Wall clock time and date at job start Sun Mar 7 2021 03:18:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46508 * 1 3 3 C 1.37640 * 125.67849 * 2 1 4 4 C 1.46680 * 126.23473 * 359.97438 * 3 2 1 5 5 O 1.21699 * 119.99986 * 354.81168 * 4 3 2 6 6 N 1.34783 * 120.00169 * 174.53739 * 4 3 2 7 7 C 1.46496 * 120.00009 * 185.10968 * 6 4 3 8 8 H 1.09004 * 109.47339 * 325.00220 * 7 6 4 9 9 C 1.53000 * 109.47062 * 84.99836 * 7 6 4 10 10 C 1.52994 * 109.47329 * 179.97438 * 9 7 6 11 11 C 1.53005 * 109.47288 * 300.00487 * 10 9 7 12 12 H 1.08996 * 109.46702 * 299.99933 * 11 10 9 13 13 C 1.50694 * 109.47241 * 179.97438 * 11 10 9 14 14 N 1.30633 * 119.25636 * 265.00063 * 13 11 10 15 15 C 1.33532 * 121.50996 * 179.97438 * 14 13 11 16 16 C 1.36203 * 119.90482 * 359.97438 * 15 14 13 17 17 C 1.41028 * 118.59268 * 0.02562 * 16 15 14 18 18 O 1.21982 * 120.70318 * 179.97438 * 17 16 15 19 19 N 1.34751 * 119.25186 * 84.72496 * 13 11 10 20 20 C 1.53000 * 109.46994 * 59.99684 * 11 10 9 21 21 C 1.53002 * 109.46873 * 205.00090 * 7 6 4 22 22 C 1.37875 * 107.53223 * 180.23943 * 3 2 1 23 23 C 1.39827 * 107.08677 * 359.61960 * 22 3 2 24 24 C 1.35459 * 107.86418 * 0.38382 * 23 22 3 25 25 C 1.50703 * 125.56340 * 179.76082 * 24 23 22 26 26 O 1.42901 * 109.46964 * 209.99697 * 25 24 23 27 27 Si 1.86296 * 109.47210 * 329.99763 * 25 24 23 28 28 H 1.08997 * 109.47064 * 94.58788 * 1 2 3 29 29 H 1.09006 * 109.46660 * 214.58671 * 1 2 3 30 30 H 1.09000 * 109.47004 * 334.58535 * 1 2 3 31 31 H 0.97002 * 119.99508 * 5.11409 * 6 4 3 32 32 H 1.09002 * 109.47017 * 300.00227 * 9 7 6 33 33 H 1.09004 * 109.46730 * 60.00011 * 9 7 6 34 34 H 1.08994 * 109.47382 * 180.02562 * 10 9 7 35 35 H 1.09009 * 109.46890 * 59.99951 * 10 9 7 36 36 H 1.07991 * 120.04749 * 179.97438 * 15 14 13 37 37 H 1.07996 * 120.70088 * 180.02562 * 16 15 14 38 38 H 0.96996 * 120.04218 * 0.02711 * 19 13 11 39 39 H 1.08999 * 109.46890 * 180.02562 * 20 11 10 40 40 H 1.08996 * 109.47192 * 60.00550 * 20 11 10 41 41 H 1.08997 * 109.46829 * 299.99422 * 21 7 6 42 42 H 1.08994 * 109.47241 * 60.00090 * 21 7 6 43 43 H 1.08000 * 126.45564 * 179.75415 * 22 3 2 44 44 H 1.08001 * 126.07037 * 180.14374 * 23 22 3 45 45 H 1.09006 * 109.46803 * 89.99779 * 25 24 23 46 46 H 0.96697 * 113.99960 * 60.00237 * 26 25 24 47 47 H 1.48497 * 109.99975 * 58.68248 * 27 25 24 48 48 H 1.48500 * 110.00079 * 179.97438 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2679 1.1181 0.0000 4 6 1.8125 2.5124 -0.0005 5 8 0.6258 2.7649 -0.0963 6 7 2.7077 3.5138 0.1107 7 6 2.2464 4.8997 0.2228 8 1 1.3475 5.0333 -0.3792 9 6 1.9313 5.2154 1.6864 10 6 1.4501 6.6629 1.8037 11 6 2.5452 7.6067 1.3026 12 1 3.4438 7.4726 1.9047 13 6 2.0709 9.0325 1.4176 14 7 1.5266 9.6099 0.3799 15 6 1.0904 10.8709 0.4318 16 6 1.2087 11.5833 1.5865 17 6 1.7964 10.9601 2.7069 18 8 1.9219 11.5625 3.7601 19 7 2.2128 9.6811 2.5901 20 6 2.8601 7.2909 -0.1610 21 6 3.3411 5.8437 -0.2785 22 6 3.5780 0.6887 -0.0055 23 6 3.5522 -0.7094 0.0001 24 6 2.2555 -1.1010 0.0000 25 6 1.7709 -2.5280 0.0000 26 8 0.5129 -2.6038 -0.6736 27 14 3.0115 -3.6051 -0.8782 28 1 -0.3633 -0.0822 -1.0243 29 1 -0.3633 -0.8461 0.5834 30 1 -0.3633 0.9282 0.4410 31 1 3.6575 3.3168 0.1163 32 1 1.1515 4.5428 2.0435 33 1 2.8301 5.0818 2.2884 34 1 1.2261 6.8880 2.8464 35 1 0.5514 6.7970 1.2015 36 1 0.6445 11.3251 -0.4406 37 1 0.8599 12.6039 1.6430 38 1 2.6167 9.2308 3.3484 39 1 3.6406 7.9630 -0.5178 40 1 1.9615 7.4250 -0.7631 41 1 4.2397 5.7101 0.3237 42 1 3.5654 5.6188 -1.3211 43 1 4.4584 1.3143 -0.0107 44 1 4.4133 -1.3613 0.0001 45 1 1.6541 -2.8720 1.0277 46 1 0.5420 -2.3124 -1.5952 47 1 4.3322 -3.5103 -0.2062 48 1 2.5455 -5.0151 -0.8845 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_10803936.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:18:34 Heat of formation + Delta-G solvation = -19.735750 kcal Electronic energy + Delta-G solvation = -31637.210862 eV Core-core repulsion = 27273.449041 eV Total energy + Delta-G solvation = -4363.761821 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.89760 -42.57697 -40.75711 -39.47578 -38.44114 -37.70863 -35.89891 -35.22669 -33.79884 -32.66961 -31.81554 -31.41512 -29.96536 -27.47698 -26.93550 -25.71253 -25.23009 -23.73694 -23.34504 -22.41856 -21.32622 -21.06103 -20.27317 -19.76432 -19.17481 -18.81471 -18.08187 -17.79169 -17.28088 -17.07255 -16.91785 -16.40407 -16.05213 -15.86941 -15.62506 -15.45397 -15.40663 -15.18130 -14.89574 -14.77548 -14.46207 -14.44011 -14.34524 -14.05173 -13.98703 -13.69188 -13.43015 -13.24874 -13.14328 -13.02059 -12.48860 -12.33039 -12.21026 -12.11118 -12.02847 -12.00757 -11.59341 -11.38391 -11.30398 -11.09050 -11.04553 -10.68309 -10.10959 -9.74188 -9.66720 -9.08468 -4.90206 -0.45283 0.40145 0.68038 1.20703 1.51794 1.56534 1.74996 1.77517 2.04833 2.35119 2.39326 2.50476 2.78794 3.34116 3.42050 3.56968 3.58830 3.64562 3.72789 3.79712 3.97200 4.00256 4.16951 4.18381 4.29847 4.31126 4.37635 4.37805 4.41558 4.44139 4.50529 4.53139 4.54879 4.66100 4.74166 4.83921 4.88914 5.02276 5.06668 5.08166 5.15623 5.18656 5.24742 5.32778 5.35618 5.44075 5.47767 5.57482 5.75547 6.00824 6.14009 6.54042 6.60136 6.66746 6.71239 7.19609 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.073 3.927 2 N -0.403 5.403 3 C -0.079 4.079 4 C 0.587 3.413 5 O -0.585 6.585 6 N -0.700 5.700 7 C 0.146 3.854 8 H 0.068 0.932 9 C -0.120 4.120 10 C -0.103 4.103 11 C -0.040 4.040 12 H 0.133 0.867 13 C 0.409 3.591 14 N -0.544 5.544 15 C 0.173 3.827 16 C -0.319 4.319 17 C 0.509 3.491 18 O -0.594 6.594 19 N -0.615 5.615 20 C -0.092 4.092 21 C -0.117 4.117 22 C -0.124 4.124 23 C -0.214 4.214 24 C 0.012 3.988 25 C -0.058 4.058 26 O -0.555 6.555 27 Si 0.809 3.191 28 H 0.085 0.915 29 H 0.091 0.909 30 H 0.080 0.920 31 H 0.417 0.583 32 H 0.048 0.952 33 H 0.090 0.910 34 H 0.076 0.924 35 H 0.063 0.937 36 H 0.198 0.802 37 H 0.158 0.842 38 H 0.428 0.572 39 H 0.083 0.917 40 H 0.074 0.926 41 H 0.096 0.904 42 H 0.082 0.918 43 H 0.176 0.824 44 H 0.160 0.840 45 H 0.112 0.888 46 H 0.394 0.606 47 H -0.273 1.273 48 H -0.296 1.296 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.907 -4.023 -5.362 8.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 N -0.076 5.076 3 C -0.192 4.192 4 C 0.376 3.624 5 O -0.467 6.467 6 N -0.351 5.351 7 C 0.042 3.958 8 H 0.086 0.914 9 C -0.159 4.159 10 C -0.142 4.142 11 C -0.060 4.060 12 H 0.150 0.850 13 C 0.145 3.855 14 N -0.267 5.267 15 C 0.034 3.966 16 C -0.343 4.343 17 C 0.310 3.690 18 O -0.476 6.476 19 N -0.253 5.253 20 C -0.131 4.131 21 C -0.155 4.155 22 C -0.150 4.150 23 C -0.238 4.238 24 C -0.106 4.106 25 C -0.167 4.167 26 O -0.363 6.363 27 Si 0.712 3.288 28 H 0.104 0.896 29 H 0.110 0.890 30 H 0.099 0.901 31 H 0.255 0.745 32 H 0.067 0.933 33 H 0.109 0.891 34 H 0.095 0.905 35 H 0.082 0.918 36 H 0.215 0.785 37 H 0.176 0.824 38 H 0.269 0.731 39 H 0.101 0.899 40 H 0.093 0.907 41 H 0.114 0.886 42 H 0.101 0.899 43 H 0.193 0.807 44 H 0.178 0.822 45 H 0.129 0.871 46 H 0.244 0.756 47 H -0.199 1.199 48 H -0.224 1.224 Dipole moment (debyes) X Y Z Total from point charges 4.855 -4.446 -5.003 8.269 hybrid contribution -0.233 0.709 1.906 2.047 sum 4.622 -3.736 -3.097 6.702 Atomic orbital electron populations 1.22247 0.75671 1.04360 1.04467 1.43899 1.07148 1.04506 1.52030 1.20243 0.91307 0.87395 1.20249 1.17182 0.85400 0.84270 0.75542 1.90787 1.18014 1.85314 1.52631 1.45582 1.10174 1.05669 1.73720 1.21071 0.98737 0.79525 0.96513 0.91367 1.21830 1.02232 0.95240 0.96567 1.21487 0.97374 0.93415 1.01958 1.20681 1.00364 0.83443 1.01509 0.84966 1.23723 0.86390 0.95367 0.80006 1.68392 1.18803 1.12662 1.26854 1.23183 0.87812 0.87960 0.97672 1.23003 1.12317 1.05080 0.93930 1.17666 0.79985 0.81212 0.90184 1.90989 1.60316 1.64261 1.32082 1.44634 1.51153 1.14111 1.15358 1.21319 1.03075 0.95707 0.92950 1.21782 0.97697 0.92877 1.03156 1.21663 0.94547 0.95383 1.03401 1.20910 0.95235 0.95946 1.11679 1.21403 0.91234 0.89401 1.08580 1.25183 0.94700 0.94302 1.02503 1.86466 1.30129 1.89157 1.30515 0.92969 0.73622 0.74080 0.88176 0.89624 0.89035 0.90100 0.74508 0.93321 0.89138 0.90513 0.91841 0.78510 0.82393 0.73096 0.89878 0.90740 0.88577 0.89929 0.80697 0.82214 0.87069 0.75609 1.19871 1.22399 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.17 9.27 127.77 1.18 1.36 16 2 N -0.40 -1.16 3.16 -519.68 -1.64 -2.80 16 3 C -0.08 -0.18 6.88 40.35 0.28 0.10 16 4 C 0.59 2.01 7.74 86.45 0.67 2.67 16 5 O -0.59 -6.35 14.27 -4.34 -0.06 -6.41 16 6 N -0.70 3.21 5.06 -446.48 -2.26 0.94 16 7 C 0.15 -0.79 2.49 44.99 0.11 -0.68 16 8 H 0.07 0.04 7.51 -2.38 -0.02 0.02 16 9 C -0.12 0.73 5.49 30.59 0.17 0.90 16 10 C -0.10 0.74 5.19 30.59 0.16 0.90 16 11 C -0.04 0.39 2.48 -11.54 -0.03 0.36 16 12 H 0.13 -2.00 8.14 -2.39 -0.02 -2.02 16 13 C 0.41 -1.63 6.73 138.18 0.93 -0.70 16 14 N -0.54 0.78 9.11 -187.56 -1.71 -0.93 16 15 C 0.17 -0.27 11.20 83.96 0.94 0.67 16 16 C -0.32 -0.99 10.07 22.48 0.23 -0.76 16 17 C 0.51 3.71 7.75 84.89 0.66 4.37 16 18 O -0.59 -9.95 17.97 -5.26 -0.09 -10.04 16 19 N -0.62 0.84 5.25 -310.69 -1.63 -0.79 16 20 C -0.09 0.86 4.67 30.58 0.14 1.00 16 21 C -0.12 1.30 5.39 30.58 0.16 1.46 16 22 C -0.12 0.31 10.35 22.57 0.23 0.54 16 23 C -0.21 0.35 9.37 22.01 0.21 0.55 16 24 C 0.01 0.00 6.14 41.35 0.25 0.25 16 25 C -0.06 0.13 2.90 71.24 0.21 0.34 16 26 O -0.56 1.17 10.49 -148.98 -1.56 -0.39 16 27 Si 0.81 -3.93 31.29 68.60 2.15 -1.78 16 28 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 29 H 0.09 0.14 7.10 -2.38 -0.02 0.12 16 30 H 0.08 0.51 6.18 -2.39 -0.01 0.50 16 31 H 0.42 -4.42 7.51 -92.71 -0.70 -5.11 16 32 H 0.05 0.00 8.14 -2.39 -0.02 -0.02 16 33 H 0.09 -0.89 8.14 -2.38 -0.02 -0.91 16 34 H 0.08 -0.61 8.14 -2.39 -0.02 -0.63 16 35 H 0.06 -0.21 8.14 -2.38 -0.02 -0.23 16 36 H 0.20 -1.54 8.06 -2.91 -0.02 -1.56 16 37 H 0.16 0.31 8.06 -2.91 -0.02 0.28 16 38 H 0.43 -2.59 8.78 -92.71 -0.81 -3.41 16 39 H 0.08 -0.81 8.14 -2.39 -0.02 -0.83 16 40 H 0.07 -0.41 7.75 -2.39 -0.02 -0.43 16 41 H 0.10 -1.45 8.14 -2.39 -0.02 -1.47 16 42 H 0.08 -0.88 8.14 -2.39 -0.02 -0.90 16 43 H 0.18 -1.68 7.45 -2.91 -0.02 -1.70 16 44 H 0.16 -0.75 6.62 -2.91 -0.02 -0.77 16 45 H 0.11 -0.13 7.96 -2.38 -0.02 -0.15 16 46 H 0.39 -3.48 8.70 -74.06 -0.64 -4.13 16 47 H -0.27 0.39 6.76 99.48 0.67 1.06 16 48 H -0.30 -0.70 7.11 99.48 0.71 0.01 16 Total: 0.00 -29.73 389.57 -1.44 -31.17 By element: Atomic # 1 Polarization: -21.17 SS G_CDS: -1.13 Total: -22.29 kcal Atomic # 6 Polarization: 6.83 SS G_CDS: 6.50 Total: 13.33 kcal Atomic # 7 Polarization: 3.66 SS G_CDS: -7.24 Total: -3.58 kcal Atomic # 8 Polarization: -15.13 SS G_CDS: -1.72 Total: -16.85 kcal Atomic # 14 Polarization: -3.93 SS G_CDS: 2.15 Total: -1.78 kcal Total: -29.73 -1.44 -31.17 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_10803936.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.435 kcal (2) G-P(sol) polarization free energy of solvation -29.734 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.299 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.437 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.171 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds