Wall clock time and date at job start Sun Mar 7 2021 03:20:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86303 * 109.47272 * 2 1 4 4 C 1.50699 * 109.47438 * 119.99830 * 2 1 3 5 5 C 1.38901 * 119.67734 * 244.97809 * 4 2 1 6 6 C 1.36477 * 120.61078 * 179.97438 * 5 4 2 7 7 C 1.40061 * 119.83495 * 0.09211 * 6 5 4 8 8 C 1.41585 * 133.38180 * 179.97438 * 7 6 5 9 9 C 1.35866 * 107.73101 * 179.97438 * 8 7 6 10 10 C 1.47056 * 125.43067 * 180.02562 * 9 8 7 11 11 O 1.21640 * 119.99803 * 0.02562 * 10 9 8 12 12 N 1.34781 * 120.00052 * 180.02562 * 10 9 8 13 13 C 1.46496 * 119.99775 * 179.97438 * 12 10 9 14 14 H 1.08996 * 109.47565 * 34.99894 * 13 12 10 15 15 C 1.52997 * 109.46953 * 154.99854 * 13 12 10 16 16 C 1.53006 * 109.47127 * 179.97438 * 15 13 12 17 17 C 1.52999 * 109.46626 * 299.99539 * 16 15 13 18 18 H 1.08993 * 109.47839 * 299.99931 * 17 16 15 19 19 C 1.50706 * 109.46957 * 180.02562 * 17 16 15 20 20 N 1.30637 * 119.24968 * 335.00073 * 19 17 16 21 21 C 1.33531 * 121.50593 * 179.97438 * 20 19 17 22 22 C 1.36203 * 119.90453 * 0.02562 * 21 20 19 23 23 C 1.41026 * 118.59625 * 0.02562 * 22 21 20 24 24 O 1.21981 * 120.70998 * 180.02562 * 23 22 21 25 25 N 1.34746 * 119.25621 * 154.73028 * 19 17 16 26 26 C 1.52997 * 109.46991 * 60.00378 * 17 16 15 27 27 C 1.52996 * 109.47131 * 299.99311 * 26 17 16 28 28 N 1.38149 * 109.14256 * 0.26005 * 9 8 7 29 29 C 1.37489 * 108.79061 * 359.56643 * 28 9 8 30 30 C 1.37711 * 119.67285 * 64.99481 * 4 2 1 31 31 H 0.96695 * 114.00037 * 59.99572 * 1 2 3 32 32 H 1.09004 * 109.47213 * 239.99901 * 2 1 3 33 33 H 1.48503 * 109.99971 * 298.68146 * 3 2 1 34 34 H 1.48492 * 109.99950 * 59.99974 * 3 2 1 35 35 H 1.07993 * 119.68883 * 359.97438 * 5 4 2 36 36 H 1.08001 * 120.08053 * 180.02562 * 6 5 4 37 37 H 1.08006 * 126.13922 * 359.97438 * 8 7 6 38 38 H 0.97001 * 119.99650 * 359.97438 * 12 10 9 39 39 H 1.09001 * 109.47502 * 60.00124 * 15 13 12 40 40 H 1.09001 * 109.47289 * 299.99920 * 15 13 12 41 41 H 1.08993 * 109.46955 * 60.00011 * 16 15 13 42 42 H 1.09000 * 109.47050 * 179.97438 * 16 15 13 43 43 H 1.07998 * 120.04747 * 179.97438 * 21 20 19 44 44 H 1.07995 * 120.70335 * 180.02562 * 22 21 20 45 45 H 0.97001 * 120.04023 * 359.97438 * 25 19 17 46 46 H 1.09001 * 109.47289 * 179.97438 * 26 17 16 47 47 H 1.09000 * 109.47611 * 59.99933 * 26 17 16 48 48 H 1.08996 * 109.47452 * 300.00000 * 27 26 17 49 49 H 1.09000 * 109.47054 * 180.02562 * 27 26 17 50 50 H 0.96998 * 125.60588 * 179.73505 * 28 9 8 51 51 H 1.08004 * 120.09812 * 359.97438 * 30 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6419 -0.0024 2.1913 6 6 3.1052 -0.6265 3.3131 7 6 2.8654 -1.9938 3.4992 8 6 3.2031 -2.9096 4.5248 9 6 2.7047 -4.1243 4.1755 10 6 2.8321 -5.3575 4.9663 11 8 3.4235 -5.3401 6.0291 12 7 2.2935 -6.5071 4.5136 13 6 2.4209 -7.7358 5.3012 14 1 2.3794 -7.4927 6.3629 15 6 1.2753 -8.6873 4.9507 16 6 1.4087 -9.9708 5.7728 17 6 2.7456 -10.6434 5.4548 18 1 2.7869 -10.8861 4.3931 19 6 2.8768 -11.9079 6.2641 20 7 2.2165 -12.0193 7.3857 21 6 2.2992 -13.1196 8.1379 22 6 3.0866 -14.1570 7.7393 23 6 3.8004 -14.0364 6.5290 24 8 4.5165 -14.9420 6.1352 25 7 3.6683 -12.9002 5.8117 26 6 3.8913 -9.6918 5.8054 27 6 3.7579 -8.4084 4.9833 28 7 2.0637 -4.0174 2.9564 29 6 2.1456 -2.7143 2.5257 30 6 1.6818 -2.0551 1.3909 31 1 -0.3933 0.4417 -0.7650 32 1 1.7923 -0.5139 -0.8900 33 1 1.5879 2.4586 -1.2243 34 1 1.5615 2.4679 1.2084 35 1 2.8293 1.0516 2.0493 36 1 3.6564 -0.0676 4.0550 37 1 3.7574 -2.6833 5.4237 38 1 1.8215 -6.5209 3.6662 39 1 1.3168 -8.9305 3.8889 40 1 0.3227 -8.2080 5.1767 41 1 1.3674 -9.7281 6.8346 42 1 0.5922 -10.6486 5.5234 43 1 1.7433 -13.1864 9.0614 44 1 3.1627 -15.0530 8.3374 45 1 4.1457 -12.7967 4.9736 46 1 4.8438 -10.1710 5.5793 47 1 3.8501 -9.4491 6.8672 48 1 3.7991 -8.6510 3.9215 49 1 4.5743 -7.7306 5.2327 50 1 1.6256 -4.7420 2.4832 51 1 1.1283 -2.5969 0.6382 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_13158378.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:20:27 Heat of formation + Delta-G solvation = -3.520663 kcal Electronic energy + Delta-G solvation = -35110.309657 eV Core-core repulsion = 30362.572554 eV Total energy + Delta-G solvation = -4747.737104 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.168 amu Computer time = 1.66 seconds Orbital eigenvalues (eV) -42.89963 -42.68360 -41.02626 -39.66084 -38.89488 -38.38243 -37.09726 -35.97830 -35.22672 -33.34722 -32.67627 -32.10987 -31.28974 -30.44425 -30.14157 -27.08238 -25.86980 -25.39052 -24.29596 -24.01598 -23.24896 -22.49659 -21.88800 -21.47170 -20.89401 -19.80226 -19.55952 -19.08847 -18.57886 -17.99605 -17.89251 -17.54253 -17.02842 -16.96953 -16.52627 -16.38319 -16.10850 -15.77546 -15.60915 -15.55094 -15.39747 -15.11356 -15.05187 -14.81057 -14.72388 -14.45385 -14.25774 -14.19139 -14.07546 -13.87608 -13.64386 -13.50443 -13.41437 -12.76915 -12.70445 -12.57398 -12.41948 -12.33028 -12.11656 -12.08729 -11.86827 -11.65578 -11.57151 -11.29339 -11.17287 -11.13944 -10.92356 -10.52127 -10.31765 -9.59043 -9.31133 -8.81250 -4.96971 -0.49796 -0.33255 0.53867 0.75980 0.99849 1.25251 1.52682 1.58299 1.74117 1.87176 1.95322 2.24697 2.52036 2.63438 2.73573 3.19838 3.31338 3.33534 3.45339 3.53977 3.57317 3.61189 3.70492 3.83024 3.89650 3.93014 4.02513 4.04132 4.09640 4.16966 4.19300 4.21731 4.29020 4.35490 4.37624 4.46291 4.48064 4.52053 4.58706 4.73521 4.78152 4.81502 4.86729 4.90405 4.93026 4.96781 5.01893 5.12599 5.22167 5.35880 5.39225 5.40537 5.40778 5.55957 5.61709 5.96931 6.17049 6.32572 6.38708 6.66652 6.77257 6.96384 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.076 4.076 3 Si 0.688 3.312 4 C -0.040 4.040 5 C -0.144 4.144 6 C -0.050 4.050 7 C -0.117 4.117 8 C -0.098 4.098 9 C 0.011 3.989 10 C 0.587 3.413 11 O -0.515 6.515 12 N -0.727 5.727 13 C 0.144 3.856 14 H 0.098 0.902 15 C -0.129 4.129 16 C -0.095 4.095 17 C -0.046 4.046 18 H 0.101 0.899 19 C 0.403 3.597 20 N -0.533 5.533 21 C 0.156 3.844 22 C -0.292 4.292 23 C 0.519 3.481 24 O -0.537 6.537 25 N -0.627 5.627 26 C -0.109 4.109 27 C -0.127 4.127 28 N -0.579 5.579 29 C 0.116 3.884 30 C -0.104 4.104 31 H 0.380 0.620 32 H 0.076 0.924 33 H -0.262 1.262 34 H -0.254 1.254 35 H 0.130 0.870 36 H 0.133 0.867 37 H 0.159 0.841 38 H 0.396 0.604 39 H 0.070 0.930 40 H 0.078 0.922 41 H 0.091 0.909 42 H 0.076 0.924 43 H 0.171 0.829 44 H 0.157 0.843 45 H 0.417 0.583 46 H 0.072 0.928 47 H 0.081 0.919 48 H 0.069 0.931 49 H 0.078 0.922 50 H 0.417 0.583 51 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.664 2.932 -4.904 5.951 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.186 4.186 3 Si 0.589 3.411 4 C -0.042 4.042 5 C -0.162 4.162 6 C -0.069 4.069 7 C -0.121 4.121 8 C -0.125 4.125 9 C -0.098 4.098 10 C 0.373 3.627 11 O -0.390 6.390 12 N -0.377 5.377 13 C 0.040 3.960 14 H 0.116 0.884 15 C -0.167 4.167 16 C -0.134 4.134 17 C -0.067 4.067 18 H 0.119 0.881 19 C 0.137 3.863 20 N -0.256 5.256 21 C 0.018 3.982 22 C -0.317 4.317 23 C 0.318 3.682 24 O -0.414 6.414 25 N -0.266 5.266 26 C -0.148 4.148 27 C -0.166 4.166 28 N -0.184 5.184 29 C 0.006 3.994 30 C -0.124 4.124 31 H 0.228 0.772 32 H 0.094 0.906 33 H -0.188 1.188 34 H -0.179 1.179 35 H 0.147 0.853 36 H 0.151 0.849 37 H 0.176 0.824 38 H 0.229 0.771 39 H 0.089 0.911 40 H 0.097 0.903 41 H 0.109 0.891 42 H 0.095 0.905 43 H 0.188 0.812 44 H 0.175 0.825 45 H 0.256 0.744 46 H 0.090 0.910 47 H 0.100 0.900 48 H 0.088 0.912 49 H 0.097 0.903 50 H 0.254 0.746 51 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -1.535 3.138 -3.243 4.766 hybrid contribution -0.948 -1.337 -1.827 2.454 sum -2.483 1.801 -5.069 5.925 Atomic orbital electron populations 1.86598 1.17764 1.80194 1.49805 1.24819 0.84498 1.11181 0.98089 0.94874 0.91679 0.74397 0.80153 1.18917 0.97678 0.92673 0.94953 1.20472 1.01425 0.99699 0.94625 1.20356 0.97671 0.91957 0.96920 1.18222 1.03673 0.94371 0.95872 1.20977 1.01859 0.89926 0.99755 1.20083 1.05049 0.95991 0.88669 1.17187 0.78890 0.81707 0.84894 1.90886 1.41529 1.84998 1.21547 1.45956 1.57969 1.08879 1.24928 1.21107 0.94810 0.82805 0.97304 0.88445 1.21866 0.98403 0.95557 1.00842 1.21364 0.94454 0.95307 1.02256 1.20555 0.98978 0.88920 0.98208 0.88120 1.23179 0.83592 0.88981 0.90499 1.68294 1.25505 1.26386 1.05411 1.22767 0.91619 0.86786 0.97040 1.22981 1.05138 1.04220 0.99348 1.17363 0.83614 0.81356 0.85869 1.91031 1.40779 1.38036 1.71586 1.44771 1.40703 1.16273 1.24812 1.21562 0.96555 0.94592 1.02065 1.21911 0.98067 0.96312 1.00311 1.41864 1.49370 1.08797 1.18341 1.18267 1.00697 0.83898 0.96514 1.19828 1.02490 0.93991 0.96136 0.77234 0.90558 1.18785 1.17857 0.85286 0.84911 0.82385 0.77068 0.91113 0.90287 0.89086 0.90517 0.81208 0.82494 0.74386 0.90959 0.90015 0.91241 0.90308 0.74560 0.85716 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.26 12.80 -35.23 -0.45 -0.71 16 2 C -0.08 0.06 2.78 36.01 0.10 0.16 16 3 Si 0.69 -0.98 29.82 -169.99 -5.07 -6.05 16 4 C -0.04 -0.03 5.39 -104.57 -0.56 -0.59 16 5 C -0.14 -0.04 8.59 -39.97 -0.34 -0.38 16 6 C -0.05 -0.02 10.06 -39.53 -0.40 -0.42 16 7 C -0.12 -0.18 6.16 -106.94 -0.66 -0.84 16 8 C -0.10 -0.15 10.53 -39.16 -0.41 -0.56 16 9 C 0.01 0.01 6.97 -82.29 -0.57 -0.57 16 10 C 0.59 0.42 7.76 -12.68 -0.10 0.32 16 11 O -0.51 -2.23 16.50 5.24 0.09 -2.14 16 12 N -0.73 2.03 5.07 -55.00 -0.28 1.75 16 13 C 0.14 -0.44 2.46 -67.93 -0.17 -0.60 16 14 H 0.10 -0.09 7.58 -51.93 -0.39 -0.48 16 15 C -0.13 0.63 5.39 -26.73 -0.14 0.49 16 16 C -0.10 0.40 4.67 -26.73 -0.12 0.27 16 17 C -0.05 0.20 2.48 -91.77 -0.23 -0.03 16 18 H 0.10 -0.62 8.14 -51.93 -0.42 -1.05 16 19 C 0.40 -0.72 6.73 -155.57 -1.05 -1.76 16 20 N -0.53 0.28 9.11 -10.63 -0.10 0.18 16 21 C 0.16 -0.11 11.20 -17.54 -0.20 -0.30 16 22 C -0.29 -0.30 10.07 -39.26 -0.40 -0.69 16 23 C 0.52 1.51 7.75 -15.09 -0.12 1.39 16 24 O -0.54 -3.82 17.97 4.94 0.09 -3.73 16 25 N -0.63 0.52 5.25 -12.27 -0.06 0.45 16 26 C -0.11 0.41 5.19 -26.73 -0.14 0.27 16 27 C -0.13 0.43 5.49 -26.73 -0.15 0.28 16 28 N -0.58 0.74 6.07 -7.36 -0.04 0.70 16 29 C 0.12 0.10 7.25 -83.97 -0.61 -0.51 16 30 C -0.10 -0.06 9.69 -39.42 -0.38 -0.44 16 31 H 0.38 -1.31 8.74 45.56 0.40 -0.91 16 32 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 33 H -0.26 -0.16 7.11 56.52 0.40 0.25 16 34 H -0.25 -0.44 7.04 56.52 0.40 -0.04 16 35 H 0.13 -0.18 4.81 -52.49 -0.25 -0.43 16 36 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 37 H 0.16 0.13 8.06 -52.48 -0.42 -0.29 16 38 H 0.40 -2.15 7.66 -40.82 -0.31 -2.46 16 39 H 0.07 -0.43 8.14 -51.93 -0.42 -0.85 16 40 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 41 H 0.09 -0.26 7.76 -51.93 -0.40 -0.66 16 42 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 43 H 0.17 -0.57 8.06 -52.49 -0.42 -0.99 16 44 H 0.16 0.02 8.06 -52.49 -0.42 -0.40 16 45 H 0.42 -1.27 8.78 -40.82 -0.36 -1.63 16 46 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 47 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 48 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 49 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 50 H 0.42 -1.89 8.12 -40.82 -0.33 -2.22 16 51 H 0.12 -0.10 8.06 -52.48 -0.42 -0.52 16 LS Contribution 420.18 15.07 6.33 6.33 Total: 0.00 -12.87 420.18 -12.90 -25.77 By element: Atomic # 1 Polarization: -11.26 SS G_CDS: -6.76 Total: -18.02 kcal Atomic # 6 Polarization: 2.12 SS G_CDS: -6.64 Total: -4.52 kcal Atomic # 7 Polarization: 3.57 SS G_CDS: -0.48 Total: 3.08 kcal Atomic # 8 Polarization: -6.32 SS G_CDS: -0.28 Total: -6.59 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.07 Total: -6.05 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -12.87 -12.90 -25.77 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13158378.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.251 kcal (2) G-P(sol) polarization free energy of solvation -12.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.384 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.904 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.771 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.521 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds