Wall clock time and date at job start Sun Mar 7 2021 03:19:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35657 * 116.99883 * 2 1 4 4 C 1.40133 * 120.14955 * 180.27416 * 3 2 1 5 5 C 1.47534 * 120.19508 * 0.02562 * 4 3 2 6 6 O 1.21585 * 119.99762 * 0.27483 * 5 4 3 7 7 N 1.34774 * 120.00111 * 180.27666 * 5 4 3 8 8 C 1.46499 * 120.00205 * 180.02562 * 7 5 4 9 9 H 1.09001 * 109.47249 * 34.99854 * 8 7 5 10 10 C 1.53000 * 109.47264 * 154.99771 * 8 7 5 11 11 C 1.52998 * 109.46942 * 180.02562 * 10 8 7 12 12 C 1.52992 * 109.47380 * 299.99940 * 11 10 8 13 13 H 1.09000 * 109.47304 * 299.99746 * 12 11 10 14 14 C 1.50701 * 109.47511 * 180.02562 * 12 11 10 15 15 N 1.30646 * 119.25088 * 334.72716 * 14 12 11 16 16 C 1.33516 * 121.50613 * 179.75983 * 15 14 12 17 17 C 1.36200 * 119.90968 * 0.51503 * 16 15 14 18 18 C 1.41028 * 118.59294 * 359.74915 * 17 16 15 19 19 O 1.21983 * 120.71095 * 179.97438 * 18 17 16 20 20 N 1.34749 * 119.25676 * 154.99998 * 14 12 11 21 21 C 1.53000 * 109.47034 * 60.00116 * 12 11 10 22 22 C 1.52998 * 109.47100 * 299.99792 * 21 12 11 23 23 C 1.39711 * 119.61507 * 180.29743 * 4 3 2 24 24 C 1.37790 * 119.90971 * 359.72876 * 23 4 3 25 25 C 1.50698 * 119.85549 * 180.02562 * 24 23 4 26 26 O 1.42903 * 109.46543 * 299.97683 * 25 24 23 27 27 Si 1.86293 * 109.47374 * 179.97438 * 25 24 23 28 28 C 1.38555 * 120.29638 * 359.97438 * 24 23 4 29 29 C 1.38056 * 120.39120 * 0.02562 * 28 24 23 30 30 H 1.09002 * 109.47020 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47360 * 299.99357 * 1 2 3 32 32 H 1.08999 * 109.47288 * 59.99687 * 1 2 3 33 33 H 0.97010 * 120.00118 * 0.02562 * 7 5 4 34 34 H 1.09000 * 109.47384 * 300.00279 * 10 8 7 35 35 H 1.09001 * 109.46920 * 59.99881 * 10 8 7 36 36 H 1.09001 * 109.47426 * 60.00172 * 11 10 8 37 37 H 1.09006 * 109.47055 * 180.02562 * 11 10 8 38 38 H 1.08001 * 120.05131 * 180.26267 * 16 15 14 39 39 H 1.07998 * 120.70853 * 179.73612 * 17 16 15 40 40 H 0.96992 * 120.03764 * 359.95706 * 20 14 12 41 41 H 1.09001 * 109.46920 * 60.00290 * 21 12 11 42 42 H 1.09001 * 109.46861 * 179.97438 * 21 12 11 43 43 H 1.08995 * 109.47280 * 299.99894 * 22 21 12 44 44 H 1.09006 * 109.47213 * 179.97438 * 22 21 12 45 45 H 1.08002 * 120.04696 * 179.70491 * 23 4 3 46 46 H 1.08997 * 109.47309 * 59.96942 * 25 24 23 47 47 H 0.96704 * 114.00145 * 299.99607 * 26 25 24 48 48 H 1.48496 * 110.00386 * 58.67420 * 27 25 24 49 49 H 1.48498 * 110.00071 * 180.02562 * 27 25 24 50 50 H 1.07999 * 119.80331 * 180.02562 * 28 24 23 51 51 H 1.08002 * 119.95450 * 179.97438 * 29 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4440 1.2858 -0.0058 5 6 4.2550 0.0533 -0.0125 6 8 3.7095 -1.0333 -0.0181 7 7 5.6004 0.1319 -0.0124 8 6 6.4057 -1.0919 -0.0197 9 1 5.9020 -1.8548 -0.6133 10 6 7.7780 -0.7958 -0.6280 11 6 8.6187 -2.0741 -0.6361 12 6 8.7945 -2.5780 0.7977 13 1 9.2985 -1.8155 1.3916 14 6 9.6231 -3.8367 0.7898 15 7 9.6440 -4.5806 -0.2840 16 6 10.3661 -5.7021 -0.3420 17 6 11.0943 -6.0976 0.7389 18 6 11.0677 -5.2976 1.9000 19 8 11.7050 -5.6156 2.8903 20 7 10.3214 -4.1724 1.8923 21 6 7.4222 -2.8740 1.4061 22 6 6.5815 -1.5958 1.4142 23 6 4.0666 2.5364 0.0006 24 6 3.3036 3.6838 0.0068 25 6 3.9765 5.0322 0.0131 26 8 4.7923 5.1518 1.1803 27 14 2.6823 6.3721 0.0199 28 6 1.9204 3.6033 0.0063 29 6 1.2923 2.3739 0.0000 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5137 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 6.0357 0.9989 -0.0076 34 1 7.6528 -0.4372 -1.6497 35 1 8.2816 -0.0329 -0.0344 36 1 8.1149 -2.8367 -1.2300 37 1 9.5966 -1.8631 -1.0691 38 1 10.3696 -6.2972 -1.2433 39 1 11.6796 -7.0047 0.7076 40 1 10.2879 -3.6064 2.6792 41 1 6.9184 -3.6366 0.8121 42 1 7.5476 -3.2335 2.4274 43 1 7.0854 -0.8333 2.0082 44 1 5.6037 -1.8068 1.8473 45 1 5.1445 2.6039 0.0010 46 1 4.5983 5.1321 -0.8765 47 1 4.3041 5.0727 2.0113 48 1 1.8079 6.2277 1.2114 49 1 3.3331 7.7068 0.0255 50 1 1.3301 4.5077 0.0108 51 1 0.2137 2.3195 0.0001 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_12496546.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:19:51 Heat of formation + Delta-G solvation = -71.029844 kcal Electronic energy + Delta-G solvation = -35444.349428 eV Core-core repulsion = 30696.880906 eV Total energy + Delta-G solvation = -4747.468522 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -42.83674 -41.80341 -40.61074 -39.35870 -39.26413 -38.30482 -37.29319 -35.81008 -35.07891 -33.14245 -32.19149 -31.98725 -31.83803 -30.06211 -28.60994 -26.26723 -26.12349 -25.46252 -24.79568 -23.88831 -23.09320 -22.24648 -21.43387 -20.93722 -19.74246 -19.53698 -19.06362 -18.49949 -18.11070 -17.80394 -17.47415 -16.96828 -16.88229 -16.76717 -16.28670 -16.21825 -15.97092 -15.88905 -15.81387 -15.55960 -15.35317 -15.18078 -14.84191 -14.61010 -14.50536 -14.40305 -14.04010 -14.01296 -13.66514 -13.55611 -13.46801 -13.27727 -13.19450 -12.59766 -12.47242 -12.44114 -12.30939 -12.29281 -12.13727 -12.02347 -11.76863 -11.73415 -11.43414 -11.17902 -11.08631 -10.91321 -10.56807 -10.26192 -10.00255 -9.53966 -9.32094 -5.06400 -0.44560 -0.28489 0.15169 0.81062 1.17729 1.49085 1.58545 1.84532 1.87539 2.09897 2.18755 2.57360 2.69734 2.70479 3.23737 3.28130 3.43378 3.48497 3.54924 3.56516 3.61329 3.63523 3.82184 3.92507 3.99516 4.01857 4.06476 4.15836 4.17047 4.18294 4.22438 4.26102 4.30839 4.32482 4.46466 4.48775 4.53842 4.54597 4.61204 4.63875 4.82130 4.84863 4.88454 4.91015 4.97685 5.01440 5.07434 5.16012 5.19043 5.26999 5.43087 5.45354 5.45692 5.52485 6.25082 6.28628 6.53954 6.72270 6.82031 7.33114 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.562 3.438 6 O -0.514 6.514 7 N -0.728 5.728 8 C 0.146 3.854 9 H 0.094 0.906 10 C -0.129 4.129 11 C -0.095 4.095 12 C -0.046 4.046 13 H 0.101 0.899 14 C 0.404 3.596 15 N -0.533 5.533 16 C 0.157 3.843 17 C -0.294 4.294 18 C 0.520 3.480 19 O -0.538 6.538 20 N -0.627 5.627 21 C -0.108 4.108 22 C -0.127 4.127 23 C -0.020 4.020 24 C -0.167 4.167 25 C -0.068 4.068 26 O -0.530 6.530 27 Si 0.681 3.319 28 C -0.047 4.047 29 C -0.214 4.214 30 H 0.105 0.895 31 H 0.058 0.942 32 H 0.059 0.941 33 H 0.398 0.602 34 H 0.078 0.922 35 H 0.070 0.930 36 H 0.090 0.910 37 H 0.075 0.925 38 H 0.170 0.830 39 H 0.157 0.843 40 H 0.417 0.583 41 H 0.080 0.920 42 H 0.070 0.930 43 H 0.068 0.932 44 H 0.076 0.924 45 H 0.136 0.864 46 H 0.120 0.880 47 H 0.377 0.623 48 H -0.260 1.260 49 H -0.256 1.256 50 H 0.134 0.866 51 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.473 5.892 -3.683 8.264 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.350 3.650 6 O -0.389 6.389 7 N -0.381 5.381 8 C 0.041 3.959 9 H 0.112 0.888 10 C -0.167 4.167 11 C -0.133 4.133 12 C -0.067 4.067 13 H 0.119 0.881 14 C 0.139 3.861 15 N -0.256 5.256 16 C 0.018 3.982 17 C -0.318 4.318 18 C 0.318 3.682 19 O -0.416 6.416 20 N -0.265 5.265 21 C -0.147 4.147 22 C -0.166 4.166 23 C -0.038 4.038 24 C -0.168 4.168 25 C -0.178 4.178 26 O -0.337 6.337 27 Si 0.582 3.418 28 C -0.065 4.065 29 C -0.233 4.233 30 H 0.123 0.877 31 H 0.076 0.924 32 H 0.078 0.922 33 H 0.233 0.767 34 H 0.097 0.903 35 H 0.089 0.911 36 H 0.108 0.892 37 H 0.094 0.906 38 H 0.188 0.812 39 H 0.175 0.825 40 H 0.256 0.744 41 H 0.099 0.901 42 H 0.089 0.911 43 H 0.087 0.913 44 H 0.095 0.905 45 H 0.153 0.847 46 H 0.138 0.862 47 H 0.224 0.776 48 H -0.185 1.185 49 H -0.181 1.181 50 H 0.151 0.849 51 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -4.585 5.346 -3.948 8.074 hybrid contribution 0.804 0.136 2.141 2.291 sum -3.781 5.482 -1.807 6.901 Atomic orbital electron populations 1.23237 0.78180 1.04774 1.01454 1.86382 1.21197 1.25176 1.86151 1.19103 0.90975 0.85060 0.90459 1.19350 0.90892 0.93950 1.13731 1.17936 0.81891 0.88627 0.76560 1.90850 1.71486 1.28542 1.48070 1.45966 1.05866 1.09675 1.76579 1.21009 0.91073 0.87210 0.96577 0.88812 1.21859 0.94336 0.98346 1.02112 1.21364 1.01125 0.97137 0.93722 1.20565 0.94974 0.90325 1.00813 0.88115 1.23218 0.86725 0.94539 0.81653 1.68299 1.25504 1.08399 1.23397 1.22763 0.87140 0.90231 0.98032 1.22971 1.09548 1.05269 0.94042 1.17362 0.79943 0.80656 0.90224 1.91028 1.43900 1.70927 1.35709 1.44772 1.40464 1.24663 1.16637 1.21561 0.92860 0.98989 1.01310 1.21909 1.00859 0.96695 0.97106 1.20965 0.99881 0.89832 0.93169 1.20069 0.93551 0.95922 1.07261 1.24927 1.02512 0.99180 0.91188 1.86596 1.36848 1.94477 1.15757 0.95064 0.79628 0.77631 0.89492 1.20996 0.93752 0.97350 0.94366 1.21237 1.00764 0.91565 1.09718 0.87659 0.92379 0.92219 0.76674 0.90311 0.91115 0.89177 0.90623 0.81239 0.82541 0.74379 0.90127 0.91141 0.91309 0.90482 0.84671 0.86238 0.77569 1.18463 1.18064 0.84869 0.84151 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.28 -0.77 8.57 -40.55 -0.35 -1.12 16 3 C 0.19 0.29 6.70 -38.70 -0.26 0.03 16 4 C -0.18 -0.21 5.89 -104.85 -0.62 -0.82 16 5 C 0.56 1.31 7.73 -12.47 -0.10 1.21 16 6 O -0.51 -3.15 14.82 -16.59 -0.25 -3.40 16 7 N -0.73 0.81 5.03 -54.85 -0.28 0.53 16 8 C 0.15 -0.24 2.45 -67.93 -0.17 -0.41 16 9 H 0.09 0.05 7.58 -51.93 -0.39 -0.34 16 10 C -0.13 0.48 5.39 -26.73 -0.14 0.34 16 11 C -0.09 0.31 4.67 -26.74 -0.12 0.18 16 12 C -0.05 0.16 2.48 -91.78 -0.23 -0.07 16 13 H 0.10 -0.53 8.14 -51.93 -0.42 -0.95 16 14 C 0.40 -0.45 6.73 -155.56 -1.05 -1.50 16 15 N -0.53 -0.03 9.12 -10.63 -0.10 -0.13 16 16 C 0.16 -0.03 11.20 -17.55 -0.20 -0.23 16 17 C -0.29 -0.43 10.07 -39.26 -0.40 -0.83 16 18 C 0.52 1.77 7.75 -15.09 -0.12 1.66 16 19 O -0.54 -4.09 17.97 4.93 0.09 -4.00 16 20 N -0.63 0.14 5.25 -12.27 -0.06 0.08 16 21 C -0.11 0.29 5.19 -26.73 -0.14 0.15 16 22 C -0.13 0.25 5.50 -26.73 -0.15 0.10 16 23 C -0.02 0.02 9.09 -39.20 -0.36 -0.33 16 24 C -0.17 0.28 5.39 -104.67 -0.56 -0.29 16 25 C -0.07 0.15 2.81 36.00 0.10 0.25 16 26 O -0.53 0.46 12.76 -35.23 -0.45 0.01 16 27 Si 0.68 -1.66 29.77 -169.99 -5.06 -6.72 16 28 C -0.05 0.09 8.66 -39.53 -0.34 -0.25 16 29 C -0.21 0.21 9.03 -39.47 -0.36 -0.15 16 30 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 31 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 32 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 33 H 0.40 -1.37 6.63 -40.82 -0.27 -1.65 16 34 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 35 H 0.07 -0.34 8.14 -51.93 -0.42 -0.76 16 36 H 0.09 -0.18 7.76 -51.93 -0.40 -0.58 16 37 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 38 H 0.17 -0.50 8.06 -52.49 -0.42 -0.92 16 39 H 0.16 0.09 8.06 -52.49 -0.42 -0.34 16 40 H 0.42 -1.00 8.78 -40.82 -0.36 -1.36 16 41 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 43 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 44 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 45 H 0.14 -0.42 6.40 -52.49 -0.34 -0.75 16 46 H 0.12 -0.37 7.96 -51.93 -0.41 -0.78 16 47 H 0.38 -1.26 8.70 45.56 0.40 -0.87 16 48 H -0.26 0.12 7.11 56.52 0.40 0.52 16 49 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 50 H 0.13 -0.52 4.85 -52.49 -0.25 -0.77 16 51 H 0.14 -0.43 6.30 -52.49 -0.33 -0.76 16 LS Contribution 413.71 15.07 6.23 6.23 Total: 0.00 -12.61 413.71 -11.43 -24.03 By element: Atomic # 1 Polarization: -8.54 SS G_CDS: -7.01 Total: -15.55 kcal Atomic # 6 Polarization: 4.23 SS G_CDS: -4.20 Total: 0.02 kcal Atomic # 7 Polarization: 0.92 SS G_CDS: -0.44 Total: 0.48 kcal Atomic # 8 Polarization: -7.55 SS G_CDS: -0.95 Total: -8.50 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: -5.06 Total: -6.72 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -12.61 -11.43 -24.03 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_12496546.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.997 kcal (2) G-P(sol) polarization free energy of solvation -12.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.602 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.428 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.033 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.030 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds