Wall clock time and date at job start Sun Mar 7 2021 03:19:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86298 * 109.46890 * 2 1 4 4 C 1.50702 * 109.47242 * 240.00238 * 2 1 3 5 5 C 1.37943 * 119.92019 * 299.97532 * 4 2 1 6 6 C 1.39594 * 119.86809 * 180.02562 * 5 4 2 7 7 C 1.47854 * 120.13584 * 180.27716 * 6 5 4 8 8 O 1.21549 * 119.99746 * 359.71855 * 7 6 5 9 9 N 1.34778 * 119.99917 * 179.72415 * 7 6 5 10 10 C 1.46502 * 119.99787 * 180.02562 * 9 7 6 11 11 H 1.09003 * 109.46922 * 324.99274 * 10 9 7 12 12 C 1.53000 * 109.47308 * 84.99374 * 10 9 7 13 13 C 1.53003 * 109.47053 * 179.97438 * 12 10 9 14 14 C 1.53001 * 109.47278 * 300.00344 * 13 12 10 15 15 H 1.08998 * 109.47363 * 299.99957 * 14 13 12 16 16 C 1.50702 * 109.46888 * 180.02562 * 14 13 12 17 17 N 1.30641 * 119.25050 * 265.00430 * 16 14 13 18 18 C 1.33522 * 121.50389 * 179.97438 * 17 16 14 19 19 C 1.36204 * 119.90792 * 359.97438 * 18 17 16 20 20 C 1.41019 * 118.59480 * 0.02562 * 19 18 17 21 21 O 1.21982 * 120.71055 * 180.02562 * 20 19 18 22 22 N 1.34741 * 119.25608 * 84.73070 * 16 14 13 23 23 C 1.53000 * 109.46845 * 59.99975 * 14 13 12 24 24 C 1.52994 * 109.47217 * 299.99877 * 23 14 13 25 25 C 1.39545 * 119.72645 * 359.97438 * 6 5 4 26 26 C 1.38069 * 119.83782 * 0.02562 * 25 6 5 27 27 Br 1.89105 * 119.93422 * 179.97438 * 26 25 6 28 28 C 1.38368 * 119.92035 * 119.99454 * 4 2 1 29 29 H 0.96701 * 114.00546 * 299.99494 * 1 2 3 30 30 H 1.08999 * 109.47273 * 119.99846 * 2 1 3 31 31 H 1.48502 * 110.00289 * 300.00215 * 3 2 1 32 32 H 1.48501 * 110.00057 * 61.31950 * 3 2 1 33 33 H 1.07994 * 120.06425 * 0.04469 * 5 4 2 34 34 H 0.96998 * 120.00180 * 359.97438 * 9 7 6 35 35 H 1.08998 * 109.47224 * 300.00409 * 12 10 9 36 36 H 1.08998 * 109.46790 * 60.00215 * 12 10 9 37 37 H 1.08995 * 109.46834 * 179.97438 * 13 12 10 38 38 H 1.08998 * 109.46888 * 60.00592 * 13 12 10 39 39 H 1.08000 * 120.04599 * 179.97438 * 18 17 16 40 40 H 1.07997 * 120.70040 * 180.02562 * 19 18 17 41 41 H 0.97002 * 120.03667 * 359.97438 * 22 16 14 42 42 H 1.08998 * 109.46710 * 179.97438 * 23 14 13 43 43 H 1.09003 * 109.47576 * 59.99992 * 23 14 13 44 44 H 1.08998 * 109.47040 * 300.00048 * 24 23 14 45 45 H 1.09007 * 109.47109 * 180.02562 * 24 23 14 46 46 H 1.07998 * 120.07755 * 180.02562 * 25 6 5 47 47 H 1.08000 * 119.86184 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5975 -2.0312 -1.4470 6 6 2.0639 -2.6883 -2.5869 7 6 1.7047 -4.1021 -2.8278 8 8 1.0061 -4.6961 -2.0300 9 7 2.1519 -4.7322 -3.9321 10 6 1.7955 -6.1330 -4.1712 11 1 1.7477 -6.6631 -3.2200 12 6 0.4322 -6.2016 -4.8623 13 6 0.0603 -7.6645 -5.1125 14 6 1.1186 -8.3141 -6.0064 15 1 1.1664 -7.7836 -6.9573 16 6 0.7519 -9.7548 -6.2532 17 7 1.2668 -10.6839 -5.4928 18 6 0.9727 -11.9741 -5.6712 19 6 0.1174 -12.3446 -6.6644 20 6 -0.4384 -11.3418 -7.4854 21 8 -1.2090 -11.6302 -8.3859 22 7 -0.1039 -10.0550 -7.2498 23 6 2.4818 -8.2454 -5.3151 24 6 2.8537 -6.7826 -5.0650 25 6 2.8653 -2.0034 -3.5011 26 6 3.1922 -0.6815 -3.2729 27 35 4.2787 0.2490 -4.5097 28 6 2.7266 -0.0362 -2.1402 29 1 -0.3934 0.4416 0.7651 30 1 1.7923 -0.5138 0.8900 31 1 1.5613 2.4680 -1.2085 32 1 1.5877 2.4586 1.2242 33 1 0.9763 -2.5557 -0.7361 34 1 2.7091 -4.2581 -4.5690 35 1 -0.3216 -5.7384 -4.2257 36 1 0.4800 -5.6715 -5.8135 37 1 -0.9111 -7.7134 -5.6045 38 1 0.0126 -8.1950 -4.1615 39 1 1.4123 -12.7228 -5.0288 40 1 -0.1297 -13.3843 -6.8198 41 1 -0.4771 -9.3478 -7.7988 42 1 3.2357 -8.7086 -5.9517 43 1 2.4342 -8.7759 -4.3641 44 1 2.9014 -6.2521 -6.0159 45 1 3.8252 -6.7337 -4.5729 46 1 3.2289 -2.5061 -4.3851 47 1 2.9856 0.9976 -1.9656 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_12335870.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:19:33 Heat of formation + Delta-G solvation = -34.020474 kcal Electronic energy + Delta-G solvation = -32566.147536 eV Core-core repulsion = 27954.685669 eV Total energy + Delta-G solvation = -4611.461867 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 434.067 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -42.87082 -41.65902 -40.45898 -39.42544 -38.38910 -37.84236 -35.94609 -35.22235 -33.71501 -33.47850 -32.31483 -32.03063 -30.51958 -30.16987 -27.11245 -26.27845 -25.51769 -24.75313 -23.96447 -22.72791 -22.70236 -21.51650 -20.95262 -19.76251 -19.17644 -18.90510 -18.69048 -17.87362 -17.70508 -17.56954 -17.00431 -16.71524 -16.33219 -16.17981 -15.98443 -15.59538 -15.54290 -15.45811 -15.34670 -14.98509 -14.86056 -14.47665 -14.36521 -14.08841 -14.06105 -14.02799 -13.71825 -13.59628 -13.36768 -12.83092 -12.68828 -12.53550 -12.44715 -12.37103 -12.06099 -12.02428 -11.89539 -11.81404 -11.53714 -11.50045 -11.21684 -11.12451 -11.02994 -10.70760 -10.34285 -10.14754 -9.92650 -9.56876 -5.11090 -0.51870 -0.47562 -0.18650 0.37694 0.78134 1.08777 1.45906 1.55272 1.56429 1.81621 1.91451 2.46284 2.54338 2.66239 3.02648 3.22107 3.31113 3.42844 3.45912 3.49499 3.59606 3.71349 3.74187 3.84594 3.93505 3.94637 3.97779 4.07104 4.09889 4.14496 4.22651 4.24749 4.25878 4.40160 4.40745 4.50522 4.56777 4.71819 4.76790 4.82569 4.84866 4.89918 4.91732 4.97143 5.06844 5.08102 5.18549 5.30440 5.38198 5.41819 5.42899 6.28206 6.30979 6.68964 6.79367 7.05442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.076 4.076 3 Si 0.676 3.324 4 C -0.072 4.072 5 C -0.016 4.016 6 C -0.129 4.129 7 C 0.564 3.436 8 O -0.525 6.525 9 N -0.723 5.723 10 C 0.143 3.857 11 H 0.096 0.904 12 C -0.128 4.128 13 C -0.108 4.108 14 C -0.046 4.046 15 H 0.101 0.899 16 C 0.403 3.597 17 N -0.533 5.533 18 C 0.156 3.844 19 C -0.293 4.293 20 C 0.520 3.480 21 O -0.537 6.537 22 N -0.627 5.627 23 C -0.095 4.095 24 C -0.129 4.129 25 C -0.054 4.054 26 C -0.094 4.094 27 Br -0.032 7.032 28 C -0.061 4.061 29 H 0.384 0.616 30 H 0.085 0.915 31 H -0.250 1.250 32 H -0.254 1.254 33 H 0.147 0.853 34 H 0.400 0.600 35 H 0.077 0.923 36 H 0.070 0.930 37 H 0.071 0.929 38 H 0.080 0.920 39 H 0.171 0.829 40 H 0.157 0.843 41 H 0.418 0.582 42 H 0.076 0.924 43 H 0.090 0.910 44 H 0.071 0.929 45 H 0.079 0.921 46 H 0.139 0.861 47 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.105 3.974 1.996 7.552 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.185 4.185 3 Si 0.576 3.424 4 C -0.073 4.073 5 C -0.035 4.035 6 C -0.133 4.133 7 C 0.350 3.650 8 O -0.402 6.402 9 N -0.374 5.374 10 C 0.039 3.961 11 H 0.114 0.886 12 C -0.167 4.167 13 C -0.148 4.148 14 C -0.067 4.067 15 H 0.119 0.881 16 C 0.138 3.862 17 N -0.256 5.256 18 C 0.018 3.982 19 C -0.318 4.318 20 C 0.318 3.682 21 O -0.415 6.415 22 N -0.265 5.265 23 C -0.134 4.134 24 C -0.167 4.167 25 C -0.075 4.075 26 C -0.173 4.173 27 Br 0.053 6.947 28 C -0.081 4.081 29 H 0.233 0.767 30 H 0.103 0.897 31 H -0.174 1.174 32 H -0.179 1.179 33 H 0.165 0.835 34 H 0.236 0.764 35 H 0.096 0.904 36 H 0.088 0.912 37 H 0.090 0.910 38 H 0.099 0.901 39 H 0.188 0.812 40 H 0.175 0.825 41 H 0.256 0.744 42 H 0.095 0.905 43 H 0.108 0.892 44 H 0.090 0.910 45 H 0.098 0.902 46 H 0.157 0.843 47 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 5.969 4.061 1.685 7.413 hybrid contribution -1.805 -0.144 -0.465 1.870 sum 4.163 3.917 1.220 5.845 Atomic orbital electron populations 1.86580 1.17242 1.80266 1.50030 1.24763 0.84973 1.11042 0.97733 0.95174 0.91623 0.74475 0.81127 1.19219 0.98270 0.93979 0.95847 1.21265 0.94051 0.92981 0.95208 1.19944 1.01886 0.94364 0.97124 1.18087 0.79755 0.85837 0.81281 1.90824 1.37048 1.66837 1.45463 1.45975 1.53798 1.13404 1.24266 1.21090 0.93949 0.80890 1.00141 0.88602 1.21915 0.97503 0.95812 1.01420 1.21561 0.97072 0.95806 1.00318 1.20563 0.98342 0.86104 1.01679 0.88070 1.23195 0.83393 0.97529 0.82084 1.68296 1.28521 1.01060 1.27725 1.22764 0.90160 0.92213 0.93059 1.22976 1.05996 1.01649 1.01133 1.17360 0.82983 0.81902 0.85952 1.91030 1.36460 1.80831 1.33164 1.44770 1.39532 1.12014 1.30230 1.21362 0.93713 0.95633 1.02654 1.21863 0.98814 0.96007 0.99998 1.21264 0.95271 0.92506 0.98408 1.21589 1.03093 0.95623 0.97041 1.96841 1.65617 1.75506 1.56688 1.21141 0.95472 0.99755 0.91712 0.76732 0.89726 1.17437 1.17911 0.83517 0.76435 0.90424 0.91169 0.91033 0.90092 0.81224 0.82519 0.74374 0.90518 0.89150 0.91015 0.90209 0.84330 0.84052 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.09 12.74 -35.23 -0.45 -0.54 16 2 C -0.08 0.09 2.81 36.01 0.10 0.20 16 3 Si 0.68 -1.31 29.78 -169.99 -5.06 -6.37 16 4 C -0.07 0.00 5.42 -104.68 -0.57 -0.56 16 5 C -0.02 -0.01 9.15 -39.18 -0.36 -0.37 16 6 C -0.13 -0.01 5.87 -104.97 -0.62 -0.63 16 7 C 0.56 0.47 7.74 -12.32 -0.10 0.38 16 8 O -0.53 -2.37 16.01 5.32 0.09 -2.28 16 9 N -0.72 1.73 5.03 -54.75 -0.28 1.45 16 10 C 0.14 -0.39 2.45 -67.93 -0.17 -0.56 16 11 H 0.10 -0.06 7.58 -51.93 -0.39 -0.46 16 12 C -0.13 0.37 5.50 -26.73 -0.15 0.22 16 13 C -0.11 0.37 5.19 -26.73 -0.14 0.23 16 14 C -0.05 0.19 2.48 -91.77 -0.23 -0.04 16 15 H 0.10 -0.60 8.14 -51.93 -0.42 -1.02 16 16 C 0.40 -0.64 6.73 -155.57 -1.05 -1.69 16 17 N -0.53 0.21 9.12 -10.63 -0.10 0.11 16 18 C 0.16 -0.09 11.20 -17.55 -0.20 -0.28 16 19 C -0.29 -0.34 10.07 -39.26 -0.40 -0.73 16 20 C 0.52 1.60 7.75 -15.09 -0.12 1.48 16 21 O -0.54 -3.93 17.97 4.93 0.09 -3.84 16 22 N -0.63 0.39 5.25 -12.27 -0.06 0.32 16 23 C -0.10 0.38 4.67 -26.73 -0.12 0.25 16 24 C -0.13 0.61 5.39 -26.74 -0.14 0.46 16 25 C -0.05 0.09 9.28 -39.16 -0.36 -0.28 16 26 C -0.09 0.08 6.22 -39.58 -0.25 -0.17 16 27 Br -0.03 0.03 33.69 -68.01 -2.29 -2.26 16 28 C -0.06 0.04 8.41 -39.47 -0.33 -0.29 16 29 H 0.38 -1.44 8.74 45.56 0.40 -1.04 16 30 H 0.08 -0.25 7.96 -51.93 -0.41 -0.67 16 31 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 32 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 33 H 0.15 0.24 7.65 -52.49 -0.40 -0.16 16 34 H 0.40 -1.94 6.64 -40.82 -0.27 -2.21 16 35 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 36 H 0.07 -0.27 8.14 -51.93 -0.42 -0.70 16 37 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 38 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 39 H 0.17 -0.56 8.06 -52.49 -0.42 -0.98 16 40 H 0.16 0.04 8.06 -52.49 -0.42 -0.38 16 41 H 0.42 -1.17 8.78 -40.82 -0.36 -1.53 16 42 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 43 H 0.09 -0.24 7.76 -51.93 -0.40 -0.65 16 44 H 0.07 -0.42 8.14 -51.93 -0.42 -0.84 16 45 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 46 H 0.14 -0.59 6.40 -52.49 -0.34 -0.92 16 47 H 0.14 -0.30 4.86 -52.49 -0.26 -0.55 16 LS Contribution 407.74 15.07 6.14 6.14 Total: 0.00 -11.52 407.74 -12.96 -24.48 By element: Atomic # 1 Polarization: -8.99 SS G_CDS: -5.86 Total: -14.85 kcal Atomic # 6 Polarization: 2.81 SS G_CDS: -5.18 Total: -2.37 kcal Atomic # 7 Polarization: 2.32 SS G_CDS: -0.44 Total: 1.89 kcal Atomic # 8 Polarization: -6.39 SS G_CDS: -0.27 Total: -6.66 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.06 Total: -6.37 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -11.52 -12.96 -24.48 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_12335870.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.543 kcal (2) G-P(sol) polarization free energy of solvation -11.516 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.962 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.478 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.020 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds