Wall clock time and date at job start Sun Mar 7 2021 03:19:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86298 * 109.46890 * 2 1 4 4 C 1.50702 * 109.47242 * 240.00238 * 2 1 3 5 5 C 1.37943 * 119.92019 * 299.97532 * 4 2 1 6 6 C 1.39594 * 119.86809 * 180.02562 * 5 4 2 7 7 C 1.47854 * 120.13584 * 180.27716 * 6 5 4 8 8 O 1.21549 * 119.99746 * 359.71855 * 7 6 5 9 9 N 1.34778 * 119.99917 * 179.72415 * 7 6 5 10 10 C 1.46502 * 119.99787 * 180.02562 * 9 7 6 11 11 H 1.09003 * 109.46922 * 324.99274 * 10 9 7 12 12 C 1.53000 * 109.47308 * 84.99374 * 10 9 7 13 13 C 1.53003 * 109.47053 * 179.97438 * 12 10 9 14 14 C 1.53001 * 109.47278 * 300.00344 * 13 12 10 15 15 H 1.08998 * 109.47363 * 299.99957 * 14 13 12 16 16 C 1.50702 * 109.46888 * 180.02562 * 14 13 12 17 17 N 1.30641 * 119.25050 * 265.00430 * 16 14 13 18 18 C 1.33522 * 121.50389 * 179.97438 * 17 16 14 19 19 C 1.36204 * 119.90792 * 359.97438 * 18 17 16 20 20 C 1.41019 * 118.59480 * 0.02562 * 19 18 17 21 21 O 1.21982 * 120.71055 * 180.02562 * 20 19 18 22 22 N 1.34741 * 119.25608 * 84.73070 * 16 14 13 23 23 C 1.53000 * 109.46845 * 59.99975 * 14 13 12 24 24 C 1.52994 * 109.47217 * 299.99877 * 23 14 13 25 25 C 1.39545 * 119.72645 * 359.97438 * 6 5 4 26 26 C 1.38069 * 119.83782 * 0.02562 * 25 6 5 27 27 Br 1.89105 * 119.93422 * 179.97438 * 26 25 6 28 28 C 1.38368 * 119.92035 * 119.99454 * 4 2 1 29 29 H 0.96701 * 114.00546 * 299.99494 * 1 2 3 30 30 H 1.08999 * 109.47273 * 119.99846 * 2 1 3 31 31 H 1.48502 * 110.00289 * 300.00215 * 3 2 1 32 32 H 1.48501 * 110.00057 * 61.31950 * 3 2 1 33 33 H 1.07994 * 120.06425 * 0.04469 * 5 4 2 34 34 H 0.96998 * 120.00180 * 359.97438 * 9 7 6 35 35 H 1.08998 * 109.47224 * 300.00409 * 12 10 9 36 36 H 1.08998 * 109.46790 * 60.00215 * 12 10 9 37 37 H 1.08995 * 109.46834 * 179.97438 * 13 12 10 38 38 H 1.08998 * 109.46888 * 60.00592 * 13 12 10 39 39 H 1.08000 * 120.04599 * 179.97438 * 18 17 16 40 40 H 1.07997 * 120.70040 * 180.02562 * 19 18 17 41 41 H 0.97002 * 120.03667 * 359.97438 * 22 16 14 42 42 H 1.08998 * 109.46710 * 179.97438 * 23 14 13 43 43 H 1.09003 * 109.47576 * 59.99992 * 23 14 13 44 44 H 1.08998 * 109.47040 * 300.00048 * 24 23 14 45 45 H 1.09007 * 109.47109 * 180.02562 * 24 23 14 46 46 H 1.07998 * 120.07755 * 180.02562 * 25 6 5 47 47 H 1.08000 * 119.86184 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5975 -2.0312 -1.4470 6 6 2.0639 -2.6883 -2.5869 7 6 1.7047 -4.1021 -2.8278 8 8 1.0061 -4.6961 -2.0300 9 7 2.1519 -4.7322 -3.9321 10 6 1.7955 -6.1330 -4.1712 11 1 1.7477 -6.6631 -3.2200 12 6 0.4322 -6.2016 -4.8623 13 6 0.0603 -7.6645 -5.1125 14 6 1.1186 -8.3141 -6.0064 15 1 1.1664 -7.7836 -6.9573 16 6 0.7519 -9.7548 -6.2532 17 7 1.2668 -10.6839 -5.4928 18 6 0.9727 -11.9741 -5.6712 19 6 0.1174 -12.3446 -6.6644 20 6 -0.4384 -11.3418 -7.4854 21 8 -1.2090 -11.6302 -8.3859 22 7 -0.1039 -10.0550 -7.2498 23 6 2.4818 -8.2454 -5.3151 24 6 2.8537 -6.7826 -5.0650 25 6 2.8653 -2.0034 -3.5011 26 6 3.1922 -0.6815 -3.2729 27 35 4.2787 0.2490 -4.5097 28 6 2.7266 -0.0362 -2.1402 29 1 -0.3934 0.4416 0.7651 30 1 1.7923 -0.5138 0.8900 31 1 1.5613 2.4680 -1.2085 32 1 1.5877 2.4586 1.2242 33 1 0.9763 -2.5557 -0.7361 34 1 2.7091 -4.2581 -4.5690 35 1 -0.3216 -5.7384 -4.2257 36 1 0.4800 -5.6715 -5.8135 37 1 -0.9111 -7.7134 -5.6045 38 1 0.0126 -8.1950 -4.1615 39 1 1.4123 -12.7228 -5.0288 40 1 -0.1297 -13.3843 -6.8198 41 1 -0.4771 -9.3478 -7.7988 42 1 3.2357 -8.7086 -5.9517 43 1 2.4342 -8.7759 -4.3641 44 1 2.9014 -6.2521 -6.0159 45 1 3.8252 -6.7337 -4.5729 46 1 3.2289 -2.5061 -4.3851 47 1 2.9856 0.9976 -1.9656 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_12335870.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:19:32 Heat of formation + Delta-G solvation = -35.986335 kcal Electronic energy + Delta-G solvation = -32566.232782 eV Core-core repulsion = 27954.685669 eV Total energy + Delta-G solvation = -4611.547113 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 434.067 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -42.89668 -41.63428 -40.36142 -39.45836 -38.46433 -37.79638 -35.91663 -35.23635 -33.65457 -33.43934 -32.28571 -31.78055 -30.45086 -30.07407 -27.02911 -26.22118 -25.53592 -24.72517 -23.72372 -22.66224 -22.59594 -21.43665 -20.78514 -19.76987 -19.20018 -18.83938 -18.63462 -17.82461 -17.68512 -17.50098 -17.06889 -16.63449 -16.29428 -16.16326 -15.93709 -15.62645 -15.46173 -15.37324 -15.14850 -14.94378 -14.81869 -14.45788 -14.28175 -14.07242 -14.01212 -13.96043 -13.63150 -13.42518 -13.15794 -12.81165 -12.52411 -12.40334 -12.33635 -12.11834 -12.02855 -12.00081 -11.85500 -11.60049 -11.46870 -11.38081 -11.31699 -11.10351 -11.05212 -10.63397 -10.30747 -10.04080 -9.86649 -9.66670 -4.98345 -0.48555 -0.45274 -0.12850 0.44892 0.68028 1.20201 1.55004 1.56120 1.57004 1.89851 2.00751 2.48651 2.50425 2.78229 3.15686 3.37818 3.45389 3.58390 3.59379 3.65461 3.72460 3.81620 3.90576 3.98051 4.01143 4.15711 4.17975 4.19065 4.29570 4.32335 4.36956 4.41241 4.50356 4.51760 4.52924 4.65529 4.78899 4.83853 4.88778 4.95660 5.01323 5.07830 5.12157 5.18188 5.23849 5.31939 5.35499 5.37305 5.42100 5.47556 5.56839 6.43241 6.52653 6.66734 6.71168 7.10326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.087 4.087 3 Si 0.756 3.244 4 C -0.080 4.080 5 C -0.032 4.032 6 C -0.137 4.137 7 C 0.561 3.439 8 O -0.572 6.572 9 N -0.705 5.705 10 C 0.142 3.858 11 H 0.070 0.930 12 C -0.122 4.122 13 C -0.104 4.104 14 C -0.040 4.040 15 H 0.132 0.868 16 C 0.409 3.591 17 N -0.544 5.544 18 C 0.173 3.827 19 C -0.319 4.319 20 C 0.509 3.491 21 O -0.594 6.594 22 N -0.615 5.615 23 C -0.092 4.092 24 C -0.118 4.118 25 C -0.043 4.043 26 C -0.099 4.099 27 Br -0.027 7.027 28 C -0.064 4.064 29 H 0.398 0.602 30 H 0.102 0.898 31 H -0.291 1.291 32 H -0.280 1.280 33 H 0.130 0.870 34 H 0.415 0.585 35 H 0.050 0.950 36 H 0.091 0.909 37 H 0.076 0.924 38 H 0.063 0.937 39 H 0.198 0.802 40 H 0.158 0.842 41 H 0.428 0.572 42 H 0.083 0.917 43 H 0.074 0.926 44 H 0.096 0.904 45 H 0.083 0.917 46 H 0.168 0.832 47 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.078 4.937 1.190 9.541 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.195 4.195 3 Si 0.660 3.340 4 C -0.081 4.081 5 C -0.051 4.051 6 C -0.141 4.141 7 C 0.349 3.651 8 O -0.452 6.452 9 N -0.357 5.357 10 C 0.038 3.962 11 H 0.088 0.912 12 C -0.160 4.160 13 C -0.143 4.143 14 C -0.060 4.060 15 H 0.150 0.850 16 C 0.145 3.855 17 N -0.267 5.267 18 C 0.034 3.966 19 C -0.343 4.343 20 C 0.309 3.691 21 O -0.476 6.476 22 N -0.253 5.253 23 C -0.131 4.131 24 C -0.156 4.156 25 C -0.063 4.063 26 C -0.179 4.179 27 Br 0.059 6.941 28 C -0.084 4.084 29 H 0.249 0.751 30 H 0.120 0.880 31 H -0.219 1.219 32 H -0.207 1.207 33 H 0.148 0.852 34 H 0.254 0.746 35 H 0.069 0.931 36 H 0.109 0.891 37 H 0.095 0.905 38 H 0.082 0.918 39 H 0.215 0.785 40 H 0.176 0.824 41 H 0.269 0.731 42 H 0.101 0.899 43 H 0.093 0.907 44 H 0.115 0.885 45 H 0.102 0.898 46 H 0.185 0.815 47 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 7.987 5.054 0.876 9.492 hybrid contribution -2.393 -0.369 -0.141 2.425 sum 5.594 4.685 0.735 7.334 Atomic orbital electron populations 1.86538 1.18165 1.80811 1.51251 1.25020 0.84435 1.11981 0.98098 0.94303 0.90290 0.72017 0.77343 1.19349 0.98511 0.93709 0.96518 1.21251 0.94631 0.93580 0.95636 1.19923 1.02594 0.94099 0.97452 1.18267 0.79264 0.86085 0.81491 1.90801 1.39329 1.67832 1.47212 1.45872 1.52893 1.13503 1.23438 1.21122 0.95044 0.80464 0.99566 0.91200 1.21840 0.96483 0.95999 1.01723 1.21487 0.97675 0.95370 0.99745 1.20685 0.97909 0.84475 1.02944 0.84980 1.23729 0.82234 0.98518 0.81023 1.68393 1.28954 1.01332 1.28020 1.23183 0.88590 0.92741 0.92111 1.23001 1.07555 1.01570 1.02217 1.17665 0.82596 0.83201 0.85589 1.90989 1.39186 1.81877 1.35596 1.44634 1.39036 1.11343 1.30242 1.21325 0.93706 0.96038 1.01996 1.21804 0.97908 0.95342 1.00554 1.21482 0.94027 0.92203 0.98614 1.21706 1.03139 0.95954 0.97073 1.96852 1.65405 1.75483 1.56366 1.21311 0.95157 1.00257 0.91657 0.75075 0.87978 1.21850 1.20651 0.85181 0.74644 0.93131 0.89073 0.90522 0.91822 0.78505 0.82395 0.73099 0.89863 0.90695 0.88547 0.89788 0.81510 0.82976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.71 12.74 -148.98 -1.90 -2.61 16 2 C -0.09 0.18 2.81 71.24 0.20 0.38 16 3 Si 0.76 -2.84 29.78 68.60 2.04 -0.80 16 4 C -0.08 -0.04 5.42 -19.90 -0.11 -0.14 16 5 C -0.03 -0.10 9.15 22.53 0.21 0.11 16 6 C -0.14 -0.08 5.87 -20.09 -0.12 -0.20 16 7 C 0.56 1.40 7.74 86.79 0.67 2.07 16 8 O -0.57 -6.46 16.01 -3.87 -0.06 -6.53 16 9 N -0.71 3.83 5.03 -445.40 -2.24 1.59 16 10 C 0.14 -0.83 2.45 44.99 0.11 -0.72 16 11 H 0.07 0.00 7.58 -2.39 -0.02 -0.02 16 12 C -0.12 0.75 5.50 30.60 0.17 0.92 16 13 C -0.10 0.74 5.19 30.60 0.16 0.90 16 14 C -0.04 0.39 2.48 -11.54 -0.03 0.36 16 15 H 0.13 -2.01 8.14 -2.39 -0.02 -2.03 16 16 C 0.41 -1.63 6.73 138.18 0.93 -0.70 16 17 N -0.54 0.78 9.12 -187.56 -1.71 -0.93 16 18 C 0.17 -0.27 11.20 83.96 0.94 0.67 16 19 C -0.32 -1.00 10.07 22.48 0.23 -0.78 16 20 C 0.51 3.75 7.75 84.88 0.66 4.40 16 21 O -0.59 -9.99 17.97 -5.26 -0.09 -10.09 16 22 N -0.62 0.81 5.25 -310.69 -1.63 -0.83 16 23 C -0.09 0.88 4.67 30.59 0.14 1.02 16 24 C -0.12 1.36 5.39 30.59 0.16 1.52 16 25 C -0.04 0.18 9.28 22.54 0.21 0.39 16 26 C -0.10 0.25 6.22 22.27 0.14 0.39 16 27 Br -0.03 0.09 33.69 -20.37 -0.69 -0.60 16 28 C -0.06 0.10 8.41 22.34 0.19 0.29 16 29 H 0.40 -2.68 8.74 -74.06 -0.65 -3.33 16 30 H 0.10 -0.60 7.96 -2.39 -0.02 -0.62 16 31 H -0.29 -0.90 7.11 99.48 0.71 -0.19 16 32 H -0.28 -0.10 7.11 99.48 0.71 0.60 16 33 H 0.13 0.78 7.65 -2.91 -0.02 0.76 16 34 H 0.42 -4.90 6.64 -92.71 -0.62 -5.52 16 35 H 0.05 0.01 8.14 -2.39 -0.02 -0.01 16 36 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 37 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 38 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 39 H 0.20 -1.54 8.06 -2.91 -0.02 -1.56 16 40 H 0.16 0.32 8.06 -2.91 -0.02 0.29 16 41 H 0.43 -2.56 8.78 -92.71 -0.81 -3.38 16 42 H 0.08 -0.83 8.14 -2.39 -0.02 -0.85 16 43 H 0.07 -0.44 7.76 -2.39 -0.02 -0.45 16 44 H 0.10 -1.50 8.14 -2.39 -0.02 -1.52 16 45 H 0.08 -0.95 8.14 -2.38 -0.02 -0.97 16 46 H 0.17 -1.81 6.40 -2.91 -0.02 -1.83 16 47 H 0.15 -0.69 4.86 -2.91 -0.01 -0.70 16 Total: 0.00 -30.60 407.74 -2.40 -33.00 By element: Atomic # 1 Polarization: -22.14 SS G_CDS: -0.98 Total: -23.12 kcal Atomic # 6 Polarization: 6.04 SS G_CDS: 4.86 Total: 10.90 kcal Atomic # 7 Polarization: 5.41 SS G_CDS: -5.58 Total: -0.17 kcal Atomic # 8 Polarization: -17.17 SS G_CDS: -2.05 Total: -19.23 kcal Atomic # 14 Polarization: -2.84 SS G_CDS: 2.04 Total: -0.80 kcal Atomic # 35 Polarization: 0.09 SS G_CDS: -0.69 Total: -0.60 kcal Total: -30.60 -2.40 -33.00 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_12335870.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.987 kcal (2) G-P(sol) polarization free energy of solvation -30.604 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.591 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.396 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.000 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds