Wall clock time and date at job start Sun Mar 7 2021 03:19:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86294 * 109.47355 * 2 1 4 4 C 1.50700 * 109.46895 * 120.00142 * 2 1 3 5 5 C 1.38192 * 119.84468 * 14.99520 * 4 2 1 6 6 C 1.38308 * 120.14595 * 180.02562 * 5 4 2 7 7 F 1.35103 * 120.08241 * 179.97438 * 6 5 4 8 8 C 1.39808 * 119.83364 * 359.97438 * 6 5 4 9 9 C 1.47693 * 120.15621 * 179.97438 * 8 6 5 10 10 O 1.21571 * 120.00153 * 359.97438 * 9 8 6 11 11 N 1.34774 * 120.00148 * 180.02562 * 9 8 6 12 12 C 1.46493 * 120.00322 * 179.97438 * 11 9 8 13 13 H 1.09002 * 109.47125 * 325.00490 * 12 11 9 14 14 C 1.53006 * 109.47201 * 84.99786 * 12 11 9 15 15 C 1.52991 * 109.47355 * 180.02562 * 14 12 11 16 16 C 1.53003 * 109.47341 * 299.99881 * 15 14 12 17 17 H 1.08997 * 109.47180 * 300.00302 * 16 15 14 18 18 C 1.50699 * 109.47197 * 179.97438 * 16 15 14 19 19 N 1.30641 * 119.25928 * 264.73141 * 18 16 15 20 20 C 1.33517 * 121.50937 * 180.27396 * 19 18 16 21 21 C 1.36204 * 119.90668 * 0.02562 * 20 19 18 22 22 C 1.41021 * 118.59718 * 359.97438 * 21 20 19 23 23 O 1.21977 * 120.71177 * 180.02562 * 22 21 20 24 24 N 1.34754 * 119.25082 * 85.00369 * 18 16 15 25 25 C 1.53003 * 109.46593 * 60.00283 * 16 15 14 26 26 C 1.52999 * 109.47042 * 299.99455 * 25 16 15 27 27 C 1.39655 * 119.68884 * 0.25012 * 8 6 5 28 28 C 1.38075 * 119.85171 * 359.51840 * 27 8 6 29 29 F 1.35097 * 119.91677 * 180.23131 * 28 27 8 30 30 H 0.96698 * 114.00472 * 300.00477 * 1 2 3 31 31 H 1.09007 * 109.47482 * 239.99684 * 2 1 3 32 32 H 1.48504 * 110.00218 * 178.68174 * 3 2 1 33 33 H 1.48499 * 109.99915 * 299.99872 * 3 2 1 34 34 H 1.07998 * 119.92598 * 359.97438 * 5 4 2 35 35 H 0.97005 * 119.99977 * 359.97438 * 11 9 8 36 36 H 1.08997 * 109.47200 * 300.00534 * 14 12 11 37 37 H 1.08997 * 109.46826 * 60.00001 * 14 12 11 38 38 H 1.09001 * 109.47384 * 180.02562 * 15 14 12 39 39 H 1.08997 * 109.47230 * 60.00153 * 15 14 12 40 40 H 1.07993 * 120.04677 * 180.02562 * 20 19 18 41 41 H 1.08003 * 120.70334 * 180.02562 * 21 20 19 42 42 H 0.97001 * 120.04099 * 359.74078 * 24 18 16 43 43 H 1.08997 * 109.47342 * 60.00118 * 25 16 15 44 44 H 1.09007 * 109.47038 * 179.97438 * 25 16 15 45 45 H 1.08999 * 109.46946 * 179.97438 * 26 25 16 46 46 H 1.08997 * 109.47593 * 300.00509 * 26 25 16 47 47 H 1.08007 * 120.07501 * 179.72524 * 27 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.0688 -1.4962 1.9711 6 6 1.5231 -2.1506 3.1017 7 9 0.6787 -2.9180 3.8252 8 6 2.8582 -2.0159 3.4941 9 6 3.3506 -2.7111 4.7006 10 8 2.5944 -3.4020 5.3553 11 7 4.6382 -2.5786 5.0763 12 6 5.1265 -3.2677 6.2733 13 1 4.3371 -3.2948 7.0245 14 6 5.5329 -4.6971 5.9089 15 6 6.0423 -5.4169 7.1591 16 6 7.2539 -4.6696 7.7198 17 1 8.0436 -4.6426 6.9689 18 6 7.7554 -5.3783 8.9516 19 7 7.3553 -4.9746 10.1279 20 6 7.7753 -5.5662 11.2488 21 6 8.6409 -6.6155 11.1795 22 6 9.0729 -7.0516 9.9099 23 8 9.8474 -7.9878 9.8030 24 7 8.6106 -6.4107 8.8150 25 6 6.8476 -3.2403 8.0843 26 6 6.3382 -2.5204 6.8340 27 6 3.7225 -1.2163 2.7432 28 6 3.2566 -0.5727 1.6140 29 9 4.0928 0.1973 0.8840 30 1 -0.3934 0.4417 0.7650 31 1 1.7924 -0.5139 -0.8900 32 1 3.5347 1.7702 0.0321 33 1 1.5616 2.4678 -1.2085 34 1 0.0377 -1.5988 1.6668 35 1 5.2415 -2.0270 4.5541 36 1 4.6696 -5.2296 5.5098 37 1 6.3222 -4.6701 5.1577 38 1 6.3322 -6.4351 6.8994 39 1 5.2527 -5.4439 7.9099 40 1 7.4290 -5.2133 12.2089 41 1 8.9886 -7.1038 12.0780 42 1 8.8941 -6.6929 7.9313 43 1 6.0579 -3.2673 8.8352 44 1 7.7106 -2.7079 8.4842 45 1 6.0483 -1.5023 7.0938 46 1 7.1278 -2.4933 6.0832 47 1 4.7540 -1.1043 3.0432 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_12360598.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:19:47 Heat of formation + Delta-G solvation = -114.039266 kcal Electronic energy + Delta-G solvation = -35788.727589 eV Core-core repulsion = 30574.705899 eV Total energy + Delta-G solvation = -5214.021690 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.138 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -50.51748 -49.99327 -42.88454 -41.52336 -40.37060 -39.50982 -38.43277 -37.76983 -35.96435 -35.23564 -33.46910 -32.35615 -32.06470 -31.51211 -30.26135 -28.00667 -25.95127 -25.39491 -24.32598 -23.98357 -23.94504 -22.72677 -21.75991 -21.21531 -19.81310 -19.64506 -19.17053 -19.09132 -18.60310 -18.00415 -17.80252 -17.53868 -17.34619 -17.12571 -16.96962 -16.68358 -16.19479 -16.13632 -15.93229 -15.84537 -15.81590 -15.60696 -15.49269 -15.33546 -15.15713 -14.57349 -14.47961 -14.20850 -14.13429 -14.07261 -13.77072 -13.63882 -13.43324 -13.28430 -13.05312 -12.71600 -12.60878 -12.54266 -12.39798 -12.07751 -11.85058 -11.57765 -11.53718 -11.22993 -11.13932 -11.10817 -11.03813 -10.37055 -10.25285 -9.78022 -9.58177 -5.15383 -0.83980 -0.48926 -0.38350 0.76873 1.01697 1.44297 1.53569 1.53848 1.78128 1.89057 2.25920 2.53026 2.63842 2.70541 2.75018 2.99179 3.05774 3.21143 3.32748 3.34405 3.45849 3.47888 3.58222 3.69471 3.72024 3.91293 3.94367 4.02868 4.06744 4.11405 4.20773 4.21695 4.23197 4.28076 4.37059 4.49049 4.52988 4.54159 4.64238 4.66561 4.75298 4.79893 4.82943 4.88360 4.94908 5.04124 5.15068 5.27364 5.33684 5.39923 5.41542 6.21731 6.24193 6.67566 6.78113 6.97541 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.072 4.072 3 Si 0.687 3.313 4 C -0.091 4.091 5 C -0.125 4.125 6 C 0.162 3.838 7 F -0.105 7.105 8 C -0.152 4.152 9 C 0.561 3.439 10 O -0.512 6.512 11 N -0.721 5.721 12 C 0.143 3.857 13 H 0.097 0.903 14 C -0.128 4.128 15 C -0.109 4.109 16 C -0.047 4.047 17 H 0.101 0.899 18 C 0.403 3.597 19 N -0.532 5.532 20 C 0.156 3.844 21 C -0.293 4.293 22 C 0.520 3.480 23 O -0.537 6.537 24 N -0.627 5.627 25 C -0.095 4.095 26 C -0.129 4.129 27 C -0.085 4.085 28 C 0.074 3.926 29 F -0.118 7.118 30 H 0.383 0.617 31 H 0.130 0.870 32 H -0.226 1.226 33 H -0.256 1.256 34 H 0.163 0.837 35 H 0.400 0.600 36 H 0.077 0.923 37 H 0.070 0.930 38 H 0.071 0.929 39 H 0.081 0.919 40 H 0.171 0.829 41 H 0.157 0.843 42 H 0.417 0.583 43 H 0.090 0.910 44 H 0.076 0.924 45 H 0.079 0.921 46 H 0.071 0.929 47 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.042 6.831 -1.382 6.969 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.181 4.181 3 Si 0.586 3.414 4 C -0.092 4.092 5 C -0.144 4.144 6 C 0.141 3.859 7 F -0.083 7.083 8 C -0.156 4.156 9 C 0.347 3.653 10 O -0.388 6.388 11 N -0.374 5.374 12 C 0.040 3.960 13 H 0.115 0.885 14 C -0.167 4.167 15 C -0.148 4.148 16 C -0.067 4.067 17 H 0.119 0.881 18 C 0.138 3.862 19 N -0.256 5.256 20 C 0.018 3.982 21 C -0.317 4.317 22 C 0.318 3.682 23 O -0.415 6.415 24 N -0.266 5.266 25 C -0.134 4.134 26 C -0.167 4.167 27 C -0.104 4.104 28 C 0.055 3.945 29 F -0.097 7.097 30 H 0.231 0.769 31 H 0.147 0.853 32 H -0.149 1.149 33 H -0.181 1.181 34 H 0.181 0.819 35 H 0.235 0.765 36 H 0.096 0.904 37 H 0.088 0.912 38 H 0.090 0.910 39 H 0.100 0.900 40 H 0.188 0.812 41 H 0.175 0.825 42 H 0.256 0.744 43 H 0.109 0.891 44 H 0.095 0.905 45 H 0.098 0.902 46 H 0.090 0.910 47 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.031 6.618 -1.482 6.782 hybrid contribution 1.106 -1.315 -0.792 1.892 sum 1.137 5.303 -2.274 5.881 Atomic orbital electron populations 1.86533 1.16434 1.81395 1.49624 1.25158 0.85809 1.10710 0.96457 0.95147 0.81909 0.75770 0.88567 1.20456 0.92198 0.98113 0.98459 1.20859 1.02493 0.97340 0.93717 1.17630 0.86644 0.91230 0.90375 1.91656 1.69152 1.71695 1.75798 1.19862 0.93437 1.03367 0.98920 1.17832 0.82348 0.81114 0.83964 1.90898 1.55444 1.38680 1.53752 1.45933 1.10519 1.51464 1.29434 1.21104 0.96973 0.91181 0.86790 0.88516 1.21914 1.01943 0.95469 0.97328 1.21562 0.96425 0.98667 0.98117 1.20563 0.99213 0.96220 0.90696 0.88071 1.23189 0.83711 0.83404 0.95922 1.68289 1.28963 1.31917 0.96418 1.22762 0.89179 0.89304 0.96950 1.22980 1.06800 1.03906 0.98040 1.17360 0.82287 0.83527 0.85023 1.91030 1.35767 1.28431 1.86240 1.44774 1.39481 1.29126 1.13180 1.21366 1.02988 0.91557 0.97467 1.21864 0.96836 0.99953 0.98000 1.21103 1.00568 0.95453 0.93295 1.17221 0.87983 0.96476 0.92847 1.91602 1.70820 1.71606 1.75624 0.76918 0.85286 1.14931 1.18108 0.81925 0.76478 0.90407 0.91177 0.91006 0.90044 0.81213 0.82509 0.74384 0.89112 0.90501 0.90193 0.91028 0.83143 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.14 11.63 -35.23 -0.41 0.73 16 2 C -0.07 0.16 2.96 36.01 0.11 0.27 16 3 Si 0.69 -1.66 30.81 -169.99 -5.24 -6.89 16 4 C -0.09 0.19 5.14 -104.48 -0.54 -0.35 16 5 C -0.13 0.21 9.20 -39.57 -0.36 -0.15 16 6 C 0.16 0.05 7.28 -38.97 -0.28 -0.24 16 7 F -0.11 -0.32 15.55 2.25 0.04 -0.28 16 8 C -0.15 0.11 5.88 -104.92 -0.62 -0.51 16 9 C 0.56 0.25 7.73 -12.40 -0.10 0.16 16 10 O -0.51 -2.32 15.00 5.30 0.08 -2.24 16 11 N -0.72 2.15 5.03 -54.80 -0.28 1.88 16 12 C 0.14 -0.45 2.45 -67.93 -0.17 -0.62 16 13 H 0.10 -0.09 7.58 -51.93 -0.39 -0.49 16 14 C -0.13 0.42 5.49 -26.73 -0.15 0.27 16 15 C -0.11 0.40 5.19 -26.73 -0.14 0.26 16 16 C -0.05 0.20 2.48 -91.77 -0.23 -0.03 16 17 H 0.10 -0.63 8.14 -51.93 -0.42 -1.05 16 18 C 0.40 -0.73 6.73 -155.56 -1.05 -1.77 16 19 N -0.53 0.31 9.11 -10.63 -0.10 0.21 16 20 C 0.16 -0.11 11.20 -17.55 -0.20 -0.31 16 21 C -0.29 -0.30 10.07 -39.26 -0.40 -0.69 16 22 C 0.52 1.52 7.75 -15.09 -0.12 1.40 16 23 O -0.54 -3.85 17.97 4.94 0.09 -3.76 16 24 N -0.63 0.51 5.25 -12.27 -0.06 0.44 16 25 C -0.10 0.41 4.66 -26.73 -0.12 0.28 16 26 C -0.13 0.66 5.39 -26.73 -0.14 0.51 16 27 C -0.08 0.25 9.51 -39.11 -0.37 -0.12 16 28 C 0.07 -0.15 6.65 -39.49 -0.26 -0.41 16 29 F -0.12 0.10 12.80 2.25 0.03 0.13 16 30 H 0.38 -2.36 8.42 45.56 0.38 -1.97 16 31 H 0.13 -0.24 7.96 -51.92 -0.41 -0.66 16 32 H -0.23 0.07 5.27 56.52 0.30 0.36 16 33 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 34 H 0.16 -0.47 7.06 -52.49 -0.37 -0.84 16 35 H 0.40 -2.29 6.64 -40.82 -0.27 -2.56 16 36 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 37 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 38 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 39 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 40 H 0.17 -0.58 8.06 -52.49 -0.42 -1.00 16 41 H 0.16 0.02 8.06 -52.48 -0.42 -0.40 16 42 H 0.42 -1.25 8.78 -40.82 -0.36 -1.61 16 43 H 0.09 -0.27 7.76 -51.93 -0.40 -0.67 16 44 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 45 H 0.08 -0.40 8.14 -51.93 -0.42 -0.83 16 46 H 0.07 -0.45 8.14 -51.93 -0.42 -0.87 16 47 H 0.15 -0.89 6.41 -52.48 -0.34 -1.22 16 LS Contribution 393.15 15.07 5.92 5.92 Total: 0.00 -12.10 393.15 -10.75 -22.85 By element: Atomic # 1 Polarization: -11.26 SS G_CDS: -5.69 Total: -16.95 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: -5.13 Total: -2.03 kcal Atomic # 7 Polarization: 2.97 SS G_CDS: -0.44 Total: 2.53 kcal Atomic # 8 Polarization: -5.04 SS G_CDS: -0.24 Total: -5.28 kcal Atomic # 9 Polarization: -0.21 SS G_CDS: 0.06 Total: -0.15 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: -5.24 Total: -6.89 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -12.10 -10.75 -22.85 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_12360598.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.191 kcal (2) G-P(sol) polarization free energy of solvation -12.100 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.291 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.748 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.848 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.039 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds