Wall clock time and date at job start Sun Mar 7 2021 03:18:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86300 * 109.47338 * 2 1 4 4 C 1.50697 * 109.47471 * 240.00136 * 2 1 3 5 5 C 1.38415 * 119.89527 * 119.97548 * 4 2 1 6 6 C 1.38247 * 120.34267 * 179.97438 * 5 4 2 7 7 C 1.38285 * 120.11452 * 359.76531 * 6 5 4 8 8 F 1.35095 * 120.11264 * 180.25326 * 7 6 5 9 9 C 1.39863 * 119.77905 * 0.53329 * 7 6 5 10 10 C 1.47696 * 120.16689 * 179.72281 * 9 7 6 11 11 O 1.21567 * 119.99995 * 359.72195 * 10 9 7 12 12 N 1.34777 * 120.00217 * 179.72645 * 10 9 7 13 13 C 1.46496 * 120.00336 * 180.02562 * 12 10 9 14 14 H 1.09000 * 109.46684 * 324.99535 * 13 12 10 15 15 C 1.53002 * 109.47428 * 84.99288 * 13 12 10 16 16 C 1.52996 * 109.46972 * 180.02562 * 15 13 12 17 17 C 1.52997 * 109.47165 * 300.00293 * 16 15 13 18 18 H 1.09000 * 109.47140 * 299.99954 * 17 16 15 19 19 C 1.50706 * 109.46909 * 180.02562 * 17 16 15 20 20 N 1.30637 * 119.25380 * 264.99571 * 19 17 16 21 21 C 1.33524 * 121.51009 * 179.97438 * 20 19 17 22 22 C 1.36202 * 119.90228 * 0.02562 * 21 20 19 23 23 C 1.41019 * 118.59729 * 359.97438 * 22 21 20 24 24 O 1.21985 * 120.71040 * 179.97438 * 23 22 21 25 25 N 1.34746 * 119.25573 * 84.73105 * 19 17 16 26 26 C 1.52999 * 109.47592 * 60.00300 * 17 16 15 27 27 C 1.52997 * 109.47079 * 204.99808 * 13 12 10 28 28 C 1.37904 * 119.88944 * 299.99905 * 4 2 1 29 29 H 0.96700 * 114.00194 * 59.99764 * 1 2 3 30 30 H 1.08999 * 109.47351 * 119.99766 * 2 1 3 31 31 H 1.48507 * 109.99981 * 59.99603 * 3 2 1 32 32 H 1.48499 * 110.00625 * 181.31979 * 3 2 1 33 33 H 1.08002 * 119.82718 * 0.02562 * 5 4 2 34 34 H 1.07997 * 119.94582 * 180.02562 * 6 5 4 35 35 H 0.97005 * 119.99682 * 359.97438 * 12 10 9 36 36 H 1.08992 * 109.46974 * 300.00496 * 15 13 12 37 37 H 1.08996 * 109.46550 * 60.00602 * 15 13 12 38 38 H 1.09000 * 109.47054 * 60.00300 * 16 15 13 39 39 H 1.09001 * 109.46997 * 180.02562 * 16 15 13 40 40 H 1.07995 * 120.04518 * 180.02562 * 21 20 19 41 41 H 1.07997 * 120.70063 * 179.97438 * 22 21 20 42 42 H 0.97005 * 120.03949 * 0.02562 * 25 19 17 43 43 H 1.08993 * 109.47839 * 180.02562 * 26 17 16 44 44 H 1.09000 * 109.47160 * 59.99666 * 26 17 16 45 45 H 1.09001 * 109.46922 * 59.99748 * 27 13 12 46 46 H 1.09000 * 109.47140 * 299.99448 * 27 13 12 47 47 H 1.08004 * 120.05634 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2304 5 6 2.7266 -0.0354 -2.1403 6 6 3.1930 -0.6782 -3.2719 7 6 2.8710 -2.0036 -3.4994 8 9 3.3310 -2.6332 -4.6026 9 6 2.0626 -2.6886 -2.5864 10 6 1.7083 -4.1026 -2.8240 11 8 2.1153 -4.6726 -3.8176 12 7 0.9336 -4.7611 -1.9393 13 6 0.5826 -6.1638 -2.1746 14 1 0.4565 -6.3322 -3.2441 15 6 1.6998 -7.0650 -1.6446 16 6 1.3334 -8.5298 -1.8911 17 6 0.0265 -8.8576 -1.1662 18 1 0.1523 -8.6895 -0.0966 19 6 -0.3339 -10.3007 -1.4084 20 7 -1.1562 -10.5991 -2.3787 21 6 -1.5058 -11.8624 -2.6335 22 6 -1.0019 -12.8731 -1.8722 23 6 -0.1143 -12.5512 -0.8248 24 8 0.3596 -13.4259 -0.1188 25 7 0.2033 -11.2545 -0.6227 26 6 -1.0906 -7.9565 -1.6961 27 6 -0.7241 -6.4912 -1.4493 28 6 1.5969 -2.0307 -1.4464 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5138 0.8900 31 1 1.5614 2.4679 1.2085 32 1 3.5346 1.7704 -0.0321 33 1 2.9847 0.9985 -1.9649 34 1 3.8134 -0.1455 -3.9774 35 1 0.6090 -4.3064 -1.1462 36 1 2.6306 -6.8317 -2.1614 37 1 1.8257 -6.8965 -0.5752 38 1 1.2076 -8.6979 -2.9607 39 1 2.1291 -9.1719 -1.5131 40 1 -2.1871 -12.0822 -3.4420 41 1 -1.2762 -13.8994 -2.0667 42 1 0.8144 -11.0095 0.0897 43 1 -2.0215 -8.1897 -1.1794 44 1 -1.2164 -8.1246 -2.7657 45 1 -1.5199 -5.8491 -1.8269 46 1 -0.5981 -6.3228 -0.3798 47 1 0.9762 -2.5549 -0.7348 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_12335834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:18:52 Heat of formation + Delta-G solvation = -81.355442 kcal Electronic energy + Delta-G solvation = -33339.541768 eV Core-core repulsion = 28596.391331 eV Total energy + Delta-G solvation = -4743.150438 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.147 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -49.89186 -42.86487 -41.49783 -40.41304 -39.44024 -38.38472 -37.62486 -35.91215 -35.19039 -33.26409 -32.45671 -32.17977 -31.97651 -30.09331 -26.79118 -26.23978 -25.53728 -25.02628 -23.95470 -23.45793 -22.44268 -21.60174 -21.02021 -19.76253 -19.36384 -19.05877 -18.40248 -18.31182 -17.86220 -17.59334 -17.01687 -16.88993 -16.85218 -16.40243 -16.20214 -15.96087 -15.87181 -15.74887 -15.58458 -15.40634 -15.23796 -14.91812 -14.56251 -14.44816 -14.39095 -14.10445 -14.05085 -13.78695 -13.60415 -13.40579 -13.23361 -12.93991 -12.64976 -12.51306 -12.36355 -12.31616 -12.05760 -11.98406 -11.80924 -11.50872 -11.21614 -11.11821 -11.04301 -10.64971 -10.46988 -10.16858 -9.88260 -9.56411 -5.21490 -0.56038 -0.47053 -0.15363 0.78643 1.07825 1.44763 1.55697 1.62020 1.81146 1.90704 2.43828 2.54828 2.66753 2.97258 3.17130 3.23442 3.31438 3.36666 3.41743 3.50172 3.50598 3.60338 3.75926 3.82272 3.94486 3.95451 3.98810 4.10672 4.15185 4.23182 4.23213 4.26270 4.39321 4.41393 4.51143 4.57621 4.60703 4.70151 4.79192 4.81067 4.83161 4.86040 4.91989 4.97721 4.99833 5.08459 5.19748 5.34711 5.42081 5.43296 5.48935 6.32100 6.34809 6.69592 6.79764 7.08612 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.066 4.066 3 Si 0.688 3.312 4 C -0.141 4.141 5 C -0.061 4.061 6 C -0.157 4.157 7 C 0.167 3.833 8 F -0.111 7.111 9 C -0.175 4.175 10 C 0.560 3.440 11 O -0.518 6.518 12 N -0.722 5.722 13 C 0.144 3.856 14 H 0.096 0.904 15 C -0.127 4.127 16 C -0.108 4.108 17 C -0.046 4.046 18 H 0.101 0.899 19 C 0.403 3.597 20 N -0.532 5.532 21 C 0.156 3.844 22 C -0.293 4.293 23 C 0.520 3.480 24 O -0.537 6.537 25 N -0.627 5.627 26 C -0.095 4.095 27 C -0.128 4.128 28 C -0.031 4.031 29 H 0.381 0.619 30 H 0.118 0.882 31 H -0.252 1.252 32 H -0.255 1.255 33 H 0.142 0.858 34 H 0.150 0.850 35 H 0.400 0.600 36 H 0.077 0.923 37 H 0.069 0.931 38 H 0.081 0.919 39 H 0.071 0.929 40 H 0.171 0.829 41 H 0.157 0.843 42 H 0.417 0.583 43 H 0.076 0.924 44 H 0.090 0.910 45 H 0.079 0.921 46 H 0.071 0.929 47 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.622 8.157 1.096 8.638 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.177 4.177 3 Si 0.589 3.411 4 C -0.141 4.141 5 C -0.078 4.078 6 C -0.175 4.175 7 C 0.146 3.854 8 F -0.089 7.089 9 C -0.179 4.179 10 C 0.347 3.653 11 O -0.394 6.394 12 N -0.374 5.374 13 C 0.040 3.960 14 H 0.114 0.886 15 C -0.166 4.166 16 C -0.147 4.147 17 C -0.067 4.067 18 H 0.119 0.881 19 C 0.138 3.862 20 N -0.256 5.256 21 C 0.018 3.982 22 C -0.318 4.318 23 C 0.318 3.682 24 O -0.415 6.415 25 N -0.265 5.265 26 C -0.134 4.134 27 C -0.166 4.166 28 C -0.050 4.050 29 H 0.229 0.771 30 H 0.135 0.865 31 H -0.176 1.176 32 H -0.180 1.180 33 H 0.159 0.841 34 H 0.168 0.832 35 H 0.236 0.764 36 H 0.095 0.905 37 H 0.088 0.912 38 H 0.099 0.901 39 H 0.090 0.910 40 H 0.188 0.812 41 H 0.175 0.825 42 H 0.256 0.744 43 H 0.095 0.905 44 H 0.109 0.891 45 H 0.098 0.902 46 H 0.090 0.910 47 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -1.962 7.777 1.070 8.091 hybrid contribution 0.630 -1.165 1.127 1.739 sum -1.333 6.612 2.197 7.094 Atomic orbital electron populations 1.86513 1.16776 1.81647 1.49462 1.25029 0.85474 1.10219 0.96966 0.94728 0.81049 0.77588 0.87718 1.20335 1.00634 0.95004 0.98166 1.21104 0.94666 0.99693 0.92365 1.21180 1.03463 0.92962 0.99925 1.17758 0.93622 0.90534 0.83490 1.91632 1.85836 1.81991 1.49392 1.20085 1.04520 0.95347 0.97981 1.17969 0.78734 0.85532 0.83114 1.90878 1.52484 1.68482 1.27561 1.45939 1.52725 1.12895 1.25876 1.21077 0.93812 0.79330 1.01810 0.88645 1.21910 0.99397 0.93421 1.01886 1.21562 0.94528 0.96800 1.01859 1.20562 0.98001 0.85817 1.02296 0.88094 1.23195 0.86211 0.92105 0.84683 1.68293 1.17468 1.21664 1.18161 1.22765 0.93026 0.86799 0.95591 1.22974 1.05281 1.03179 1.00324 1.17359 0.83397 0.81040 0.86390 1.91030 1.55515 1.45518 1.49452 1.44771 1.41242 1.08909 1.31622 1.21374 0.96443 0.91656 1.03886 1.21871 0.96619 0.97192 1.00952 1.21017 0.95776 0.93641 0.94550 0.77098 0.86461 1.17639 1.18026 0.84125 0.83249 0.76441 0.90464 0.91224 0.90071 0.91044 0.81218 0.82519 0.74382 0.90523 0.89138 0.90221 0.91049 0.84311 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.59 12.76 -35.23 -0.45 1.14 16 2 C -0.07 0.22 2.82 36.00 0.10 0.32 16 3 Si 0.69 -2.43 29.78 -169.99 -5.06 -7.49 16 4 C -0.14 0.40 5.39 -104.68 -0.56 -0.16 16 5 C -0.06 0.19 8.66 -39.51 -0.34 -0.16 16 6 C -0.16 0.25 10.01 -39.56 -0.40 -0.14 16 7 C 0.17 0.19 7.29 -38.96 -0.28 -0.09 16 8 F -0.11 -0.45 15.55 2.25 0.04 -0.41 16 9 C -0.18 -0.04 5.88 -104.91 -0.62 -0.66 16 10 C 0.56 0.88 7.73 -12.40 -0.10 0.79 16 11 O -0.52 -2.94 15.00 5.31 0.08 -2.86 16 12 N -0.72 1.38 5.03 -54.80 -0.28 1.10 16 13 C 0.14 -0.32 2.45 -67.93 -0.17 -0.49 16 14 H 0.10 0.00 7.58 -51.93 -0.39 -0.40 16 15 C -0.13 0.32 5.49 -26.73 -0.15 0.18 16 16 C -0.11 0.34 5.19 -26.73 -0.14 0.20 16 17 C -0.05 0.18 2.48 -91.77 -0.23 -0.05 16 18 H 0.10 -0.57 8.14 -51.93 -0.42 -1.00 16 19 C 0.40 -0.56 6.73 -155.57 -1.05 -1.61 16 20 N -0.53 0.10 9.12 -10.63 -0.10 0.00 16 21 C 0.16 -0.06 11.20 -17.55 -0.20 -0.26 16 22 C -0.29 -0.38 10.07 -39.26 -0.40 -0.77 16 23 C 0.52 1.67 7.75 -15.10 -0.12 1.55 16 24 O -0.54 -3.99 17.97 4.93 0.09 -3.90 16 25 N -0.63 0.30 5.25 -12.27 -0.06 0.23 16 26 C -0.10 0.35 4.67 -26.70 -0.12 0.22 16 27 C -0.13 0.55 5.39 -26.70 -0.14 0.41 16 28 C -0.03 0.07 9.09 -39.19 -0.36 -0.28 16 29 H 0.38 -2.49 8.70 45.56 0.40 -2.09 16 30 H 0.12 -0.37 7.96 -51.93 -0.41 -0.79 16 31 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 32 H -0.26 0.31 7.11 56.52 0.40 0.71 16 33 H 0.14 -0.73 4.86 -52.49 -0.25 -0.99 16 34 H 0.15 -0.51 8.06 -52.49 -0.42 -0.93 16 35 H 0.40 -1.77 6.64 -40.82 -0.27 -2.04 16 36 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 38 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 40 H 0.17 -0.53 8.06 -52.49 -0.42 -0.95 16 41 H 0.16 0.06 8.06 -52.49 -0.42 -0.36 16 42 H 0.42 -1.12 8.78 -40.82 -0.36 -1.47 16 43 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 44 H 0.09 -0.21 7.76 -51.93 -0.40 -0.62 16 45 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 46 H 0.07 -0.39 8.14 -51.93 -0.42 -0.81 16 47 H 0.14 -0.60 6.40 -52.48 -0.34 -0.93 16 LS Contribution 390.95 15.07 5.89 5.89 Total: 0.00 -12.39 390.95 -10.99 -23.38 By element: Atomic # 1 Polarization: -10.19 SS G_CDS: -5.88 Total: -16.08 kcal Atomic # 6 Polarization: 4.24 SS G_CDS: -5.26 Total: -1.01 kcal Atomic # 7 Polarization: 1.78 SS G_CDS: -0.44 Total: 1.34 kcal Atomic # 8 Polarization: -5.34 SS G_CDS: -0.28 Total: -5.62 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -2.43 SS G_CDS: -5.06 Total: -7.49 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -12.39 -10.99 -23.38 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_12335834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.971 kcal (2) G-P(sol) polarization free energy of solvation -12.392 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.363 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.993 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.384 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.355 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds