Wall clock time and date at job start Sun Mar 7 2021 03:18:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46508 * 1 3 3 C 1.37640 * 125.67849 * 2 1 4 4 C 1.46680 * 126.23473 * 359.97438 * 3 2 1 5 5 O 1.21699 * 119.99986 * 354.81168 * 4 3 2 6 6 N 1.34783 * 120.00169 * 174.53739 * 4 3 2 7 7 C 1.46496 * 120.00009 * 185.10968 * 6 4 3 8 8 H 1.09004 * 109.47339 * 325.00220 * 7 6 4 9 9 C 1.53000 * 109.47062 * 84.99836 * 7 6 4 10 10 C 1.52994 * 109.47329 * 179.97438 * 9 7 6 11 11 C 1.53005 * 109.47288 * 300.00487 * 10 9 7 12 12 H 1.08996 * 109.46702 * 299.99933 * 11 10 9 13 13 C 1.50694 * 109.47241 * 179.97438 * 11 10 9 14 14 N 1.30633 * 119.25636 * 265.00063 * 13 11 10 15 15 C 1.33532 * 121.50996 * 179.97438 * 14 13 11 16 16 C 1.36203 * 119.90482 * 359.97438 * 15 14 13 17 17 C 1.41028 * 118.59268 * 0.02562 * 16 15 14 18 18 O 1.21982 * 120.70318 * 179.97438 * 17 16 15 19 19 N 1.34751 * 119.25186 * 84.72496 * 13 11 10 20 20 C 1.53000 * 109.46994 * 59.99684 * 11 10 9 21 21 C 1.53002 * 109.46873 * 205.00090 * 7 6 4 22 22 C 1.37875 * 107.53223 * 180.23943 * 3 2 1 23 23 C 1.39827 * 107.08677 * 359.61960 * 22 3 2 24 24 C 1.35459 * 107.86418 * 0.38382 * 23 22 3 25 25 C 1.50703 * 125.56340 * 179.76082 * 24 23 22 26 26 O 1.42901 * 109.46964 * 209.99697 * 25 24 23 27 27 Si 1.86296 * 109.47210 * 329.99763 * 25 24 23 28 28 H 1.08997 * 109.47064 * 94.58788 * 1 2 3 29 29 H 1.09006 * 109.46660 * 214.58671 * 1 2 3 30 30 H 1.09000 * 109.47004 * 334.58535 * 1 2 3 31 31 H 0.97002 * 119.99508 * 5.11409 * 6 4 3 32 32 H 1.09002 * 109.47017 * 300.00227 * 9 7 6 33 33 H 1.09004 * 109.46730 * 60.00011 * 9 7 6 34 34 H 1.08994 * 109.47382 * 180.02562 * 10 9 7 35 35 H 1.09009 * 109.46890 * 59.99951 * 10 9 7 36 36 H 1.07991 * 120.04749 * 179.97438 * 15 14 13 37 37 H 1.07996 * 120.70088 * 180.02562 * 16 15 14 38 38 H 0.96996 * 120.04218 * 0.02711 * 19 13 11 39 39 H 1.08999 * 109.46890 * 180.02562 * 20 11 10 40 40 H 1.08996 * 109.47192 * 60.00550 * 20 11 10 41 41 H 1.08997 * 109.46829 * 299.99422 * 21 7 6 42 42 H 1.08994 * 109.47241 * 60.00090 * 21 7 6 43 43 H 1.08000 * 126.45564 * 179.75415 * 22 3 2 44 44 H 1.08001 * 126.07037 * 180.14374 * 23 22 3 45 45 H 1.09006 * 109.46803 * 89.99779 * 25 24 23 46 46 H 0.96697 * 113.99960 * 60.00237 * 26 25 24 47 47 H 1.48497 * 109.99975 * 58.68248 * 27 25 24 48 48 H 1.48500 * 110.00079 * 179.97438 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2679 1.1181 0.0000 4 6 1.8125 2.5124 -0.0005 5 8 0.6258 2.7649 -0.0963 6 7 2.7077 3.5138 0.1107 7 6 2.2464 4.8997 0.2228 8 1 1.3475 5.0333 -0.3792 9 6 1.9313 5.2154 1.6864 10 6 1.4501 6.6629 1.8037 11 6 2.5452 7.6067 1.3026 12 1 3.4438 7.4726 1.9047 13 6 2.0709 9.0325 1.4176 14 7 1.5266 9.6099 0.3799 15 6 1.0904 10.8709 0.4318 16 6 1.2087 11.5833 1.5865 17 6 1.7964 10.9601 2.7069 18 8 1.9219 11.5625 3.7601 19 7 2.2128 9.6811 2.5901 20 6 2.8601 7.2909 -0.1610 21 6 3.3411 5.8437 -0.2785 22 6 3.5780 0.6887 -0.0055 23 6 3.5522 -0.7094 0.0001 24 6 2.2555 -1.1010 0.0000 25 6 1.7709 -2.5280 0.0000 26 8 0.5129 -2.6038 -0.6736 27 14 3.0115 -3.6051 -0.8782 28 1 -0.3633 -0.0822 -1.0243 29 1 -0.3633 -0.8461 0.5834 30 1 -0.3633 0.9282 0.4410 31 1 3.6575 3.3168 0.1163 32 1 1.1515 4.5428 2.0435 33 1 2.8301 5.0818 2.2884 34 1 1.2261 6.8880 2.8464 35 1 0.5514 6.7970 1.2015 36 1 0.6445 11.3251 -0.4406 37 1 0.8599 12.6039 1.6430 38 1 2.6167 9.2308 3.3484 39 1 3.6406 7.9630 -0.5178 40 1 1.9615 7.4250 -0.7631 41 1 4.2397 5.7101 0.3237 42 1 3.5654 5.6188 -1.3211 43 1 4.4584 1.3143 -0.0107 44 1 4.4133 -1.3613 0.0001 45 1 1.6541 -2.8720 1.0277 46 1 0.5420 -2.3124 -1.5952 47 1 4.3322 -3.5103 -0.2062 48 1 2.5455 -5.0151 -0.8845 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_10803936.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:18:35 Heat of formation + Delta-G solvation = -17.258488 kcal Electronic energy + Delta-G solvation = -31637.103440 eV Core-core repulsion = 27273.449041 eV Total energy + Delta-G solvation = -4363.654399 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.87389 -42.60129 -40.82808 -39.43824 -38.37124 -37.79866 -35.92874 -35.21751 -33.81635 -32.67959 -32.06620 -31.45393 -30.06192 -27.48372 -26.98484 -25.73399 -25.24800 -23.95709 -23.40868 -22.51010 -21.40118 -21.20965 -20.33543 -19.75738 -19.14005 -18.86765 -18.17169 -17.80664 -17.32076 -17.01447 -16.92756 -16.45804 -16.10786 -15.91122 -15.59756 -15.54852 -15.49069 -15.34092 -14.95016 -14.82168 -14.51261 -14.43431 -14.37296 -14.13391 -14.03985 -13.73940 -13.59259 -13.38813 -13.22623 -13.03249 -12.65451 -12.50807 -12.36158 -12.27114 -12.06034 -12.03423 -11.80802 -11.50025 -11.21228 -11.12190 -11.01417 -10.74251 -10.17593 -9.76704 -9.57073 -9.11229 -5.06886 -0.47682 0.39830 0.77998 1.08950 1.45414 1.55372 1.65120 1.68534 1.94926 2.30761 2.38153 2.54249 2.66974 3.18070 3.24190 3.39405 3.49985 3.51531 3.59709 3.69141 3.78720 3.95621 3.96461 3.97926 4.11593 4.15451 4.22786 4.26466 4.27431 4.33286 4.40566 4.41839 4.48202 4.50652 4.57856 4.76540 4.78757 4.82639 4.85827 4.91662 4.96274 4.98326 5.08030 5.11260 5.21085 5.37554 5.42070 5.42931 5.67950 5.96118 6.11647 6.32854 6.43716 6.68920 6.79177 7.15680 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.067 3.933 2 N -0.390 5.390 3 C -0.053 4.053 4 C 0.592 3.408 5 O -0.544 6.544 6 N -0.717 5.717 7 C 0.146 3.854 8 H 0.096 0.904 9 C -0.127 4.127 10 C -0.108 4.108 11 C -0.046 4.046 12 H 0.101 0.899 13 C 0.403 3.597 14 N -0.533 5.533 15 C 0.156 3.844 16 C -0.293 4.293 17 C 0.520 3.480 18 O -0.537 6.537 19 N -0.627 5.627 20 C -0.095 4.095 21 C -0.128 4.128 22 C -0.135 4.135 23 C -0.205 4.205 24 C 0.015 3.985 25 C -0.050 4.050 26 O -0.543 6.543 27 Si 0.723 3.277 28 H 0.078 0.922 29 H 0.090 0.910 30 H 0.099 0.901 31 H 0.403 0.597 32 H 0.075 0.925 33 H 0.070 0.930 34 H 0.071 0.929 35 H 0.080 0.920 36 H 0.171 0.829 37 H 0.157 0.843 38 H 0.417 0.583 39 H 0.076 0.924 40 H 0.090 0.910 41 H 0.071 0.929 42 H 0.079 0.921 43 H 0.146 0.854 44 H 0.147 0.853 45 H 0.119 0.881 46 H 0.380 0.620 47 H -0.252 1.252 48 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.850 -3.461 -4.497 6.857 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 N -0.063 5.063 3 C -0.167 4.167 4 C 0.381 3.619 5 O -0.423 6.423 6 N -0.368 5.368 7 C 0.042 3.958 8 H 0.114 0.886 9 C -0.166 4.166 10 C -0.147 4.147 11 C -0.067 4.067 12 H 0.119 0.881 13 C 0.138 3.862 14 N -0.256 5.256 15 C 0.018 3.982 16 C -0.318 4.318 17 C 0.318 3.682 18 O -0.415 6.415 19 N -0.266 5.266 20 C -0.134 4.134 21 C -0.166 4.166 22 C -0.161 4.161 23 C -0.229 4.229 24 C -0.103 4.103 25 C -0.160 4.160 26 O -0.348 6.348 27 Si 0.622 3.378 28 H 0.096 0.904 29 H 0.109 0.891 30 H 0.118 0.882 31 H 0.238 0.762 32 H 0.093 0.907 33 H 0.089 0.911 34 H 0.089 0.911 35 H 0.099 0.901 36 H 0.188 0.812 37 H 0.175 0.825 38 H 0.256 0.744 39 H 0.095 0.905 40 H 0.108 0.892 41 H 0.090 0.910 42 H 0.098 0.902 43 H 0.164 0.836 44 H 0.164 0.836 45 H 0.136 0.864 46 H 0.228 0.772 47 H -0.176 1.176 48 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges 2.759 -3.881 -4.120 6.297 hybrid contribution 0.436 0.651 1.695 1.867 sum 3.196 -3.230 -2.425 5.150 Atomic orbital electron populations 1.22362 0.75419 1.05426 1.04167 1.43758 1.07024 1.04015 1.51457 1.20037 0.90487 0.87501 1.18659 1.16974 0.85592 0.83523 0.75849 1.90809 1.16295 1.84753 1.50471 1.45675 1.09842 1.06060 1.75180 1.21053 0.98778 0.79392 0.96623 0.88645 1.21914 1.02287 0.95703 0.96669 1.21561 0.97761 0.93516 1.01900 1.20562 0.99680 0.85573 1.00868 0.88050 1.23198 0.87564 0.94655 0.80776 1.68295 1.18457 1.12537 1.26306 1.22765 0.89550 0.88332 0.97546 1.22977 1.10639 1.04472 0.93668 1.17362 0.80016 0.80375 0.90444 1.91030 1.57573 1.62706 1.30189 1.44772 1.52137 1.15076 1.14574 1.21359 1.03521 0.95139 0.93352 1.21848 0.97904 0.94264 1.02603 1.21275 0.94384 0.95149 1.05305 1.20646 0.95070 0.95456 1.11710 1.21127 0.90948 0.89215 1.09002 1.24971 0.94159 0.94558 1.02351 1.86498 1.29972 1.89087 1.29281 0.94007 0.76350 0.77728 0.89693 0.90389 0.89128 0.88236 0.76177 0.90674 0.91138 0.91075 0.90123 0.81225 0.82522 0.74378 0.90528 0.89174 0.91000 0.90199 0.83646 0.83574 0.86400 0.77196 1.17649 1.17776 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.03 9.27 59.85 0.56 0.58 16 2 N -0.39 -0.44 3.16 -115.61 -0.37 -0.81 16 3 C -0.05 -0.06 6.88 -81.98 -0.56 -0.62 16 4 C 0.59 0.79 7.74 -12.85 -0.10 0.69 16 5 O -0.54 -2.37 14.27 5.19 0.07 -2.30 16 6 N -0.72 1.44 5.06 -55.11 -0.28 1.17 16 7 C 0.15 -0.38 2.49 -67.93 -0.17 -0.55 16 8 H 0.10 -0.04 7.51 -51.93 -0.39 -0.43 16 9 C -0.13 0.37 5.49 -26.73 -0.15 0.22 16 10 C -0.11 0.37 5.19 -26.73 -0.14 0.23 16 11 C -0.05 0.19 2.48 -91.77 -0.23 -0.04 16 12 H 0.10 -0.60 8.14 -51.93 -0.42 -1.02 16 13 C 0.40 -0.65 6.73 -155.57 -1.05 -1.70 16 14 N -0.53 0.21 9.11 -10.64 -0.10 0.12 16 15 C 0.16 -0.09 11.20 -17.54 -0.20 -0.29 16 16 C -0.29 -0.33 10.07 -39.26 -0.40 -0.73 16 17 C 0.52 1.58 7.75 -15.09 -0.12 1.47 16 18 O -0.54 -3.91 17.97 4.94 0.09 -3.82 16 19 N -0.63 0.41 5.25 -12.27 -0.06 0.35 16 20 C -0.10 0.37 4.67 -26.75 -0.12 0.25 16 21 C -0.13 0.59 5.39 -26.75 -0.14 0.44 16 22 C -0.13 0.07 10.35 -39.12 -0.41 -0.33 16 23 C -0.20 0.05 9.37 -39.98 -0.37 -0.32 16 24 C 0.02 0.00 6.14 -81.95 -0.50 -0.50 16 25 C -0.05 0.06 2.90 36.01 0.10 0.16 16 26 O -0.54 0.63 10.49 -35.23 -0.37 0.27 16 27 Si 0.72 -1.63 31.29 -169.99 -5.32 -6.95 16 28 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.09 0.00 7.10 -51.93 -0.37 -0.37 16 30 H 0.10 0.19 6.18 -51.93 -0.32 -0.13 16 31 H 0.40 -1.75 7.51 -40.82 -0.31 -2.05 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 34 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 35 H 0.08 -0.17 8.14 -51.92 -0.42 -0.59 16 36 H 0.17 -0.56 8.06 -52.49 -0.42 -0.98 16 37 H 0.16 0.04 8.06 -52.49 -0.42 -0.39 16 38 H 0.42 -1.19 8.78 -40.82 -0.36 -1.54 16 39 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 40 H 0.09 -0.24 7.75 -51.93 -0.40 -0.64 16 41 H 0.07 -0.41 8.14 -51.93 -0.42 -0.83 16 42 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 43 H 0.15 -0.50 7.45 -52.49 -0.39 -0.89 16 44 H 0.15 -0.22 6.62 -52.49 -0.35 -0.56 16 45 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16 46 H 0.38 -1.67 8.70 45.56 0.40 -1.27 16 47 H -0.25 0.08 6.76 56.52 0.38 0.46 16 48 H -0.25 -0.21 7.11 56.52 0.40 0.20 16 LS Contribution 389.57 15.07 5.87 5.87 Total: 0.00 -11.28 389.57 -11.23 -22.50 By element: Atomic # 1 Polarization: -8.59 SS G_CDS: -6.77 Total: -15.36 kcal Atomic # 6 Polarization: 2.97 SS G_CDS: -3.99 Total: -1.03 kcal Atomic # 7 Polarization: 1.62 SS G_CDS: -0.81 Total: 0.82 kcal Atomic # 8 Polarization: -5.65 SS G_CDS: -0.21 Total: -5.85 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.32 Total: -6.95 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -11.28 -11.23 -22.50 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_10803936.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.244 kcal (2) G-P(sol) polarization free energy of solvation -11.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.032 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.226 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.258 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds