Wall clock time and date at job start Sun Mar 7 2021 03:19:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.46886 * 2 1 4 4 C 1.50704 * 109.46944 * 240.00357 * 2 1 3 5 5 C 1.34460 * 126.48090 * 104.97539 * 4 2 1 6 6 N 1.36565 * 109.97920 * 179.97438 * 5 4 2 7 7 C 1.37825 * 109.86343 * 359.97438 * 6 5 4 8 8 C 1.38647 * 133.37918 * 180.02562 * 7 6 5 9 9 C 1.39322 * 119.66627 * 179.97438 * 8 7 6 10 10 C 1.47577 * 119.83189 * 179.97438 * 9 8 7 11 11 O 1.21592 * 120.00194 * 0.02562 * 10 9 8 12 12 N 1.34776 * 119.99796 * 180.02562 * 10 9 8 13 13 C 1.46504 * 119.99541 * 180.02562 * 12 10 9 14 14 H 1.08996 * 109.47440 * 35.00056 * 13 12 10 15 15 C 1.52999 * 109.46949 * 155.00129 * 13 12 10 16 16 C 1.52996 * 109.47437 * 179.97438 * 15 13 12 17 17 C 1.53008 * 109.47186 * 300.00158 * 16 15 13 18 18 H 1.08996 * 109.46957 * 299.99766 * 17 16 15 19 19 C 1.50701 * 109.47120 * 179.97438 * 17 16 15 20 20 N 1.30634 * 119.25482 * 335.02087 * 19 17 16 21 21 C 1.33526 * 121.50817 * 179.97438 * 20 19 17 22 22 C 1.36195 * 119.90299 * 0.02562 * 21 20 19 23 23 C 1.41025 * 118.59791 * 359.97438 * 22 21 20 24 24 O 1.21982 * 120.70775 * 180.02562 * 23 22 21 25 25 N 1.34746 * 119.25380 * 154.99993 * 19 17 16 26 26 C 1.52999 * 109.47062 * 59.99612 * 17 16 15 27 27 C 1.52998 * 109.47007 * 274.99729 * 13 12 10 28 28 C 1.40202 * 120.33608 * 0.26915 * 9 8 7 29 29 C 1.36234 * 120.37388 * 359.48667 * 28 9 8 30 30 C 1.39874 * 119.96029 * 0.48865 * 29 28 9 31 31 H 0.96694 * 114.00597 * 60.00462 * 1 2 3 32 32 H 1.09002 * 109.47816 * 119.99944 * 2 1 3 33 33 H 1.48498 * 110.00348 * 60.00143 * 3 2 1 34 34 H 1.48504 * 110.00271 * 181.32273 * 3 2 1 35 35 H 1.07996 * 125.01042 * 359.97438 * 5 4 2 36 36 H 0.97003 * 125.06220 * 179.97438 * 6 5 4 37 37 H 1.08000 * 120.16597 * 0.02562 * 8 7 6 38 38 H 0.96998 * 120.00135 * 0.02562 * 12 10 9 39 39 H 1.09010 * 109.47243 * 59.99623 * 15 13 12 40 40 H 1.08999 * 109.47341 * 300.00280 * 15 13 12 41 41 H 1.08995 * 109.47496 * 180.02562 * 16 15 13 42 42 H 1.08996 * 109.46982 * 59.99909 * 16 15 13 43 43 H 1.07999 * 120.04371 * 180.02562 * 21 20 19 44 44 H 1.08003 * 120.69776 * 180.27226 * 22 21 20 45 45 H 0.97006 * 120.03713 * 359.97438 * 25 19 17 46 46 H 1.09005 * 109.46954 * 59.99669 * 26 17 16 47 47 H 1.08999 * 109.47341 * 179.97438 * 26 17 16 48 48 H 1.08997 * 109.47660 * 300.00030 * 27 13 12 49 49 H 1.09001 * 109.47154 * 60.00952 * 27 13 12 50 50 H 1.08000 * 119.80929 * 179.74359 * 28 9 8 51 51 H 1.08005 * 120.01508 * 180.25706 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.4611 -0.1361 -2.3248 6 7 2.8036 -1.0946 -3.2354 7 6 2.4962 -2.3431 -2.7391 8 6 2.6341 -3.6280 -3.2415 9 6 2.2179 -4.7157 -2.4769 10 6 2.3625 -6.0849 -3.0083 11 8 2.8442 -6.2615 -4.1106 12 7 1.9606 -7.1395 -2.2717 13 6 2.1046 -8.4987 -2.7990 14 1 3.0148 -8.5626 -3.3953 15 6 2.1855 -9.4907 -1.6370 16 6 2.3353 -10.9103 -2.1876 17 6 1.1268 -11.2479 -3.0632 18 1 0.2168 -11.1837 -2.4667 19 6 1.2746 -12.6459 -3.6060 20 7 2.4690 -13.1613 -3.7257 21 6 2.6521 -14.3957 -4.2007 22 6 1.5782 -15.1459 -4.5735 23 6 0.2887 -14.5897 -4.4444 24 8 -0.6999 -15.2277 -4.7662 25 7 0.1718 -13.3362 -3.9567 26 6 1.0459 -10.2559 -4.2252 27 6 0.8964 -8.8367 -3.6748 28 6 1.6568 -4.5158 -1.2077 29 6 1.5222 -3.2570 -0.7045 30 6 1.9358 -2.1548 -1.4599 31 1 -0.3934 0.4416 -0.7650 32 1 1.7924 -0.5138 0.8900 33 1 1.5614 2.4679 1.2085 34 1 3.5345 1.7704 -0.0322 35 1 2.5960 0.9264 -2.4633 36 1 3.2035 -0.9222 -4.1021 37 1 3.0627 -3.7849 -4.2203 38 1 1.5759 -6.9986 -1.3924 39 1 1.2752 -9.4268 -1.0406 40 1 3.0462 -9.2499 -1.0130 41 1 2.3925 -11.6170 -1.3598 42 1 3.2453 -10.9744 -2.7841 43 1 3.6502 -14.7985 -4.2893 44 1 1.7111 -16.1474 -4.9553 45 1 -0.7050 -12.9331 -3.8583 46 1 1.9560 -10.3200 -4.8217 47 1 0.1852 -10.4967 -4.8492 48 1 -0.0138 -8.7729 -3.0786 49 1 0.8388 -8.1300 -4.5027 50 1 1.3333 -5.3649 -0.6239 51 1 1.0930 -3.1100 0.2757 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_12335838.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:19:01 Heat of formation + Delta-G solvation = -6.387295 kcal Electronic energy + Delta-G solvation = -35288.348058 eV Core-core repulsion = 30540.486648 eV Total energy + Delta-G solvation = -4747.861410 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.168 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -42.85260 -42.50270 -41.11237 -39.65899 -38.45040 -37.86002 -37.45022 -35.87075 -35.12364 -33.27583 -32.62091 -32.02029 -30.98598 -30.73206 -29.71625 -26.58116 -26.02459 -25.42657 -24.44132 -23.92605 -23.62640 -22.63048 -21.44839 -21.00335 -20.78497 -19.74482 -19.41134 -19.08263 -18.37501 -17.90412 -17.72508 -17.20336 -16.98386 -16.94012 -16.36733 -16.12930 -16.01304 -15.70670 -15.61159 -15.56640 -15.35066 -15.26839 -15.07136 -14.81279 -14.74693 -14.50873 -14.34860 -14.08251 -14.03325 -13.98724 -13.56058 -13.33996 -13.16112 -12.67241 -12.60613 -12.46299 -12.33479 -12.32166 -12.25358 -12.03774 -11.93932 -11.76655 -11.46428 -11.19396 -11.10223 -10.88539 -10.77279 -10.37804 -10.10647 -9.55320 -9.37432 -8.83456 -5.12330 -0.45845 -0.27888 0.37658 0.79772 1.26468 1.34969 1.57185 1.60002 1.85316 1.95096 2.00415 2.18814 2.56057 2.68979 2.91992 3.26518 3.42799 3.52435 3.53258 3.56591 3.61656 3.71106 3.74081 3.80210 3.84141 3.98994 4.00729 4.08254 4.14881 4.19181 4.24664 4.29659 4.30347 4.40251 4.44455 4.49397 4.52597 4.54050 4.61377 4.71238 4.81351 4.86219 4.88579 4.95276 4.96228 5.02423 5.12585 5.21203 5.24648 5.39842 5.41564 5.43296 5.44369 5.51164 5.58903 5.96549 6.34013 6.47778 6.62644 6.70841 6.80869 7.22973 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.684 3.316 4 C -0.211 4.211 5 C 0.077 3.923 6 N -0.584 5.584 7 C 0.081 3.919 8 C -0.056 4.056 9 C -0.122 4.122 10 C 0.565 3.435 11 O -0.537 6.537 12 N -0.723 5.723 13 C 0.144 3.856 14 H 0.094 0.906 15 C -0.129 4.129 16 C -0.095 4.095 17 C -0.046 4.046 18 H 0.101 0.899 19 C 0.404 3.596 20 N -0.533 5.533 21 C 0.156 3.844 22 C -0.293 4.293 23 C 0.520 3.480 24 O -0.537 6.537 25 N -0.627 5.627 26 C -0.108 4.108 27 C -0.127 4.127 28 C -0.113 4.113 29 C -0.073 4.073 30 C -0.064 4.064 31 H 0.377 0.623 32 H 0.111 0.889 33 H -0.254 1.254 34 H -0.256 1.256 35 H 0.179 0.821 36 H 0.422 0.578 37 H 0.136 0.864 38 H 0.401 0.599 39 H 0.071 0.929 40 H 0.078 0.922 41 H 0.075 0.925 42 H 0.089 0.911 43 H 0.170 0.830 44 H 0.157 0.843 45 H 0.418 0.582 46 H 0.080 0.920 47 H 0.071 0.929 48 H 0.069 0.931 49 H 0.077 0.923 50 H 0.126 0.874 51 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.958 6.596 1.835 6.913 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.141 4.141 3 Si 0.585 3.415 4 C -0.219 4.219 5 C -0.052 4.052 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.078 4.078 9 C -0.127 4.127 10 C 0.353 3.647 11 O -0.414 6.414 12 N -0.375 5.375 13 C 0.039 3.961 14 H 0.112 0.888 15 C -0.167 4.167 16 C -0.134 4.134 17 C -0.067 4.067 18 H 0.119 0.881 19 C 0.138 3.862 20 N -0.256 5.256 21 C 0.018 3.982 22 C -0.318 4.318 23 C 0.318 3.682 24 O -0.415 6.415 25 N -0.265 5.265 26 C -0.148 4.148 27 C -0.166 4.166 28 C -0.133 4.133 29 C -0.092 4.092 30 C -0.069 4.069 31 H 0.224 0.776 32 H 0.129 0.871 33 H -0.179 1.179 34 H -0.181 1.181 35 H 0.196 0.804 36 H 0.260 0.740 37 H 0.154 0.846 38 H 0.237 0.763 39 H 0.090 0.910 40 H 0.097 0.903 41 H 0.094 0.906 42 H 0.108 0.892 43 H 0.188 0.812 44 H 0.175 0.825 45 H 0.256 0.744 46 H 0.099 0.901 47 H 0.089 0.911 48 H 0.088 0.912 49 H 0.095 0.905 50 H 0.144 0.856 51 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 2.219 6.532 1.832 7.138 hybrid contribution -0.928 -0.876 -0.071 1.278 sum 1.291 5.656 1.762 6.063 Atomic orbital electron populations 1.86503 1.17428 1.81756 1.49023 1.24328 0.84750 1.08853 0.96169 0.95274 0.80773 0.77375 0.88035 1.20738 1.10836 0.92150 0.98187 1.21754 0.99721 0.94350 0.89332 1.41725 1.54678 1.04021 1.18197 1.18079 1.03236 0.86317 0.94873 1.20081 0.99466 0.88082 1.00128 1.19436 1.05006 0.92383 0.95848 1.18149 0.77343 0.84567 0.84662 1.90798 1.44410 1.86154 1.20076 1.45952 1.64528 1.05922 1.21096 1.21046 0.99571 0.80233 0.95220 0.88790 1.21862 1.03308 0.94190 0.97311 1.21365 0.97489 0.95385 0.99126 1.20568 1.02146 0.86042 0.97930 0.88069 1.23208 0.82207 0.93843 0.86901 1.68295 1.19506 1.14578 1.23255 1.22762 1.00191 0.87948 0.87290 1.22974 0.91398 1.04833 1.12588 1.17358 0.91734 0.80299 0.78806 1.91029 1.40172 1.59412 1.50893 1.44771 1.11675 1.16437 1.53664 1.21557 1.03723 0.93356 0.96116 1.21902 0.98427 0.95924 1.00331 1.20680 1.00598 0.97303 0.94739 1.20205 0.98767 0.90530 0.99652 1.19175 1.01001 0.93069 0.93611 0.77576 0.87139 1.17871 1.18071 0.80439 0.73993 0.84627 0.76350 0.91050 0.90292 0.90590 0.89192 0.81242 0.82528 0.74368 0.90148 0.91079 0.91202 0.90457 0.85649 0.85247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.17 12.88 -35.23 -0.45 -0.28 16 2 C -0.03 0.03 3.06 36.01 0.11 0.14 16 3 Si 0.68 -1.59 30.75 -169.99 -5.23 -6.81 16 4 C -0.21 0.10 5.57 -102.73 -0.57 -0.47 16 5 C 0.08 -0.19 10.43 -16.78 -0.17 -0.37 16 6 N -0.58 1.10 6.07 -10.69 -0.06 1.04 16 7 C 0.08 0.06 7.26 -84.00 -0.61 -0.55 16 8 C -0.06 -0.08 9.61 -39.03 -0.37 -0.45 16 9 C -0.12 -0.14 5.87 -104.95 -0.62 -0.75 16 10 C 0.56 0.97 7.72 -12.45 -0.10 0.88 16 11 O -0.54 -2.80 15.97 5.28 0.08 -2.72 16 12 N -0.72 1.11 5.03 -54.83 -0.28 0.84 16 13 C 0.14 -0.29 2.45 -67.93 -0.17 -0.46 16 14 H 0.09 0.01 7.58 -51.93 -0.39 -0.38 16 15 C -0.13 0.52 5.39 -26.73 -0.14 0.38 16 16 C -0.10 0.33 4.67 -26.73 -0.12 0.21 16 17 C -0.05 0.17 2.48 -91.77 -0.23 -0.06 16 18 H 0.10 -0.56 8.14 -51.93 -0.42 -0.98 16 19 C 0.40 -0.52 6.73 -155.57 -1.05 -1.57 16 20 N -0.53 0.05 9.11 -10.64 -0.10 -0.05 16 21 C 0.16 -0.05 11.20 -17.55 -0.20 -0.25 16 22 C -0.29 -0.39 10.07 -39.26 -0.40 -0.79 16 23 C 0.52 1.69 7.75 -15.10 -0.12 1.58 16 24 O -0.54 -4.00 17.97 4.94 0.09 -3.91 16 25 N -0.63 0.25 5.25 -12.27 -0.06 0.19 16 26 C -0.11 0.33 5.18 -26.75 -0.14 0.19 16 27 C -0.13 0.31 5.49 -26.75 -0.15 0.16 16 28 C -0.11 0.06 9.46 -39.57 -0.37 -0.32 16 29 C -0.07 -0.03 10.03 -39.69 -0.40 -0.43 16 30 C -0.06 -0.08 6.35 -105.05 -0.67 -0.74 16 31 H 0.38 -1.57 8.70 45.56 0.40 -1.18 16 32 H 0.11 -0.02 7.96 -51.93 -0.41 -0.44 16 33 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 34 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 35 H 0.18 -1.10 6.35 -52.49 -0.33 -1.43 16 36 H 0.42 -1.94 8.96 -40.82 -0.37 -2.30 16 37 H 0.14 0.17 7.62 -52.49 -0.40 -0.23 16 38 H 0.40 -1.57 6.59 -40.82 -0.27 -1.84 16 39 H 0.07 -0.37 8.14 -51.92 -0.42 -0.79 16 40 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 41 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 42 H 0.09 -0.20 7.76 -51.93 -0.40 -0.60 16 43 H 0.17 -0.52 8.06 -52.49 -0.42 -0.94 16 44 H 0.16 0.07 8.06 -52.48 -0.42 -0.36 16 45 H 0.42 -1.09 8.78 -40.82 -0.36 -1.44 16 46 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 47 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 48 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 49 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 50 H 0.13 -0.43 6.36 -52.49 -0.33 -0.76 16 51 H 0.13 -0.07 8.06 -52.48 -0.42 -0.50 16 LS Contribution 420.00 15.07 6.33 6.33 Total: 0.00 -13.66 420.00 -12.88 -26.54 By element: Atomic # 1 Polarization: -10.76 SS G_CDS: -6.72 Total: -17.48 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: -6.48 Total: -3.68 kcal Atomic # 7 Polarization: 2.51 SS G_CDS: -0.50 Total: 2.01 kcal Atomic # 8 Polarization: -6.63 SS G_CDS: -0.28 Total: -6.91 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.23 Total: -6.81 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -13.66 -12.88 -26.54 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_12335838.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.153 kcal (2) G-P(sol) polarization free energy of solvation -13.659 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.881 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.540 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds