Wall clock time and date at job start Sun Mar 7 2021 03:19:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86294 * 109.47355 * 2 1 4 4 C 1.50700 * 109.46895 * 120.00142 * 2 1 3 5 5 C 1.38192 * 119.84468 * 14.99520 * 4 2 1 6 6 C 1.38308 * 120.14595 * 180.02562 * 5 4 2 7 7 F 1.35103 * 120.08241 * 179.97438 * 6 5 4 8 8 C 1.39808 * 119.83364 * 359.97438 * 6 5 4 9 9 C 1.47693 * 120.15621 * 179.97438 * 8 6 5 10 10 O 1.21571 * 120.00153 * 359.97438 * 9 8 6 11 11 N 1.34774 * 120.00148 * 180.02562 * 9 8 6 12 12 C 1.46493 * 120.00322 * 179.97438 * 11 9 8 13 13 H 1.09002 * 109.47125 * 325.00490 * 12 11 9 14 14 C 1.53006 * 109.47201 * 84.99786 * 12 11 9 15 15 C 1.52991 * 109.47355 * 180.02562 * 14 12 11 16 16 C 1.53003 * 109.47341 * 299.99881 * 15 14 12 17 17 H 1.08997 * 109.47180 * 300.00302 * 16 15 14 18 18 C 1.50699 * 109.47197 * 179.97438 * 16 15 14 19 19 N 1.30641 * 119.25928 * 264.73141 * 18 16 15 20 20 C 1.33517 * 121.50937 * 180.27396 * 19 18 16 21 21 C 1.36204 * 119.90668 * 0.02562 * 20 19 18 22 22 C 1.41021 * 118.59718 * 359.97438 * 21 20 19 23 23 O 1.21977 * 120.71177 * 180.02562 * 22 21 20 24 24 N 1.34754 * 119.25082 * 85.00369 * 18 16 15 25 25 C 1.53003 * 109.46593 * 60.00283 * 16 15 14 26 26 C 1.52999 * 109.47042 * 299.99455 * 25 16 15 27 27 C 1.39655 * 119.68884 * 0.25012 * 8 6 5 28 28 C 1.38075 * 119.85171 * 359.51840 * 27 8 6 29 29 F 1.35097 * 119.91677 * 180.23131 * 28 27 8 30 30 H 0.96698 * 114.00472 * 300.00477 * 1 2 3 31 31 H 1.09007 * 109.47482 * 239.99684 * 2 1 3 32 32 H 1.48504 * 110.00218 * 178.68174 * 3 2 1 33 33 H 1.48499 * 109.99915 * 299.99872 * 3 2 1 34 34 H 1.07998 * 119.92598 * 359.97438 * 5 4 2 35 35 H 0.97005 * 119.99977 * 359.97438 * 11 9 8 36 36 H 1.08997 * 109.47200 * 300.00534 * 14 12 11 37 37 H 1.08997 * 109.46826 * 60.00001 * 14 12 11 38 38 H 1.09001 * 109.47384 * 180.02562 * 15 14 12 39 39 H 1.08997 * 109.47230 * 60.00153 * 15 14 12 40 40 H 1.07993 * 120.04677 * 180.02562 * 20 19 18 41 41 H 1.08003 * 120.70334 * 180.02562 * 21 20 19 42 42 H 0.97001 * 120.04099 * 359.74078 * 24 18 16 43 43 H 1.08997 * 109.47342 * 60.00118 * 25 16 15 44 44 H 1.09007 * 109.47038 * 179.97438 * 25 16 15 45 45 H 1.08999 * 109.46946 * 179.97438 * 26 25 16 46 46 H 1.08997 * 109.47593 * 300.00509 * 26 25 16 47 47 H 1.08007 * 120.07501 * 179.72524 * 27 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.0688 -1.4962 1.9711 6 6 1.5231 -2.1506 3.1017 7 9 0.6787 -2.9180 3.8252 8 6 2.8582 -2.0159 3.4941 9 6 3.3506 -2.7111 4.7006 10 8 2.5944 -3.4020 5.3553 11 7 4.6382 -2.5786 5.0763 12 6 5.1265 -3.2677 6.2733 13 1 4.3371 -3.2948 7.0245 14 6 5.5329 -4.6971 5.9089 15 6 6.0423 -5.4169 7.1591 16 6 7.2539 -4.6696 7.7198 17 1 8.0436 -4.6426 6.9689 18 6 7.7554 -5.3783 8.9516 19 7 7.3553 -4.9746 10.1279 20 6 7.7753 -5.5662 11.2488 21 6 8.6409 -6.6155 11.1795 22 6 9.0729 -7.0516 9.9099 23 8 9.8474 -7.9878 9.8030 24 7 8.6106 -6.4107 8.8150 25 6 6.8476 -3.2403 8.0843 26 6 6.3382 -2.5204 6.8340 27 6 3.7225 -1.2163 2.7432 28 6 3.2566 -0.5727 1.6140 29 9 4.0928 0.1973 0.8840 30 1 -0.3934 0.4417 0.7650 31 1 1.7924 -0.5139 -0.8900 32 1 3.5347 1.7702 0.0321 33 1 1.5616 2.4678 -1.2085 34 1 0.0377 -1.5988 1.6668 35 1 5.2415 -2.0270 4.5541 36 1 4.6696 -5.2296 5.5098 37 1 6.3222 -4.6701 5.1577 38 1 6.3322 -6.4351 6.8994 39 1 5.2527 -5.4439 7.9099 40 1 7.4290 -5.2133 12.2089 41 1 8.9886 -7.1038 12.0780 42 1 8.8941 -6.6929 7.9313 43 1 6.0579 -3.2673 8.8352 44 1 7.7106 -2.7079 8.4842 45 1 6.0483 -1.5023 7.0938 46 1 7.1278 -2.4933 6.0832 47 1 4.7540 -1.1043 3.0432 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_12360598.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:19:45 Heat of formation + Delta-G solvation = -116.893336 kcal Electronic energy + Delta-G solvation = -35788.851351 eV Core-core repulsion = 30574.705899 eV Total energy + Delta-G solvation = -5214.145452 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.138 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -50.40554 -50.05645 -42.89459 -41.44986 -40.22095 -39.48962 -38.48437 -37.62668 -35.90813 -35.22315 -33.35989 -32.29206 -31.77979 -31.39110 -30.13878 -27.87318 -25.87660 -25.38078 -24.17067 -23.87886 -23.69882 -22.59174 -21.66681 -20.98454 -19.78569 -19.54281 -19.10260 -19.05194 -18.52100 -17.88357 -17.76424 -17.46106 -17.27527 -17.08232 -16.91418 -16.68489 -16.09981 -16.03063 -15.89996 -15.73281 -15.71040 -15.62120 -15.32727 -15.12762 -15.01822 -14.50085 -14.43021 -14.16812 -14.06483 -13.96898 -13.68655 -13.44984 -13.23091 -13.13693 -12.94001 -12.53752 -12.44318 -12.34115 -12.11311 -12.02750 -11.60631 -11.53627 -11.38233 -11.32025 -11.09608 -11.03502 -10.97080 -10.24721 -10.10642 -9.68011 -9.66635 -4.98333 -0.73639 -0.45183 -0.24018 0.68156 1.16750 1.52350 1.56227 1.66879 1.91623 2.00729 2.34128 2.50521 2.77824 2.84215 2.88558 3.17385 3.23124 3.41544 3.53949 3.55233 3.62306 3.67023 3.72666 3.86129 3.98378 4.16279 4.17613 4.23778 4.29983 4.35161 4.38264 4.41208 4.43434 4.50483 4.53204 4.63568 4.70095 4.78756 4.81948 4.84820 4.88952 5.02666 5.08822 5.17741 5.23973 5.32225 5.35577 5.39032 5.44961 5.47807 5.56677 6.40227 6.64552 6.66854 6.71269 7.08416 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.073 4.073 3 Si 0.763 3.237 4 C -0.085 4.085 5 C -0.118 4.118 6 C 0.138 3.862 7 F -0.128 7.128 8 C -0.158 4.158 9 C 0.558 3.442 10 O -0.563 6.563 11 N -0.703 5.703 12 C 0.142 3.858 13 H 0.069 0.931 14 C -0.122 4.122 15 C -0.104 4.104 16 C -0.040 4.040 17 H 0.133 0.867 18 C 0.409 3.591 19 N -0.544 5.544 20 C 0.173 3.827 21 C -0.319 4.319 22 C 0.509 3.491 23 O -0.594 6.594 24 N -0.615 5.615 25 C -0.093 4.093 26 C -0.118 4.118 27 C -0.067 4.067 28 C 0.071 3.929 29 F -0.121 7.121 30 H 0.400 0.600 31 H 0.127 0.873 32 H -0.251 1.251 33 H -0.305 1.305 34 H 0.172 0.828 35 H 0.416 0.584 36 H 0.050 0.950 37 H 0.092 0.908 38 H 0.076 0.924 39 H 0.062 0.938 40 H 0.198 0.802 41 H 0.158 0.842 42 H 0.428 0.572 43 H 0.074 0.926 44 H 0.083 0.917 45 H 0.084 0.916 46 H 0.097 0.903 47 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.076 8.561 -2.144 8.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.182 4.182 3 Si 0.667 3.333 4 C -0.087 4.087 5 C -0.137 4.137 6 C 0.117 3.883 7 F -0.107 7.107 8 C -0.162 4.162 9 C 0.345 3.655 10 O -0.442 6.442 11 N -0.355 5.355 12 C 0.038 3.962 13 H 0.087 0.913 14 C -0.160 4.160 15 C -0.143 4.143 16 C -0.060 4.060 17 H 0.151 0.849 18 C 0.145 3.855 19 N -0.267 5.267 20 C 0.034 3.966 21 C -0.344 4.344 22 C 0.309 3.691 23 O -0.477 6.477 24 N -0.253 5.253 25 C -0.131 4.131 26 C -0.155 4.155 27 C -0.086 4.086 28 C 0.052 3.948 29 F -0.100 7.100 30 H 0.251 0.749 31 H 0.144 0.856 32 H -0.176 1.176 33 H -0.233 1.233 34 H 0.189 0.811 35 H 0.255 0.745 36 H 0.069 0.931 37 H 0.111 0.889 38 H 0.095 0.905 39 H 0.081 0.919 40 H 0.215 0.785 41 H 0.176 0.824 42 H 0.269 0.731 43 H 0.093 0.907 44 H 0.101 0.899 45 H 0.103 0.897 46 H 0.116 0.884 47 H 0.202 0.798 Dipole moment (debyes) X Y Z Total from point charges 1.073 8.390 -2.261 8.755 hybrid contribution 0.711 -1.743 -0.627 1.984 sum 1.784 6.647 -2.888 7.464 Atomic orbital electron populations 1.86500 1.16358 1.81834 1.50960 1.25191 0.86009 1.10729 0.96260 0.94282 0.79114 0.73817 0.86112 1.20459 0.92219 0.97758 0.98217 1.20869 1.03002 0.96846 0.92940 1.17978 0.87094 0.92048 0.91188 1.91594 1.69934 1.72585 1.76543 1.19841 0.93408 1.03996 0.98948 1.18070 0.82946 0.80580 0.83912 1.90876 1.56928 1.41039 1.55400 1.45817 1.09640 1.50771 1.29246 1.21124 0.97125 0.91815 0.86128 0.91273 1.21839 1.01499 0.94893 0.97799 1.21490 0.96188 0.99115 0.97532 1.20693 0.99577 0.95650 0.90085 0.84911 1.23746 0.82562 0.82583 0.96634 1.68389 1.29172 1.32258 0.96894 1.23177 0.87460 0.87903 0.98078 1.23003 1.08501 1.05342 0.97520 1.17662 0.81908 0.83141 0.86341 1.90988 1.38551 1.30993 1.87120 1.44636 1.38860 1.28697 1.13064 1.21332 1.02682 0.91525 0.97584 1.21804 0.96236 0.99497 0.98009 1.21310 1.01595 0.93615 0.92080 1.17314 0.87902 0.96540 0.93083 1.91601 1.70918 1.71725 1.75758 0.74911 0.85582 1.17603 1.23334 0.81056 0.74479 0.93142 0.88934 0.90526 0.91889 0.78526 0.82418 0.73091 0.90749 0.89878 0.89715 0.88433 0.79846 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.66 11.63 -148.98 -1.73 0.93 16 2 C -0.07 0.37 2.96 71.24 0.21 0.58 16 3 Si 0.76 -3.90 30.81 68.60 2.11 -1.79 16 4 C -0.08 0.42 5.14 -19.78 -0.10 0.32 16 5 C -0.12 0.40 9.20 22.28 0.20 0.61 16 6 C 0.14 0.19 7.28 22.67 0.17 0.35 16 7 F -0.13 -1.05 15.55 44.97 0.70 -0.35 16 8 C -0.16 0.25 5.88 -20.06 -0.12 0.14 16 9 C 0.56 0.75 7.73 86.74 0.67 1.43 16 10 O -0.56 -6.30 15.00 -3.94 -0.06 -6.36 16 11 N -0.70 4.93 5.03 -445.55 -2.24 2.69 16 12 C 0.14 -0.97 2.45 45.00 0.11 -0.86 16 13 H 0.07 -0.04 7.58 -2.39 -0.02 -0.06 16 14 C -0.12 0.87 5.49 30.59 0.17 1.03 16 15 C -0.10 0.81 5.19 30.59 0.16 0.97 16 16 C -0.04 0.41 2.48 -11.54 -0.03 0.39 16 17 H 0.13 -2.12 8.14 -2.39 -0.02 -2.14 16 18 C 0.41 -1.80 6.73 138.18 0.93 -0.87 16 19 N -0.54 0.96 9.11 -187.56 -1.71 -0.75 16 20 C 0.17 -0.31 11.20 83.96 0.94 0.63 16 21 C -0.32 -0.93 10.07 22.48 0.23 -0.71 16 22 C 0.51 3.60 7.75 84.88 0.66 4.26 16 23 O -0.59 -9.84 17.97 -5.24 -0.09 -9.94 16 24 N -0.62 1.04 5.25 -310.69 -1.63 -0.59 16 25 C -0.09 0.95 4.66 30.60 0.14 1.09 16 26 C -0.12 1.48 5.39 30.60 0.17 1.64 16 27 C -0.07 0.51 9.51 22.57 0.21 0.72 16 28 C 0.07 -0.38 6.65 22.33 0.15 -0.23 16 29 F -0.12 0.40 12.80 44.97 0.58 0.98 16 30 H 0.40 -5.26 8.42 -74.06 -0.62 -5.88 16 31 H 0.13 -0.54 7.96 -2.38 -0.02 -0.56 16 32 H -0.25 0.29 5.27 99.48 0.52 0.81 16 33 H -0.31 -0.96 7.11 99.48 0.71 -0.25 16 34 H 0.17 -0.98 7.06 -2.91 -0.02 -1.00 16 35 H 0.42 -5.91 6.64 -92.70 -0.62 -6.52 16 36 H 0.05 -0.04 8.14 -2.39 -0.02 -0.06 16 37 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 38 H 0.08 -0.64 8.14 -2.39 -0.02 -0.66 16 39 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 40 H 0.20 -1.57 8.06 -2.91 -0.02 -1.60 16 41 H 0.16 0.29 8.06 -2.91 -0.02 0.26 16 42 H 0.43 -2.75 8.78 -92.71 -0.81 -3.57 16 43 H 0.07 -0.47 7.76 -2.39 -0.02 -0.49 16 44 H 0.08 -0.88 8.14 -2.38 -0.02 -0.90 16 45 H 0.08 -1.06 8.14 -2.39 -0.02 -1.08 16 46 H 0.10 -1.65 8.14 -2.39 -0.02 -1.67 16 47 H 0.18 -2.77 6.41 -2.91 -0.02 -2.79 16 Total: 0.00 -32.81 393.15 -0.33 -33.14 By element: Atomic # 1 Polarization: -28.34 SS G_CDS: -1.12 Total: -29.46 kcal Atomic # 6 Polarization: 6.63 SS G_CDS: 4.87 Total: 11.49 kcal Atomic # 7 Polarization: 6.93 SS G_CDS: -5.58 Total: 1.35 kcal Atomic # 8 Polarization: -13.48 SS G_CDS: -1.89 Total: -15.37 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 1.27 Total: 0.63 kcal Atomic # 14 Polarization: -3.90 SS G_CDS: 2.11 Total: -1.79 kcal Total: -32.81 -0.33 -33.14 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_12360598.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.753 kcal (2) G-P(sol) polarization free energy of solvation -32.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.563 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.330 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.141 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.893 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds