Wall clock time and date at job start Sun Mar 7 2021 03:19:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86301 * 109.46674 * 2 1 4 4 C 1.50699 * 109.46964 * 119.99947 * 2 1 3 5 5 C 1.37816 * 119.94180 * 15.28525 * 4 2 1 6 6 C 1.39665 * 119.87460 * 180.27443 * 5 4 2 7 7 C 1.47736 * 120.11750 * 179.71840 * 6 5 4 8 8 O 1.21574 * 119.99534 * 359.72199 * 7 6 5 9 9 N 1.34773 * 120.00096 * 179.45175 * 7 6 5 10 10 C 1.46496 * 119.99975 * 179.97438 * 9 7 6 11 11 H 1.08998 * 109.47549 * 325.00416 * 10 9 7 12 12 C 1.53006 * 109.47004 * 84.99759 * 10 9 7 13 13 C 1.52996 * 109.47252 * 180.02562 * 12 10 9 14 14 C 1.53006 * 109.46988 * 299.99831 * 13 12 10 15 15 H 1.09000 * 109.47314 * 299.99992 * 14 13 12 16 16 C 1.50706 * 109.47064 * 179.97438 * 14 13 12 17 17 N 1.30638 * 119.25441 * 265.00106 * 16 14 13 18 18 C 1.33519 * 121.50548 * 179.97438 * 17 16 14 19 19 C 1.36200 * 119.90627 * 0.02562 * 18 17 16 20 20 C 1.41015 * 118.59588 * 359.97438 * 19 18 17 21 21 O 1.21982 * 120.70747 * 180.02562 * 20 19 18 22 22 N 1.34745 * 119.25175 * 84.73221 * 16 14 13 23 23 C 1.53005 * 109.46656 * 60.00190 * 14 13 12 24 24 C 1.52996 * 109.47267 * 299.99639 * 23 14 13 25 25 C 1.39628 * 119.76615 * 359.44362 * 6 5 4 26 26 C 1.37854 * 119.88114 * 0.27533 * 25 6 5 27 27 C 1.38628 * 120.11768 * 0.02562 * 26 25 6 28 28 F 1.35104 * 119.88366 * 179.97438 * 27 26 25 29 29 H 0.96696 * 113.99990 * 300.00045 * 1 2 3 30 30 H 1.08997 * 109.47274 * 240.00393 * 2 1 3 31 31 H 1.48502 * 109.99872 * 178.68209 * 3 2 1 32 32 H 1.48495 * 110.00315 * 300.00023 * 3 2 1 33 33 H 1.07998 * 120.06158 * 359.97438 * 5 4 2 34 34 H 0.97004 * 120.00022 * 359.97438 * 9 7 6 35 35 H 1.09003 * 109.46845 * 300.00064 * 12 10 9 36 36 H 1.09000 * 109.47106 * 60.00284 * 12 10 9 37 37 H 1.08996 * 109.47402 * 180.02562 * 13 12 10 38 38 H 1.09003 * 109.47580 * 59.99969 * 13 12 10 39 39 H 1.08005 * 120.04463 * 179.97438 * 18 17 16 40 40 H 1.08008 * 120.70074 * 179.97438 * 19 18 17 41 41 H 0.97004 * 120.04390 * 359.97438 * 22 16 14 42 42 H 1.09003 * 109.46514 * 180.02562 * 23 14 13 43 43 H 1.08996 * 109.47353 * 60.00615 * 23 14 13 44 44 H 1.09000 * 109.47086 * 300.00433 * 24 23 14 45 45 H 1.08997 * 109.47381 * 180.02562 * 24 23 14 46 46 H 1.08007 * 120.06040 * 180.25156 * 25 6 5 47 47 H 1.08000 * 119.94369 * 179.97438 * 26 25 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.0745 -1.4993 1.9672 6 6 1.5401 -2.1524 3.1106 7 6 0.6247 -2.9944 3.9079 8 8 -0.5374 -3.1156 3.5718 9 7 1.0791 -3.6325 5.0045 10 6 0.1712 -4.4670 5.7954 11 1 -0.8245 -4.0236 5.7934 12 6 0.1062 -5.8690 5.1861 13 6 -0.8425 -6.7404 6.0117 14 6 -0.3286 -6.8326 7.4499 15 1 0.6670 -7.2764 7.4523 16 6 -1.2634 -7.6905 8.2633 17 7 -2.2074 -7.1198 8.9632 18 6 -3.0604 -7.8362 9.6992 19 6 -2.9557 -9.1938 9.7309 20 6 -1.9368 -9.8100 8.9755 21 8 -1.8083 -11.0230 8.9755 22 7 -1.1100 -9.0291 8.2478 23 6 -0.2637 -5.4306 8.0591 24 6 0.6850 -4.5592 7.2336 25 6 2.8752 -2.0114 3.4943 26 6 3.7252 -1.2246 2.7468 27 6 3.2563 -0.5734 1.6163 28 9 4.0934 0.1970 0.8875 29 1 -0.3933 0.4417 0.7650 30 1 1.7924 -0.5137 -0.8900 31 1 3.5345 1.7704 0.0321 32 1 1.5614 2.4679 -1.2084 33 1 0.0438 -1.6083 1.6638 34 1 2.0074 -3.5392 5.2702 35 1 -0.2603 -5.8033 4.1617 36 1 1.1019 -6.3126 5.1881 37 1 -0.8885 -7.7392 5.5779 38 1 -1.8381 -6.2967 6.0093 39 1 -3.8319 -7.3398 10.2692 40 1 -3.6387 -9.7859 10.3222 41 1 -0.4044 -9.4309 7.7171 42 1 0.1029 -5.4963 9.0836 43 1 -1.2592 -4.9870 8.0569 44 1 1.6806 -5.0030 7.2360 45 1 0.7316 -3.5606 7.6678 46 1 3.2413 -2.5177 4.3753 47 1 4.7579 -1.1145 3.0429 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_12496548.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:19:53 Heat of formation + Delta-G solvation = -76.651540 kcal Electronic energy + Delta-G solvation = -33032.729518 eV Core-core repulsion = 28289.783056 eV Total energy + Delta-G solvation = -4742.946461 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.147 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -50.39361 -42.88407 -41.48268 -40.16956 -39.36178 -38.42956 -37.67144 -35.87263 -35.18292 -33.09417 -32.37286 -31.86055 -31.71233 -29.98482 -27.14457 -26.03812 -25.47837 -24.56882 -23.69363 -23.20722 -22.57871 -21.42414 -20.81535 -19.76200 -19.31909 -19.08765 -18.73595 -18.07197 -17.76982 -17.69270 -17.14265 -17.06223 -16.97701 -16.24362 -16.07259 -15.84661 -15.77371 -15.61366 -15.39267 -15.13322 -15.09504 -14.98203 -14.71284 -14.42089 -14.09014 -14.02418 -13.91866 -13.71116 -13.45277 -13.31291 -13.11837 -12.75452 -12.47490 -12.34700 -12.29670 -12.08609 -12.01148 -11.57212 -11.41995 -11.36919 -11.29587 -11.08520 -11.03035 -10.87772 -10.15851 -9.98253 -9.67238 -9.65639 -5.04059 -0.46269 -0.44062 0.06517 0.69141 1.22118 1.57454 1.61027 1.66645 1.95603 2.08364 2.51562 2.64398 2.79951 3.03103 3.27540 3.36350 3.43430 3.57680 3.66378 3.69076 3.74794 3.75315 4.00345 4.05385 4.12185 4.19053 4.20676 4.31846 4.36987 4.40076 4.43602 4.51976 4.55833 4.62810 4.69208 4.83403 4.87191 4.89993 4.94697 5.03394 5.07534 5.10710 5.14918 5.21443 5.27200 5.35808 5.36788 5.45188 5.49122 5.59280 5.65933 6.53536 6.61882 6.67802 6.72360 7.20734 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.071 4.071 3 Si 0.762 3.238 4 C -0.158 4.158 5 C -0.030 4.030 6 C -0.150 4.150 7 C 0.560 3.440 8 O -0.575 6.575 9 N -0.705 5.705 10 C 0.143 3.857 11 H 0.068 0.932 12 C -0.121 4.121 13 C -0.104 4.104 14 C -0.040 4.040 15 H 0.133 0.867 16 C 0.409 3.591 17 N -0.544 5.544 18 C 0.173 3.827 19 C -0.320 4.320 20 C 0.509 3.491 21 O -0.594 6.594 22 N -0.615 5.615 23 C -0.093 4.093 24 C -0.117 4.117 25 C -0.043 4.043 26 C -0.146 4.146 27 C 0.103 3.897 28 F -0.132 7.132 29 H 0.397 0.603 30 H 0.113 0.887 31 H -0.255 1.255 32 H -0.306 1.306 33 H 0.141 0.859 34 H 0.417 0.583 35 H 0.050 0.950 36 H 0.091 0.909 37 H 0.075 0.925 38 H 0.062 0.938 39 H 0.198 0.802 40 H 0.158 0.842 41 H 0.428 0.572 42 H 0.082 0.918 43 H 0.074 0.926 44 H 0.097 0.903 45 H 0.084 0.916 46 H 0.177 0.823 47 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.277 5.025 5.204 9.578 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.181 4.181 3 Si 0.666 3.334 4 C -0.160 4.160 5 C -0.049 4.049 6 C -0.153 4.153 7 C 0.348 3.652 8 O -0.455 6.455 9 N -0.357 5.357 10 C 0.038 3.962 11 H 0.086 0.914 12 C -0.160 4.160 13 C -0.144 4.144 14 C -0.060 4.060 15 H 0.150 0.850 16 C 0.145 3.855 17 N -0.267 5.267 18 C 0.034 3.966 19 C -0.344 4.344 20 C 0.309 3.691 21 O -0.477 6.477 22 N -0.253 5.253 23 C -0.132 4.132 24 C -0.155 4.155 25 C -0.061 4.061 26 C -0.165 4.165 27 C 0.083 3.917 28 F -0.111 7.111 29 H 0.247 0.753 30 H 0.130 0.870 31 H -0.181 1.181 32 H -0.234 1.234 33 H 0.159 0.841 34 H 0.255 0.745 35 H 0.068 0.932 36 H 0.110 0.890 37 H 0.094 0.906 38 H 0.081 0.919 39 H 0.215 0.785 40 H 0.176 0.824 41 H 0.269 0.731 42 H 0.100 0.900 43 H 0.092 0.908 44 H 0.115 0.885 45 H 0.103 0.897 46 H 0.194 0.806 47 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 5.783 5.305 4.228 8.914 hybrid contribution 0.396 -1.730 -0.831 1.960 sum 6.179 3.575 3.397 7.906 Atomic orbital electron populations 1.86477 1.16812 1.81920 1.50730 1.25059 0.85625 1.10707 0.96661 0.94369 0.78751 0.74451 0.85827 1.20254 0.93046 1.02572 1.00100 1.20895 1.00484 0.91667 0.91871 1.20013 0.95190 1.02256 0.97870 1.18329 0.86786 0.79184 0.80913 1.90813 1.19679 1.64684 1.70370 1.45832 1.15062 1.48334 1.26491 1.21080 0.94006 0.90034 0.91052 0.91364 1.21838 1.00939 0.94655 0.98569 1.21495 0.99716 1.01002 0.92138 1.20697 0.96886 0.95596 0.92809 0.84953 1.23766 0.91690 0.80687 0.89390 1.68391 1.07136 1.37527 1.13643 1.23180 0.93446 0.90445 0.89534 1.22999 1.04291 0.97584 1.09536 1.17661 0.83493 0.86905 0.81004 1.90989 1.74314 1.14873 1.67509 1.44634 1.31373 1.08254 1.40997 1.21334 1.01240 0.91395 0.99182 1.21796 1.00417 1.01745 0.91567 1.21518 0.90385 0.94996 0.99187 1.21407 1.02980 0.98207 0.93873 1.18042 0.87403 0.93750 0.92495 1.91554 1.71270 1.71989 1.76284 0.75286 0.86970 1.18082 1.23411 0.84099 0.74465 0.93155 0.89022 0.90640 0.91906 0.78523 0.82445 0.73094 0.89959 0.90769 0.88482 0.89743 0.80554 0.81216 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.67 11.64 -148.98 -1.73 -2.41 16 2 C -0.07 -0.04 2.96 71.24 0.21 0.18 16 3 Si 0.76 -0.35 30.81 68.60 2.11 1.76 16 4 C -0.16 0.09 5.13 -19.86 -0.10 -0.01 16 5 C -0.03 0.00 8.78 22.51 0.20 0.19 16 6 C -0.15 0.45 5.87 -20.09 -0.12 0.33 16 7 C 0.56 -0.21 7.73 86.75 0.67 0.46 16 8 O -0.58 -5.20 16.01 -3.95 -0.06 -5.26 16 9 N -0.71 5.83 5.03 -445.51 -2.24 3.59 16 10 C 0.14 -1.10 2.45 44.99 0.11 -0.99 16 11 H 0.07 -0.10 7.58 -2.39 -0.02 -0.12 16 12 C -0.12 0.94 5.49 30.59 0.17 1.11 16 13 C -0.10 0.85 5.19 30.59 0.16 1.01 16 14 C -0.04 0.43 2.48 -11.53 -0.03 0.40 16 15 H 0.13 -2.16 8.14 -2.39 -0.02 -2.18 16 16 C 0.41 -1.93 6.73 138.18 0.93 -1.00 16 17 N -0.54 1.13 9.11 -187.55 -1.71 -0.58 16 18 C 0.17 -0.35 11.20 83.96 0.94 0.59 16 19 C -0.32 -0.87 10.07 22.48 0.23 -0.64 16 20 C 0.51 3.49 7.75 84.88 0.66 4.15 16 21 O -0.59 -9.74 17.97 -5.26 -0.09 -9.83 16 22 N -0.62 1.20 5.25 -310.69 -1.63 -0.43 16 23 C -0.09 1.00 4.67 30.59 0.14 1.14 16 24 C -0.12 1.56 5.39 30.59 0.16 1.72 16 25 C -0.04 0.40 9.54 22.51 0.21 0.61 16 26 C -0.15 1.05 10.01 22.27 0.22 1.27 16 27 C 0.10 -0.17 6.67 22.47 0.15 -0.02 16 28 F -0.13 -0.25 12.81 44.97 0.58 0.32 16 29 H 0.40 -2.65 8.44 -74.06 -0.62 -3.28 16 30 H 0.11 0.22 7.96 -2.39 -0.02 0.20 16 31 H -0.26 -0.96 5.27 99.48 0.52 -0.43 16 32 H -0.31 -2.22 7.11 99.48 0.71 -1.51 16 33 H 0.14 0.39 6.67 -2.91 -0.02 0.37 16 34 H 0.42 -6.45 6.63 -92.71 -0.61 -7.06 16 35 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 36 H 0.09 -1.09 8.14 -2.39 -0.02 -1.11 16 37 H 0.07 -0.65 8.14 -2.39 -0.02 -0.67 16 38 H 0.06 -0.26 8.14 -2.39 -0.02 -0.28 16 39 H 0.20 -1.63 8.06 -2.91 -0.02 -1.65 16 40 H 0.16 0.26 8.06 -2.91 -0.02 0.24 16 41 H 0.43 -2.86 8.78 -92.71 -0.81 -3.67 16 42 H 0.08 -0.90 8.14 -2.39 -0.02 -0.92 16 43 H 0.07 -0.50 7.75 -2.39 -0.02 -0.52 16 44 H 0.10 -1.71 8.14 -2.39 -0.02 -1.72 16 45 H 0.08 -1.12 8.14 -2.39 -0.02 -1.14 16 46 H 0.18 -3.14 6.40 -2.91 -0.02 -3.16 16 47 H 0.17 -2.02 8.06 -2.91 -0.02 -2.04 16 Total: 0.00 -32.08 388.66 -1.01 -33.09 By element: Atomic # 1 Polarization: -29.62 SS G_CDS: -1.14 Total: -30.76 kcal Atomic # 6 Polarization: 5.59 SS G_CDS: 4.92 Total: 10.50 kcal Atomic # 7 Polarization: 8.16 SS G_CDS: -5.58 Total: 2.58 kcal Atomic # 8 Polarization: -15.61 SS G_CDS: -1.89 Total: -17.50 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.58 Total: 0.32 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: 2.11 Total: 1.76 kcal Total: -32.08 -1.01 -33.09 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_12496548.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.564 kcal (2) G-P(sol) polarization free energy of solvation -32.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.088 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.652 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds