Wall clock time and date at job start Sun Mar 7 2021 03:18:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86300 * 109.47338 * 2 1 4 4 C 1.50697 * 109.47471 * 240.00136 * 2 1 3 5 5 C 1.38415 * 119.89527 * 119.97548 * 4 2 1 6 6 C 1.38247 * 120.34267 * 179.97438 * 5 4 2 7 7 C 1.38285 * 120.11452 * 359.76531 * 6 5 4 8 8 F 1.35095 * 120.11264 * 180.25326 * 7 6 5 9 9 C 1.39863 * 119.77905 * 0.53329 * 7 6 5 10 10 C 1.47696 * 120.16689 * 179.72281 * 9 7 6 11 11 O 1.21567 * 119.99995 * 359.72195 * 10 9 7 12 12 N 1.34777 * 120.00217 * 179.72645 * 10 9 7 13 13 C 1.46496 * 120.00336 * 180.02562 * 12 10 9 14 14 H 1.09000 * 109.46684 * 324.99535 * 13 12 10 15 15 C 1.53002 * 109.47428 * 84.99288 * 13 12 10 16 16 C 1.52996 * 109.46972 * 180.02562 * 15 13 12 17 17 C 1.52997 * 109.47165 * 300.00293 * 16 15 13 18 18 H 1.09000 * 109.47140 * 299.99954 * 17 16 15 19 19 C 1.50706 * 109.46909 * 180.02562 * 17 16 15 20 20 N 1.30637 * 119.25380 * 264.99571 * 19 17 16 21 21 C 1.33524 * 121.51009 * 179.97438 * 20 19 17 22 22 C 1.36202 * 119.90228 * 0.02562 * 21 20 19 23 23 C 1.41019 * 118.59729 * 359.97438 * 22 21 20 24 24 O 1.21985 * 120.71040 * 179.97438 * 23 22 21 25 25 N 1.34746 * 119.25573 * 84.73105 * 19 17 16 26 26 C 1.52999 * 109.47592 * 60.00300 * 17 16 15 27 27 C 1.52997 * 109.47079 * 204.99808 * 13 12 10 28 28 C 1.37904 * 119.88944 * 299.99905 * 4 2 1 29 29 H 0.96700 * 114.00194 * 59.99764 * 1 2 3 30 30 H 1.08999 * 109.47351 * 119.99766 * 2 1 3 31 31 H 1.48507 * 109.99981 * 59.99603 * 3 2 1 32 32 H 1.48499 * 110.00625 * 181.31979 * 3 2 1 33 33 H 1.08002 * 119.82718 * 0.02562 * 5 4 2 34 34 H 1.07997 * 119.94582 * 180.02562 * 6 5 4 35 35 H 0.97005 * 119.99682 * 359.97438 * 12 10 9 36 36 H 1.08992 * 109.46974 * 300.00496 * 15 13 12 37 37 H 1.08996 * 109.46550 * 60.00602 * 15 13 12 38 38 H 1.09000 * 109.47054 * 60.00300 * 16 15 13 39 39 H 1.09001 * 109.46997 * 180.02562 * 16 15 13 40 40 H 1.07995 * 120.04518 * 180.02562 * 21 20 19 41 41 H 1.07997 * 120.70063 * 179.97438 * 22 21 20 42 42 H 0.97005 * 120.03949 * 0.02562 * 25 19 17 43 43 H 1.08993 * 109.47839 * 180.02562 * 26 17 16 44 44 H 1.09000 * 109.47160 * 59.99666 * 26 17 16 45 45 H 1.09001 * 109.46922 * 59.99748 * 27 13 12 46 46 H 1.09000 * 109.47140 * 299.99448 * 27 13 12 47 47 H 1.08004 * 120.05634 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2304 5 6 2.7266 -0.0354 -2.1403 6 6 3.1930 -0.6782 -3.2719 7 6 2.8710 -2.0036 -3.4994 8 9 3.3310 -2.6332 -4.6026 9 6 2.0626 -2.6886 -2.5864 10 6 1.7083 -4.1026 -2.8240 11 8 2.1153 -4.6726 -3.8176 12 7 0.9336 -4.7611 -1.9393 13 6 0.5826 -6.1638 -2.1746 14 1 0.4565 -6.3322 -3.2441 15 6 1.6998 -7.0650 -1.6446 16 6 1.3334 -8.5298 -1.8911 17 6 0.0265 -8.8576 -1.1662 18 1 0.1523 -8.6895 -0.0966 19 6 -0.3339 -10.3007 -1.4084 20 7 -1.1562 -10.5991 -2.3787 21 6 -1.5058 -11.8624 -2.6335 22 6 -1.0019 -12.8731 -1.8722 23 6 -0.1143 -12.5512 -0.8248 24 8 0.3596 -13.4259 -0.1188 25 7 0.2033 -11.2545 -0.6227 26 6 -1.0906 -7.9565 -1.6961 27 6 -0.7241 -6.4912 -1.4493 28 6 1.5969 -2.0307 -1.4464 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5138 0.8900 31 1 1.5614 2.4679 1.2085 32 1 3.5346 1.7704 -0.0321 33 1 2.9847 0.9985 -1.9649 34 1 3.8134 -0.1455 -3.9774 35 1 0.6090 -4.3064 -1.1462 36 1 2.6306 -6.8317 -2.1614 37 1 1.8257 -6.8965 -0.5752 38 1 1.2076 -8.6979 -2.9607 39 1 2.1291 -9.1719 -1.5131 40 1 -2.1871 -12.0822 -3.4420 41 1 -1.2762 -13.8994 -2.0667 42 1 0.8144 -11.0095 0.0897 43 1 -2.0215 -8.1897 -1.1794 44 1 -1.2164 -8.1246 -2.7657 45 1 -1.5199 -5.8491 -1.8269 46 1 -0.5981 -6.3228 -0.3798 47 1 0.9762 -2.5549 -0.7348 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_12335834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:18:51 Heat of formation + Delta-G solvation = -85.031557 kcal Electronic energy + Delta-G solvation = -33339.701177 eV Core-core repulsion = 28596.391331 eV Total energy + Delta-G solvation = -4743.309846 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.147 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -49.99751 -42.90701 -41.46493 -40.27346 -39.47418 -38.47716 -37.40024 -35.91142 -35.22671 -33.19984 -32.32492 -32.08712 -31.78437 -30.00813 -26.59911 -26.18274 -25.55340 -24.96300 -23.74572 -23.35071 -22.32245 -21.56221 -20.85308 -19.78309 -19.31078 -19.06866 -18.27289 -18.25447 -17.83017 -17.49108 -17.08753 -16.91288 -16.85213 -16.30164 -16.05286 -15.92637 -15.78408 -15.64895 -15.62755 -15.27051 -15.11939 -14.76631 -14.50282 -14.44587 -14.35233 -14.08193 -13.98113 -13.62367 -13.46705 -13.22580 -13.11915 -12.84745 -12.50353 -12.36241 -12.14345 -12.13175 -12.04427 -11.83641 -11.61762 -11.40530 -11.35676 -11.12091 -11.06826 -10.45541 -10.37855 -10.07963 -9.78625 -9.67666 -4.94707 -0.47216 -0.46338 -0.00902 0.67072 1.33686 1.54968 1.63393 1.68811 1.97804 2.03921 2.49398 2.50938 2.76877 3.07335 3.37122 3.41853 3.49178 3.56744 3.60699 3.64678 3.69618 3.70351 3.96454 4.03120 4.11906 4.14572 4.17465 4.28069 4.33910 4.38602 4.47345 4.48927 4.50415 4.60353 4.63714 4.78589 4.81140 4.85723 4.88087 4.96853 5.00441 5.05765 5.14824 5.16392 5.21331 5.29850 5.34476 5.38452 5.46262 5.54326 5.61891 6.41770 6.65837 6.70224 6.82052 7.10640 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.063 4.063 3 Si 0.765 3.235 4 C -0.134 4.134 5 C -0.053 4.053 6 C -0.154 4.154 7 C 0.131 3.869 8 F -0.138 7.138 9 C -0.188 4.188 10 C 0.554 3.446 11 O -0.571 6.571 12 N -0.704 5.704 13 C 0.142 3.858 14 H 0.066 0.934 15 C -0.121 4.121 16 C -0.103 4.103 17 C -0.039 4.039 18 H 0.133 0.867 19 C 0.409 3.591 20 N -0.544 5.544 21 C 0.173 3.827 22 C -0.318 4.318 23 C 0.509 3.491 24 O -0.593 6.593 25 N -0.615 5.615 26 C -0.092 4.092 27 C -0.117 4.117 28 C -0.023 4.023 29 H 0.397 0.603 30 H 0.121 0.879 31 H -0.303 1.303 32 H -0.283 1.283 33 H 0.165 0.835 34 H 0.164 0.836 35 H 0.415 0.585 36 H 0.048 0.952 37 H 0.091 0.909 38 H 0.062 0.938 39 H 0.077 0.923 40 H 0.198 0.802 41 H 0.159 0.841 42 H 0.429 0.571 43 H 0.084 0.916 44 H 0.074 0.926 45 H 0.082 0.918 46 H 0.096 0.904 47 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.793 10.018 2.580 11.019 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.173 4.173 3 Si 0.672 3.328 4 C -0.135 4.135 5 C -0.071 4.071 6 C -0.172 4.172 7 C 0.111 3.889 8 F -0.116 7.116 9 C -0.192 4.192 10 C 0.342 3.658 11 O -0.451 6.451 12 N -0.356 5.356 13 C 0.038 3.962 14 H 0.084 0.916 15 C -0.159 4.159 16 C -0.143 4.143 17 C -0.060 4.060 18 H 0.151 0.849 19 C 0.145 3.855 20 N -0.267 5.267 21 C 0.034 3.966 22 C -0.343 4.343 23 C 0.310 3.690 24 O -0.476 6.476 25 N -0.252 5.252 26 C -0.131 4.131 27 C -0.155 4.155 28 C -0.041 4.041 29 H 0.248 0.752 30 H 0.138 0.862 31 H -0.231 1.231 32 H -0.210 1.210 33 H 0.182 0.818 34 H 0.182 0.818 35 H 0.254 0.746 36 H 0.067 0.933 37 H 0.110 0.890 38 H 0.081 0.919 39 H 0.096 0.904 40 H 0.215 0.785 41 H 0.176 0.824 42 H 0.269 0.731 43 H 0.102 0.898 44 H 0.092 0.908 45 H 0.101 0.899 46 H 0.115 0.885 47 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -3.164 9.683 2.565 10.505 hybrid contribution 0.958 -1.577 0.687 1.969 sum -2.206 8.106 3.252 9.009 Atomic orbital electron populations 1.86488 1.16633 1.82006 1.50701 1.25039 0.85624 1.10040 0.96623 0.93831 0.78058 0.75488 0.85391 1.20474 1.00033 0.94752 0.98198 1.21373 0.93667 1.00626 0.91409 1.21375 1.03309 0.91879 1.00675 1.18232 0.95308 0.91855 0.83541 1.91557 1.86477 1.82700 1.50880 1.20095 1.05311 0.94794 0.98989 1.18302 0.78539 0.86171 0.82802 1.90848 1.54754 1.69668 1.29850 1.45832 1.51282 1.12953 1.25566 1.21107 0.95272 0.79167 1.00660 0.91559 1.21828 0.97884 0.93503 1.02726 1.21487 0.95231 0.96618 1.00929 1.20674 0.97305 0.83947 1.04029 0.84925 1.23706 0.85231 0.92794 0.83772 1.68389 1.18031 1.21738 1.18580 1.23182 0.92068 0.86195 0.95202 1.23003 1.06352 1.03960 1.00969 1.17661 0.83426 0.81556 0.86385 1.90989 1.57887 1.47194 1.51556 1.44629 1.40836 1.08034 1.31728 1.21336 0.96686 0.92023 1.03019 1.21806 0.95036 0.96614 1.02039 1.21202 0.95334 0.93882 0.93732 0.75222 0.86204 1.23102 1.20952 0.81777 0.81799 0.74623 0.93325 0.88997 0.91933 0.90425 0.78508 0.82360 0.73085 0.89784 0.90768 0.89903 0.88531 0.82093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 4.56 12.76 -148.98 -1.90 2.66 16 2 C -0.06 0.55 2.82 71.24 0.20 0.75 16 3 Si 0.77 -6.41 29.78 68.60 2.04 -4.37 16 4 C -0.13 1.00 5.39 -19.90 -0.11 0.90 16 5 C -0.05 0.41 8.66 22.31 0.19 0.60 16 6 C -0.15 0.52 10.01 22.28 0.22 0.74 16 7 C 0.13 0.48 7.29 22.67 0.17 0.65 16 8 F -0.14 -1.52 15.55 44.97 0.70 -0.82 16 9 C -0.19 -0.20 5.88 -20.05 -0.12 -0.32 16 10 C 0.55 2.53 7.73 86.74 0.67 3.20 16 11 O -0.57 -8.25 15.00 -3.93 -0.06 -8.31 16 12 N -0.70 2.79 5.03 -445.56 -2.24 0.55 16 13 C 0.14 -0.62 2.45 44.99 0.11 -0.51 16 14 H 0.07 0.14 7.58 -2.39 -0.02 0.12 16 15 C -0.12 0.61 5.49 30.59 0.17 0.78 16 16 C -0.10 0.65 5.19 30.59 0.16 0.81 16 17 C -0.04 0.36 2.48 -11.54 -0.03 0.33 16 18 H 0.13 -1.95 8.14 -2.39 -0.02 -1.97 16 19 C 0.41 -1.41 6.73 138.18 0.93 -0.48 16 20 N -0.54 0.47 9.12 -187.55 -1.71 -1.24 16 21 C 0.17 -0.19 11.20 83.96 0.94 0.75 16 22 C -0.32 -1.11 10.07 22.48 0.23 -0.88 16 23 C 0.51 3.90 7.75 84.88 0.66 4.55 16 24 O -0.59 -10.13 17.97 -5.27 -0.09 -10.22 16 25 N -0.61 0.59 5.25 -310.69 -1.63 -1.04 16 26 C -0.09 0.80 4.67 30.61 0.14 0.94 16 27 C -0.12 1.21 5.39 30.61 0.17 1.38 16 28 C -0.02 0.14 9.09 22.52 0.20 0.34 16 29 H 0.40 -6.19 8.70 -74.06 -0.64 -6.84 16 30 H 0.12 -1.05 7.96 -2.39 -0.02 -1.07 16 31 H -0.30 -0.14 7.11 99.48 0.71 0.57 16 32 H -0.28 1.03 7.11 99.48 0.71 1.74 16 33 H 0.17 -2.09 4.86 -2.91 -0.01 -2.10 16 34 H 0.16 -1.15 8.06 -2.91 -0.02 -1.18 16 35 H 0.42 -4.39 6.64 -92.70 -0.62 -5.01 16 36 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 37 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 38 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 39 H 0.08 -0.56 8.14 -2.39 -0.02 -0.57 16 40 H 0.20 -1.45 8.06 -2.91 -0.02 -1.47 16 41 H 0.16 0.36 8.06 -2.91 -0.02 0.33 16 42 H 0.43 -2.44 8.78 -92.70 -0.81 -3.26 16 43 H 0.08 -0.78 8.14 -2.39 -0.02 -0.80 16 44 H 0.07 -0.35 7.76 -2.39 -0.02 -0.37 16 45 H 0.08 -0.84 8.14 -2.39 -0.02 -0.86 16 46 H 0.10 -1.41 8.14 -2.39 -0.02 -1.43 16 47 H 0.16 -1.79 6.40 -2.91 -0.02 -1.80 16 Total: 0.00 -34.23 390.95 -0.96 -35.19 By element: Atomic # 1 Polarization: -25.96 SS G_CDS: -0.97 Total: -26.93 kcal Atomic # 6 Polarization: 9.62 SS G_CDS: 4.90 Total: 14.52 kcal Atomic # 7 Polarization: 3.86 SS G_CDS: -5.58 Total: -1.72 kcal Atomic # 8 Polarization: -13.82 SS G_CDS: -2.05 Total: -15.87 kcal Atomic # 9 Polarization: -1.52 SS G_CDS: 0.70 Total: -0.82 kcal Atomic # 14 Polarization: -6.41 SS G_CDS: 2.04 Total: -4.37 kcal Total: -34.23 -0.96 -35.19 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_12335834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.840 kcal (2) G-P(sol) polarization free energy of solvation -34.228 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.068 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.963 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.192 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.032 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds