Wall clock time and date at job start Sun Mar 7 2021 03:18:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.35449 * 125.56608 * 2 1 4 4 C 1.50696 * 126.06726 * 359.97030 * 3 2 1 5 5 O 1.42900 * 109.47145 * 149.97743 * 4 3 2 6 6 Si 1.86298 * 109.47150 * 29.98352 * 4 3 2 7 7 C 1.39842 * 107.86386 * 179.71854 * 3 2 1 8 8 C 1.50700 * 126.45672 * 180.26124 * 7 3 2 9 9 C 1.37865 * 107.08284 * 0.41542 * 7 3 2 10 10 C 1.46676 * 126.23153 * 179.85289 * 9 7 3 11 11 O 1.21698 * 120.00309 * 359.70781 * 10 9 7 12 12 N 1.34780 * 120.00185 * 179.71699 * 10 9 7 13 13 C 1.46506 * 120.00088 * 180.02562 * 12 10 9 14 14 H 1.09000 * 109.46872 * 324.99405 * 13 12 10 15 15 C 1.52997 * 109.47277 * 84.99368 * 13 12 10 16 16 C 1.52996 * 109.47165 * 180.02562 * 15 13 12 17 17 C 1.53002 * 109.46972 * 300.00293 * 16 15 13 18 18 H 1.09000 * 109.46986 * 299.99742 * 17 16 15 19 19 C 1.50696 * 109.47306 * 180.02562 * 17 16 15 20 20 N 1.30644 * 119.24973 * 264.99800 * 19 17 16 21 21 C 1.33530 * 121.50456 * 179.97438 * 20 19 17 22 22 C 1.36202 * 119.90838 * 0.02562 * 21 20 19 23 23 C 1.41025 * 118.59378 * 359.97438 * 22 21 20 24 24 O 1.21978 * 120.70576 * 179.97438 * 23 22 21 25 25 N 1.34748 * 119.26036 * 84.72394 * 19 17 16 26 26 C 1.52997 * 109.47415 * 59.99860 * 17 16 15 27 27 C 1.52999 * 109.46691 * 204.99775 * 13 12 10 28 28 N 1.35533 * 125.56070 * 179.97438 * 2 1 3 29 29 H 1.08996 * 109.47456 * 270.00396 * 1 2 3 30 30 H 1.09002 * 109.46741 * 30.00693 * 1 2 3 31 31 H 1.08997 * 109.47467 * 149.99700 * 1 2 3 32 32 H 1.09003 * 109.47721 * 269.98197 * 4 3 2 33 33 H 0.96704 * 114.00296 * 180.02562 * 5 4 3 34 34 H 1.48499 * 110.00293 * 59.99309 * 6 4 3 35 35 H 1.48500 * 110.00231 * 181.31940 * 6 4 3 36 36 H 1.08994 * 109.47055 * 270.20595 * 8 7 3 37 37 H 1.09009 * 109.46994 * 30.20670 * 8 7 3 38 38 H 1.08995 * 109.47175 * 150.20107 * 8 7 3 39 39 H 0.97000 * 119.99750 * 359.97438 * 12 10 9 40 40 H 1.09000 * 109.47140 * 60.00200 * 15 13 12 41 41 H 1.09001 * 109.47375 * 300.00183 * 15 13 12 42 42 H 1.08992 * 109.47534 * 180.02562 * 16 15 13 43 43 H 1.08996 * 109.47134 * 59.99508 * 16 15 13 44 44 H 1.07995 * 120.04322 * 180.02562 * 21 20 19 45 45 H 1.07998 * 120.70146 * 179.97438 * 22 21 20 46 46 H 0.97007 * 120.03495 * 0.02562 * 25 19 17 47 47 H 1.09001 * 109.46922 * 180.02562 * 26 17 16 48 48 H 1.09000 * 109.47140 * 59.99976 * 26 17 16 49 49 H 1.08993 * 109.47839 * 59.99891 * 27 13 12 50 50 H 1.09000 * 109.47160 * 299.99453 * 27 13 12 51 51 H 0.97002 * 125.67803 * 0.02562 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8200 2.5320 -0.0006 5 8 2.7767 3.3518 0.6736 6 14 0.1801 2.6423 0.8764 7 6 3.6270 0.6766 0.0065 8 6 4.8486 1.5590 0.0144 9 6 3.6122 -0.7020 0.0009 10 6 4.7859 -1.5816 0.0015 11 8 5.9049 -1.1032 0.0022 12 7 4.6252 -2.9198 0.0013 13 6 5.7975 -3.7984 0.0025 14 1 6.5937 -3.3426 -0.5861 15 6 6.2796 -4.0036 1.4400 16 6 7.5043 -4.9207 1.4412 17 6 7.1295 -6.2727 0.8309 18 1 6.3335 -6.7289 1.4194 19 6 8.3356 -7.1762 0.8326 20 7 9.0818 -7.2469 -0.2374 21 6 10.1608 -8.0321 -0.2850 22 6 10.5031 -8.7824 0.7989 23 6 9.6977 -8.7063 1.9540 24 8 9.9683 -9.3619 2.9464 25 7 8.6232 -7.8887 1.9396 26 6 6.6475 -6.0675 -0.6066 27 6 5.4222 -5.1503 -0.6076 28 7 2.2952 -1.1026 0.0005 29 1 -0.3634 0.0001 1.0276 30 1 -0.3633 0.8900 -0.5140 31 1 -0.3634 -0.8899 -0.5139 32 1 1.7062 2.8767 -1.0284 33 1 2.5355 4.2875 0.7118 34 1 0.3217 2.1750 2.2789 35 1 -0.3144 4.0424 0.8549 36 1 5.1465 1.7763 -1.0113 37 1 4.6203 2.4910 0.5317 38 1 5.6625 1.0481 0.5287 39 1 3.7333 -3.3011 0.0010 40 1 5.4834 -4.4594 2.0286 41 1 6.5469 -3.0404 1.8746 42 1 7.8474 -5.0673 2.4652 43 1 8.3002 -4.4646 0.8526 44 1 10.7613 -8.0721 -1.1818 45 1 11.3728 -9.4222 0.7743 46 1 8.0566 -7.8174 2.7238 47 1 6.3802 -7.0307 -1.0411 48 1 7.4436 -5.6113 -1.1951 49 1 5.0788 -5.0042 -1.6316 50 1 4.6260 -5.6061 -0.0190 51 1 1.9832 -2.0210 0.0006 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_12297754.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:18:43 Heat of formation + Delta-G solvation = -27.704330 kcal Electronic energy + Delta-G solvation = -33778.087009 eV Core-core repulsion = 29258.442026 eV Total energy + Delta-G solvation = -4519.644984 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -42.87610 -42.61412 -40.81051 -39.41842 -38.35731 -37.77498 -35.91674 -35.18990 -33.62478 -33.40127 -32.41229 -32.03976 -30.31707 -29.28738 -27.39999 -26.42408 -25.68347 -25.19652 -23.96085 -23.08300 -22.04277 -21.31019 -20.50648 -20.06177 -19.76401 -19.29597 -19.02157 -18.36768 -17.84006 -17.34758 -17.00294 -16.69524 -16.48832 -15.98777 -15.92589 -15.60538 -15.55966 -15.38388 -15.05255 -14.99196 -14.82261 -14.45073 -14.31517 -14.24964 -14.08347 -14.02728 -13.92831 -13.77037 -13.57599 -13.34742 -13.15789 -12.88607 -12.70364 -12.63467 -12.49375 -12.37592 -12.24987 -12.06348 -11.81535 -11.73178 -11.50985 -11.21035 -11.12456 -10.89430 -10.51124 -10.19056 -9.57148 -9.39548 -8.93464 -4.83072 -0.47837 0.45139 0.77866 1.20443 1.54929 1.61787 1.73444 1.94130 2.03169 2.07854 2.43167 2.54084 2.66339 3.23371 3.29647 3.39212 3.49560 3.59560 3.67835 3.72597 3.84001 3.94459 3.95942 3.98587 4.09209 4.15016 4.18471 4.22244 4.25343 4.31323 4.40557 4.41586 4.50307 4.56309 4.60450 4.67664 4.75178 4.79898 4.82240 4.85123 4.90985 4.97948 5.01704 5.08693 5.18553 5.22243 5.33992 5.41186 5.42483 5.50264 5.57920 5.78884 6.01298 6.31296 6.47453 6.60293 6.68739 6.79016 7.19914 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C 0.063 3.937 3 C -0.168 4.168 4 C -0.034 4.034 5 O -0.532 6.532 6 Si 0.649 3.351 7 C -0.033 4.033 8 C -0.097 4.097 9 C -0.071 4.071 10 C 0.593 3.407 11 O -0.520 6.520 12 N -0.732 5.732 13 C 0.145 3.855 14 H 0.096 0.904 15 C -0.127 4.127 16 C -0.109 4.109 17 C -0.046 4.046 18 H 0.100 0.900 19 C 0.403 3.597 20 N -0.533 5.533 21 C 0.156 3.844 22 C -0.293 4.293 23 C 0.520 3.480 24 O -0.537 6.537 25 N -0.627 5.627 26 C -0.095 4.095 27 C -0.128 4.128 28 N -0.535 5.535 29 H 0.088 0.912 30 H 0.101 0.899 31 H 0.088 0.912 32 H 0.070 0.930 33 H 0.375 0.625 34 H -0.256 1.256 35 H -0.259 1.259 36 H 0.062 0.938 37 H 0.085 0.915 38 H 0.074 0.926 39 H 0.393 0.607 40 H 0.068 0.932 41 H 0.077 0.923 42 H 0.071 0.929 43 H 0.081 0.919 44 H 0.171 0.829 45 H 0.157 0.843 46 H 0.417 0.583 47 H 0.075 0.925 48 H 0.090 0.910 49 H 0.078 0.922 50 H 0.069 0.931 51 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.082 -0.260 -4.199 10.009 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.055 4.055 3 C -0.175 4.175 4 C -0.144 4.144 5 O -0.338 6.338 6 Si 0.550 3.450 7 C -0.041 4.041 8 C -0.153 4.153 9 C -0.182 4.182 10 C 0.382 3.618 11 O -0.396 6.396 12 N -0.383 5.383 13 C 0.041 3.959 14 H 0.114 0.886 15 C -0.166 4.166 16 C -0.148 4.148 17 C -0.066 4.066 18 H 0.119 0.881 19 C 0.138 3.862 20 N -0.256 5.256 21 C 0.018 3.982 22 C -0.317 4.317 23 C 0.318 3.682 24 O -0.415 6.415 25 N -0.266 5.266 26 C -0.134 4.134 27 C -0.166 4.166 28 N -0.132 5.132 29 H 0.106 0.894 30 H 0.119 0.881 31 H 0.106 0.894 32 H 0.088 0.912 33 H 0.223 0.777 34 H -0.180 1.180 35 H -0.184 1.184 36 H 0.081 0.919 37 H 0.103 0.897 38 H 0.093 0.907 39 H 0.226 0.774 40 H 0.086 0.914 41 H 0.096 0.904 42 H 0.089 0.911 43 H 0.099 0.901 44 H 0.188 0.812 45 H 0.175 0.825 46 H 0.256 0.744 47 H 0.094 0.906 48 H 0.109 0.891 49 H 0.096 0.904 50 H 0.088 0.912 51 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -8.102 -0.429 -3.703 8.919 hybrid contribution 0.182 -0.254 1.173 1.214 sum -7.921 -0.682 -2.530 8.343 Atomic orbital electron populations 1.20402 0.87611 1.03585 1.04160 1.19999 0.93302 0.85680 1.06508 1.18440 0.92862 0.92481 1.13715 1.23935 1.01508 0.88904 1.00052 1.86557 1.45732 1.22255 1.79305 0.95634 0.81449 0.84250 0.83666 1.19795 0.94993 0.90563 0.98742 1.20513 0.93730 0.98912 1.02185 1.20104 0.82747 0.94113 1.21271 1.16999 0.87553 0.81204 0.76089 1.90847 1.24130 1.74890 1.49714 1.45942 1.09599 1.05786 1.76955 1.21041 0.88390 0.89766 0.96677 0.88621 1.21910 0.97280 1.00463 0.96926 1.21564 0.99115 0.92700 1.01384 1.20556 0.91356 0.94011 1.00723 0.88149 1.23195 0.94048 0.87372 0.81597 1.68301 1.08645 1.25027 1.23616 1.22767 0.90377 0.87090 0.97961 1.22977 1.05632 1.09018 0.94115 1.17360 0.80669 0.79964 0.90195 1.91029 1.70715 1.44351 1.35395 1.44771 1.27398 1.37817 1.16568 1.21372 0.97769 1.00485 0.93733 1.21866 0.98550 0.94172 1.02004 1.41656 1.05260 1.08071 1.58239 0.89385 0.88144 0.89376 0.91214 0.77678 1.18018 1.18442 0.91888 0.89651 0.90722 0.77419 0.91375 0.90386 0.91060 0.90056 0.81216 0.82509 0.74388 0.90584 0.89120 0.90361 0.91210 0.74655 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.52 8.21 36.01 0.30 0.81 16 2 C 0.06 -0.08 6.84 -81.95 -0.56 -0.64 16 3 C -0.17 -0.27 5.42 -105.02 -0.57 -0.84 16 4 C -0.03 -0.01 3.03 36.00 0.11 0.10 16 5 O -0.53 -0.77 10.01 -35.23 -0.35 -1.12 16 6 Si 0.65 -0.69 26.76 -169.99 -4.55 -5.24 16 7 C -0.03 -0.11 6.15 -104.16 -0.64 -0.76 16 8 C -0.10 -0.40 9.51 36.01 0.34 -0.06 16 9 C -0.07 -0.12 7.06 -81.98 -0.58 -0.70 16 10 C 0.59 1.16 7.75 -12.85 -0.10 1.06 16 11 O -0.52 -2.89 14.47 5.19 0.08 -2.82 16 12 N -0.73 1.47 5.07 -55.11 -0.28 1.19 16 13 C 0.15 -0.34 2.45 -67.93 -0.17 -0.51 16 14 H 0.10 0.00 7.58 -51.93 -0.39 -0.40 16 15 C -0.13 0.32 5.49 -26.73 -0.15 0.17 16 16 C -0.11 0.34 5.19 -26.73 -0.14 0.20 16 17 C -0.05 0.18 2.48 -91.77 -0.23 -0.05 16 18 H 0.10 -0.58 8.14 -51.93 -0.42 -1.00 16 19 C 0.40 -0.59 6.73 -155.57 -1.05 -1.63 16 20 N -0.53 0.13 9.12 -10.63 -0.10 0.03 16 21 C 0.16 -0.07 11.20 -17.55 -0.20 -0.26 16 22 C -0.29 -0.37 10.07 -39.26 -0.40 -0.76 16 23 C 0.52 1.65 7.75 -15.09 -0.12 1.53 16 24 O -0.54 -3.96 17.97 4.94 0.09 -3.87 16 25 N -0.63 0.33 5.25 -12.27 -0.06 0.26 16 26 C -0.10 0.36 4.67 -26.70 -0.12 0.23 16 27 C -0.13 0.58 5.40 -26.70 -0.14 0.43 16 28 N -0.53 0.99 5.99 -5.70 -0.03 0.96 16 29 H 0.09 -0.48 7.13 -51.93 -0.37 -0.85 16 30 H 0.10 -0.64 5.17 -51.93 -0.27 -0.91 16 31 H 0.09 -0.63 8.14 -51.93 -0.42 -1.05 16 32 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 33 H 0.38 -0.92 8.74 45.56 0.40 -0.52 16 34 H -0.26 -0.69 7.11 56.52 0.40 -0.29 16 35 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 36 H 0.06 0.25 8.14 -51.93 -0.42 -0.18 16 37 H 0.08 0.36 5.61 -51.92 -0.29 0.07 16 38 H 0.07 0.40 6.49 -51.93 -0.34 0.07 16 39 H 0.39 -1.93 7.73 -40.82 -0.32 -2.24 16 40 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 41 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 42 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 43 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 44 H 0.17 -0.54 8.06 -52.49 -0.42 -0.96 16 45 H 0.16 0.05 8.06 -52.49 -0.42 -0.37 16 46 H 0.42 -1.13 8.78 -40.82 -0.36 -1.49 16 47 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 48 H 0.09 -0.22 7.76 -51.93 -0.40 -0.62 16 49 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 50 H 0.07 -0.40 8.14 -51.93 -0.42 -0.82 16 51 H 0.42 -2.31 8.19 -40.82 -0.33 -2.64 16 LS Contribution 402.92 15.07 6.07 6.07 Total: 0.00 -13.67 402.92 -10.90 -24.58 By element: Atomic # 1 Polarization: -11.02 SS G_CDS: -7.36 Total: -18.38 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: -4.40 Total: -1.66 kcal Atomic # 7 Polarization: 2.91 SS G_CDS: -0.48 Total: 2.44 kcal Atomic # 8 Polarization: -7.62 SS G_CDS: -0.19 Total: -7.81 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -4.55 Total: -5.24 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -13.67 -10.90 -24.58 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_12297754.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.129 kcal (2) G-P(sol) polarization free energy of solvation -13.671 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.800 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.575 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds