00232 * 17 16 15 27 27 C 1.52998 * 109.46867 * 299.99657 * 26 17 16 28 28 H 1.09000 * 109.47205 * 270.87671 * 1 2 3 29 29 H 1.09000 * 109.47338 * 30.87827 * 1 2 3 30 30 H 1.09004 * 109.47096 * 150.87710 * 1 2 3 31 31 H 1.08008 * 125.56163 * 359.97438 * 3 2 1 32 32 H 1.08993 * 109.47334 * 240.02230 * 5 4 3 33 33 H 0.96700 * 113.99999 * 180.02562 * 6 5 4 34 34 H 1.48503 * 109.99663 * 298.68050 * 7 5 4 35 35 H 1.48501 * 109.99902 * 59.99327 * 7 5 4 36 36 H 1.07996 * 126.45895 * 180.02562 * 8 4 3 37 37 H 0.97001 * 119.99222 * 354.41227 * 12 10 9 38 38 H 1.09000 * 109.47566 * 60.00083 * 15 13 12 39 39 H 1.08998 * 109.47286 * 299.99438 * 15 13 12 40 40 H 1.08998 * 109.47165 * 179.97438 * 16 15 13 41 41 H 1.09000 * 109.47376 * 59.99894 * 16 15 13 42 42 H 1.08002 * 120.04667 * 180.26171 * 21 20 19 43 43 H 1.07999 * 120.70349 * 179.77425 * 22 21 20 44 44 H 0.97001 * 120.03688 * 0.02562 * 25 19 17 45 45 H 1.08990 * 109.47089 * 59.99940 * 26 17 16 46 46 H 1.08997 * 109.46837 * 180.02562 * 26 17 16 47 47 H 1.08998 * 109.46942 * 180.02562 * 27 26 17 48 48 H 1.09000 * 109.47466 * 300.00024 * 27 26 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5521 0.7094 -0.0059 5 6 4.7536 1.6191 -0.0134 6 8 5.5461 1.3709 1.1495 7 14 4.1885 3.3943 -0.0127 8 6 3.5780 -0.6887 -0.0043 9 6 2.2679 -1.1180 0.0027 10 6 1.8125 -2.5123 0.0056 11 8 0.6247 -2.7648 -0.0754 12 7 2.7094 -3.5141 0.0978 13 6 2.2500 -4.8994 0.2240 14 1 1.3372 -5.0338 -0.3564 15 6 3.3320 -5.8453 -0.3009 16 6 2.8519 -7.2922 -0.1697 17 6 2.5710 -7.6048 1.3014 18 1 3.4837 -7.4708 1.8821 19 6 2.0987 -9.0300 1.4308 20 7 0.8163 -9.2777 1.4573 21 6 0.3484 -10.5235 1.5658 22 6 1.2161 -11.5689 1.6620 23 6 2.6004 -11.3013 1.6388 24 8 3.4117 -12.2084 1.7218 25 7 3.0087 -10.0197 1.5220 26 6 1.4891 -6.6589 1.8263 27 6 1.9692 -5.2121 1.6951 28 1 -0.3633 0.0157 1.0275 29 1 -0.3634 0.8820 -0.5274 30 1 -0.3633 -0.8978 -0.5002 31 1 1.9081 2.1237 -0.0004 32 1 5.3487 1.4275 -0.9062 33 1 6.3379 1.9227 1.2110 34 1 3.3898 3.6735 -1.2331 35 1 3.3759 3.6682 1.1997 36 1 4.4583 -1.3143 -0.0074 37 1 3.6592 -3.3177 0.0806 38 1 4.2448 -5.7110 0.2794 39 1 3.5317 -5.6229 -1.3491 40 1 3.6225 -7.9660 -0.5441 41 1 1.9392 -7.4262 -0.7503 42 1 -0.7167 -10.7017 1.5812 43 1 0.8516 -12.5814 1.7539 44 1 3.9560 -9.8114 1.5044 45 1 0.5764 -6.7930 1.2458 46 1 1.2893 -6.8814 2.8745 47 1 1.1986 -4.5383 2.0695 48 1 2.8819 -5.0781 2.2757 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_10803934.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:18:30 Heat of formation + Delta-G solvation = -18.250017 kcal Electronic energy + Delta-G solvation = -31540.447237 eV Core-core repulsion = 27176.749841 eV Total energy + Delta-G solvation = -4363.697395 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -42.90723 -42.65086 -40.79021 -39.49311 -38.45895 -37.57711 -35.92984 -35.26907 -34.05782 -32.70703 -31.82650 -31.26657 -29.78662 -28.40894 -26.09094 -25.63737 -25.33380 -24.04791 -23.60914 -22.39380 -21.25712 -20.97836 -20.33481 -19.76903 -19.16025 -18.69826 -18.18554 -17.82541 -17.32891 -17.22633 -16.99559 -16.74556 -16.06686 -15.79201 -15.64705 -15.55784 -15.30602 -15.12049 -15.06956 -14.95693 -14.51960 -14.43871 -14.14349 -14.13440 -13.96669 -13.69465 -13.44522 -13.29982 -13.20273 -13.17192 -12.51852 -12.44543 -12.33638 -12.12809 -12.08039 -11.94952 -11.57227 -11.41803 -11.35052 -11.13647 -11.06661 -10.23576 -10.17272 -9.73755 -9.67475 -9.36983 -4.91065 -0.46188 0.29972 0.67665 1.31619 1.44566 1.51414 1.56115 1.73155 2.05606 2.21125 2.26981 2.49965 2.77568 3.40426 3.53149 3.59296 3.62633 3.68139 3.71216 3.73419 3.94315 3.98114 4.05705 4.15378 4.16981 4.21680 4.26824 4.34789 4.36629 4.39165 4.48943 4.52611 4.56009 4.61535 4.66259 4.73969 4.80545 4.87840 4.99561 5.06586 5.09628 5.15856 5.22140 5.28700 5.34264 5.36727 5.47003 5.51162 5.59576 5.80165 5.98612 6.44998 6.66922 6.71046 7.05743 7.09963 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.414 5.414 3 C 0.004 3.996 4 C -0.181 4.181 5 C -0.038 4.038 6 O -0.566 6.566 7 Si 0.771 3.229 8 C -0.106 4.106 9 C -0.073 4.073 10 C 0.590 3.410 11 O -0.581 6.581 12 N -0.700 5.700 13 C 0.145 3.855 14 H 0.070 0.930 15 C -0.115 4.115 16 C -0.104 4.104 17 C -0.040 4.040 18 H 0.133 0.867 19 C 0.410 3.590 20 N -0.548 5.548 21 C 0.172 3.828 22 C -0.318 4.318 23 C 0.510 3.490 24 O -0.592 6.592 25 N -0.613 5.613 26 C -0.090 4.090 27 C -0.124 4.124 28 H 0.081 0.919 29 H 0.104 0.896 30 H 0.095 0.905 31 H 0.171 0.829 32 H 0.091 0.909 33 H 0.401 0.599 34 H -0.290 1.290 35 H -0.301 1.301 36 H 0.171 0.829 37 H 0.416 0.584 38 H 0.100 0.900 39 H 0.083 0.917 40 H 0.090 0.910 41 H 0.067 0.933 42 H 0.196 0.804 43 H 0.159 0.841 44 H 0.430 0.570 45 H 0.071 0.929 46 H 0.070 0.930 47 H 0.047 0.953 48 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.018 7.152 -1.624 8.887 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.086 5.086 3 C -0.132 4.132 4 C -0.188 4.188 5 C -0.149 4.149 6 O -0.375 6.375 7 Si 0.678 3.322 8 C -0.132 4.132 9 C -0.186 4.186 10 C 0.378 3.622 11 O -0.463 6.463 12 N -0.351 5.351 13 C 0.041 3.959 14 H 0.088 0.912 15 C -0.153 4.153 16 C -0.143 4.143 17 C -0.060 4.060 18 H 0.151 0.849 19 C 0.146 3.854 20 N -0.271 5.271 21 C 0.032 3.968 22 C -0.342 4.342 23 C 0.311 3.689 24 O -0.475 6.475 25 N -0.251 5.251 26 C -0.128 4.128 27 C -0.162 4.162 28 H 0.100 0.900 29 H 0.123 0.877 30 H 0.113 0.887 31 H 0.188 0.812 32 H 0.109 0.891 33 H 0.252 0.748 34 H -0.217 1.217 35 H -0.229 1.229 36 H 0.188 0.812 37 H 0.254 0.746 38 H 0.118 0.882 39 H 0.102 0.898 40 H 0.109 0.891 41 H 0.086 0.914 42 H 0.213 0.787 43 H 0.176 0.824 44 H 0.271 0.729 45 H 0.090 0.910 46 H 0.089 0.911 47 H 0.066 0.934 48 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 2.313 6.874 -1.542 7.415 hybrid contribution 0.527 -1.109 0.074 1.230 sum 2.841 5.765 -1.468 6.592 Atomic orbital electron populations 1.22441 0.74907 1.06039 1.04596 1.43972 1.07640 1.04793 1.52219 1.21941 0.90788 0.91807 1.08671 1.19182 0.92827 0.94846 1.11922 1.24054 0.92374 1.07283 0.91215 1.86441 1.41365 1.66834 1.42860 0.94361 0.85140 0.76810 0.75899 1.21473 0.94591 0.94521 1.02663 1.20289 0.90890 0.87788 1.19632 1.17061 0.85500 0.83977 0.75624 1.90779 1.17714 1.85196 1.52565 1.45597 1.10081 1.05828 1.73578 1.21110 0.98824 0.79259 0.96710 0.91176 1.21741 0.98060 0.92313 1.03137 1.21529 1.02909 0.97024 0.92841 1.20677 1.01326 0.83961 1.00065 0.84938 1.23680 0.85187 0.92078 0.84440 1.68393 1.11425 1.23289 1.24020 1.23154 1.02398 0.86085 0.85130 1.23004 0.91370 1.03775 1.16072 1.17622 0.91439 0.81710 0.78158 1.90991 1.57544 1.44350 1.54590 1.44597 1.13502 1.07800 1.59182 1.21270 0.97694 0.91896 1.01968 1.21888 1.02140 0.96180 0.96018 0.90015 0.87716 0.88665 0.81238 0.89119 0.74845 1.21734 1.22930 0.81175 0.74599 0.88164 0.89807 0.89138 0.91442 0.78743 0.82372 0.72924 0.90983 0.91106 0.93441 0.89628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.14 10.65 127.77 1.36 1.50 16 2 N -0.41 -2.43 3.16 -534.31 -1.69 -4.12 16 3 C 0.00 0.02 9.94 83.48 0.83 0.85 16 4 C -0.18 -0.67 5.47 -20.12 -0.11 -0.78 16 5 C -0.04 0.08 3.01 71.24 0.21 0.30 16 6 O -0.57 1.15 12.86 -148.98 -1.92 -0.77 16 7 Si 0.77 -2.64 30.59 68.60 2.10 -0.54 16 8 C -0.11 -0.26 10.29 22.57 0.23 -0.03 16 9 C -0.07 -0.40 6.89 40.35 0.28 -0.12 16 10 C 0.59 3.17 7.74 86.45 0.67 3.84 16 11 O -0.58 -6.91 14.26 -4.36 -0.06 -6.98 16 12 N -0.70 1.87 5.06 -446.50 -2.26 -0.39 16 13 C 0.14 -0.62 2.50 44.99 0.11 -0.51 16 14 H 0.07 0.10 7.50 -2.39 -0.02 0.08 16 15 C -0.11 1.24 5.39 30.60 0.16 1.40 16 16 C -0.10 1.05 5.19 30.60 0.16 1.20 16 17 C -0.04 0.37 2.48 -11.54 -0.03 0.34 16 18 H 0.13 -1.93 8.14 -2.39 -0.02 -1.95 16 19 C 0.41 -1.48 6.73 138.18 0.93 -0.55 16 20 N -0.55 0.18 9.11 -187.56 -1.71 -1.53 16 21 C 0.17 -0.12 11.20 83.96 0.94 0.82 16 22 C -0.32 -1.07 10.07 22.48 0.23 -0.84 16 23 C 0.51 3.63 7.75 84.88 0.66 4.29 16 24 O -0.59 -9.69 17.97 -5.26 -0.09 -9.79 16 25 N -0.61 1.04 5.25 -310.70 -1.63 -0.59 16 26 C -0.09 0.47 4.67 30.59 0.14 0.61 16 27 C -0.12 0.54 5.50 30.59 0.17 0.71 16 28 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 29 H 0.10 -0.28 8.14 -2.39 -0.02 -0.30 16 30 H 0.09 0.52 6.19 -2.38 -0.01 0.50 16 31 H 0.17 0.35 6.19 -2.91 -0.02 0.33 16 32 H 0.09 -0.55 7.96 -2.39 -0.02 -0.57 16 33 H 0.40 -4.99 8.74 -74.06 -0.65 -5.64 16 34 H -0.29 -0.54 7.11 99.48 0.71 0.16 16 35 H -0.30 -1.35 7.11 99.48 0.71 -0.64 16 36 H 0.17 -0.62 7.45 -2.91 -0.02 -0.64 16 37 H 0.42 -3.39 7.50 -92.71 -0.70 -4.09 16 38 H 0.10 -1.49 8.14 -2.39 -0.02 -1.51 16 39 H 0.08 -0.88 8.14 -2.39 -0.02 -0.90 16 40 H 0.09 -1.12 8.14 -2.39 -0.02 -1.14 16 41 H 0.07 -0.44 8.14 -2.39 -0.02 -0.46 16 42 H 0.20 -1.30 8.06 -2.91 -0.02 -1.32 16 43 H 0.16 0.34 8.06 -2.91 -0.02 0.32 16 44 H 0.43 -2.97 8.78 -92.71 -0.81 -3.78 16 45 H 0.07 -0.10 7.76 -2.39 -0.02 -0.12 16 46 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 47 H 0.05 0.08 8.14 -2.39 -0.02 0.06 16 48 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 Total: 0.00 -32.78 393.54 -1.41 -34.19 By element: Atomic # 1 Polarization: -21.42 SS G_CDS: -1.09 Total: -22.51 kcal Atomic # 6 Polarization: 6.08 SS G_CDS: 6.95 Total: 13.03 kcal Atomic # 7 Polarization: 0.66 SS G_CDS: -7.29 Total: -6.63 kcal Atomic # 8 Polarization: -15.46 SS G_CDS: -2.07 Total: -17.53 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: 2.10 Total: -0.54 kcal Total: -32.78 -1.41 -34.19 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_10803934.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.938 kcal (2) G-P(sol) polarization free energy of solvation -32.779 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.840 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.188 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.250 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds