Wall clock time and date at job start Sun Mar 7 2021 03:20:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86296 * 109.47026 * 2 1 4 4 C 1.50700 * 109.47338 * 119.99866 * 2 1 3 5 5 C 1.34186 * 126.54239 * 254.97683 * 4 2 1 6 6 N 1.36867 * 109.96604 * 180.02562 * 5 4 2 7 7 C 1.37399 * 109.98368 * 0.02562 * 6 5 4 8 8 C 1.39330 * 133.25256 * 179.97438 * 7 6 5 9 9 C 1.36354 * 120.23669 * 180.02562 * 8 7 6 10 10 C 1.40170 * 120.66835 * 0.02562 * 9 8 7 11 11 C 1.47650 * 119.97230 * 179.97438 * 10 9 8 12 12 O 1.21578 * 120.00007 * 179.97438 * 11 10 9 13 13 N 1.34777 * 119.99891 * 0.02562 * 11 10 9 14 14 C 1.46505 * 119.99797 * 179.97438 * 13 11 10 15 15 H 1.08992 * 109.47276 * 325.00066 * 14 13 11 16 16 C 1.53002 * 109.46958 * 84.99979 * 14 13 11 17 17 C 1.52997 * 109.46978 * 180.02562 * 16 14 13 18 18 C 1.53006 * 109.47164 * 299.99874 * 17 16 14 19 19 H 1.08998 * 109.46505 * 299.99708 * 18 17 16 20 20 C 1.50697 * 109.47239 * 180.02562 * 18 17 16 21 21 N 1.30637 * 119.24910 * 264.72772 * 20 18 17 22 22 C 1.33527 * 121.50526 * 179.76057 * 21 20 18 23 23 C 1.36210 * 119.90488 * 0.50681 * 22 21 20 24 24 C 1.41024 * 118.59434 * 359.75494 * 23 22 21 25 25 O 1.21978 * 120.70797 * 180.02562 * 24 23 22 26 26 N 1.34751 * 119.25623 * 84.99660 * 20 18 17 27 27 C 1.52997 * 109.47127 * 59.99836 * 18 17 16 28 28 C 1.52996 * 109.46998 * 204.99519 * 14 13 11 29 29 C 1.39191 * 120.05320 * 0.24448 * 10 9 8 30 30 C 1.39226 * 119.39389 * 359.50394 * 29 10 9 31 31 H 0.96693 * 113.99910 * 299.99758 * 1 2 3 32 32 H 1.09006 * 109.47529 * 239.99852 * 2 1 3 33 33 H 1.48502 * 110.00239 * 178.68140 * 3 2 1 34 34 H 1.48500 * 110.00256 * 299.99831 * 3 2 1 35 35 H 1.07998 * 125.01397 * 0.04033 * 5 4 2 36 36 H 0.97008 * 125.00515 * 180.02562 * 6 5 4 37 37 H 1.07996 * 119.87616 * 0.02643 * 8 7 6 38 38 H 1.07999 * 119.66336 * 180.02562 * 9 8 7 39 39 H 0.97001 * 120.00457 * 359.97438 * 13 11 10 40 40 H 1.09002 * 109.47097 * 299.99818 * 16 14 13 41 41 H 1.09001 * 109.47142 * 59.99782 * 16 14 13 42 42 H 1.09001 * 109.47375 * 59.99908 * 17 16 14 43 43 H 1.09000 * 109.47140 * 179.97438 * 17 16 14 44 44 H 1.07995 * 120.04792 * 180.26291 * 22 21 20 45 45 H 1.08001 * 120.70281 * 179.73184 * 23 22 21 46 46 H 0.96996 * 120.04209 * 0.02562 * 26 20 18 47 47 H 1.09002 * 109.47153 * 180.02562 * 27 18 17 48 48 H 1.09001 * 109.46832 * 60.00321 * 27 18 17 49 49 H 1.09004 * 109.47368 * 60.00227 * 28 14 13 50 50 H 1.09001 * 109.47372 * 300.00383 * 28 14 13 51 51 H 1.07998 * 120.30187 * 179.74316 * 29 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4612 -0.1387 2.3227 6 7 2.8036 -1.1005 3.2342 7 6 2.4965 -2.3456 2.7408 8 6 2.6362 -3.6352 3.2495 9 6 2.2329 -4.7106 2.5145 10 6 1.6742 -4.5371 1.2407 11 6 1.2433 -5.7125 0.4579 12 8 0.7582 -5.5625 -0.6468 13 7 1.3867 -6.9515 0.9685 14 6 0.9585 -8.1178 0.1920 15 1 0.0701 -7.8633 -0.3858 16 6 2.0817 -8.5381 -0.7581 17 6 1.6344 -9.7557 -1.5695 18 6 1.3109 -10.9107 -0.6196 19 1 2.1993 -11.1656 -0.0418 20 6 0.8708 -12.1102 -1.4188 21 7 -0.4050 -12.3194 -1.6059 22 6 -0.8447 -13.3649 -2.3105 23 6 0.0456 -14.2473 -2.8436 24 6 1.4227 -14.0245 -2.6372 25 8 2.2534 -14.7899 -3.0975 26 7 1.8021 -12.9455 -1.9195 27 6 0.1878 -10.4903 0.3305 28 6 0.6356 -9.2725 1.1422 29 6 1.5306 -3.2580 0.7109 30 6 1.9366 -2.1579 1.4614 31 1 -0.3933 0.4416 0.7650 32 1 1.7924 -0.5139 -0.8900 33 1 3.5345 1.7703 0.0321 34 1 1.5615 2.4679 -1.2085 35 1 2.5971 0.9236 2.4621 36 1 3.2041 -0.9285 4.1009 37 1 3.0654 -3.7834 4.2293 38 1 2.3451 -5.7061 2.9180 39 1 1.7733 -7.0712 1.8500 40 1 2.3119 -7.7155 -1.4351 41 1 2.9703 -8.7926 -0.1803 42 1 0.7460 -9.5008 -2.1474 43 1 2.4344 -10.0549 -2.2467 44 1 -1.9047 -13.5129 -2.4542 45 1 -0.2960 -15.0997 -3.4120 46 1 2.7437 -12.7724 -1.7640 47 1 -0.0424 -11.3130 1.0075 48 1 -0.7006 -10.2355 -0.2474 49 1 -0.1646 -8.9731 1.8192 50 1 1.5241 -9.5270 1.7201 51 1 1.1045 -3.1199 -0.2718 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_13287722.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:20:43 Heat of formation + Delta-G solvation = -6.496066 kcal Electronic energy + Delta-G solvation = -35459.379915 eV Core-core repulsion = 30711.513788 eV Total energy + Delta-G solvation = -4747.866127 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.168 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -42.83806 -42.51251 -41.05681 -39.62346 -38.43276 -37.87398 -37.37486 -35.83930 -35.09503 -33.30049 -32.60589 -31.99239 -31.07244 -30.61337 -29.70333 -26.50284 -26.05179 -25.42134 -24.47234 -23.90020 -23.50009 -22.64466 -21.44980 -21.12082 -20.65935 -19.73081 -19.34056 -19.08469 -18.45888 -17.81286 -17.61183 -17.39109 -16.96741 -16.91296 -16.28991 -16.21285 -15.88454 -15.66642 -15.57453 -15.54429 -15.32191 -15.30559 -15.03551 -14.79068 -14.73151 -14.41237 -14.13968 -14.06702 -14.01998 -13.82179 -13.58243 -13.52859 -13.31443 -12.65549 -12.57461 -12.43672 -12.30433 -12.29864 -12.20357 -12.02319 -11.89339 -11.74114 -11.43875 -11.18053 -11.08729 -10.81470 -10.80093 -10.33795 -10.05791 -9.54077 -9.35266 -8.85774 -5.10025 -0.44614 -0.07374 0.15977 0.81001 1.28994 1.44737 1.58390 1.63399 1.94512 1.98479 1.98820 2.13165 2.57242 2.70557 2.94887 3.28142 3.45134 3.55249 3.55319 3.55869 3.63088 3.71300 3.76241 3.81305 3.85213 4.01312 4.02719 4.05298 4.17147 4.21676 4.26028 4.31753 4.33556 4.39421 4.47942 4.48241 4.54087 4.55413 4.63408 4.75901 4.83450 4.88183 4.90591 4.97407 4.99216 5.04949 5.15400 5.21858 5.26639 5.35559 5.42684 5.45314 5.46001 5.54522 5.57634 5.95221 6.32903 6.54288 6.67918 6.72205 6.81930 7.31851 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.034 4.034 3 Si 0.687 3.313 4 C -0.192 4.192 5 C 0.061 3.939 6 N -0.585 5.585 7 C 0.118 3.882 8 C -0.134 4.134 9 C -0.067 4.067 10 C -0.169 4.169 11 C 0.566 3.434 12 O -0.536 6.536 13 N -0.726 5.726 14 C 0.144 3.856 15 H 0.094 0.906 16 C -0.127 4.127 17 C -0.109 4.109 18 C -0.046 4.046 19 H 0.101 0.899 20 C 0.403 3.597 21 N -0.533 5.533 22 C 0.157 3.843 23 C -0.294 4.294 24 C 0.520 3.480 25 O -0.538 6.538 26 N -0.627 5.627 27 C -0.095 4.095 28 C -0.128 4.128 29 C 0.007 3.993 30 C -0.103 4.103 31 H 0.377 0.623 32 H 0.112 0.888 33 H -0.256 1.256 34 H -0.254 1.254 35 H 0.179 0.821 36 H 0.421 0.579 37 H 0.127 0.873 38 H 0.128 0.872 39 H 0.399 0.601 40 H 0.077 0.923 41 H 0.068 0.932 42 H 0.080 0.920 43 H 0.070 0.930 44 H 0.171 0.829 45 H 0.157 0.843 46 H 0.417 0.583 47 H 0.075 0.925 48 H 0.090 0.910 49 H 0.078 0.922 50 H 0.070 0.930 51 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.059 5.532 9.989 11.467 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.145 4.145 3 Si 0.588 3.412 4 C -0.200 4.200 5 C -0.065 4.065 6 N -0.188 5.188 7 C 0.009 3.991 8 C -0.155 4.155 9 C -0.087 4.087 10 C -0.174 4.174 11 C 0.354 3.646 12 O -0.413 6.413 13 N -0.378 5.378 14 C 0.039 3.961 15 H 0.112 0.888 16 C -0.166 4.166 17 C -0.148 4.148 18 C -0.067 4.067 19 H 0.119 0.881 20 C 0.138 3.862 21 N -0.256 5.256 22 C 0.018 3.982 23 C -0.318 4.318 24 C 0.318 3.682 25 O -0.415 6.415 26 N -0.266 5.266 27 C -0.134 4.134 28 C -0.166 4.166 29 C -0.012 4.012 30 C -0.107 4.107 31 H 0.224 0.776 32 H 0.130 0.870 33 H -0.181 1.181 34 H -0.178 1.178 35 H 0.196 0.804 36 H 0.259 0.741 37 H 0.145 0.855 38 H 0.146 0.854 39 H 0.234 0.766 40 H 0.095 0.905 41 H 0.087 0.913 42 H 0.099 0.901 43 H 0.089 0.911 44 H 0.188 0.812 45 H 0.175 0.825 46 H 0.256 0.744 47 H 0.094 0.906 48 H 0.108 0.892 49 H 0.097 0.903 50 H 0.089 0.911 51 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.005 5.815 8.196 10.100 hybrid contribution 1.503 -1.214 0.441 1.981 sum 2.508 4.602 8.637 10.103 Atomic orbital electron populations 1.86537 1.17252 1.81721 1.48913 1.24405 0.84918 1.08987 0.96240 0.95336 0.80635 0.77199 0.88021 1.20767 1.09241 0.91997 0.97949 1.21684 1.01019 0.94298 0.89502 1.41740 1.54659 1.04151 1.18210 1.18441 0.99865 0.86528 0.94218 1.19667 1.05800 0.88868 1.01132 1.20579 0.96743 0.98318 0.93015 1.19554 1.08255 0.93307 0.96267 1.18175 0.77818 0.82887 0.85716 1.90803 1.44240 1.86049 1.20212 1.45948 1.65065 1.05597 1.21194 1.21031 0.98062 0.84381 0.92589 0.88787 1.21911 0.98421 0.97628 0.98615 1.21566 1.02780 0.93203 0.97222 1.20564 1.00662 0.89661 0.95771 0.88122 1.23215 0.85206 0.89664 0.88076 1.68301 1.11450 1.23353 1.22493 1.22770 1.01268 0.86930 0.87199 1.22975 0.91699 1.06242 1.10905 1.17359 0.91217 0.80447 0.79164 1.91026 1.54694 1.45205 1.50622 1.44772 1.12538 1.23803 1.45441 1.21374 0.97568 0.97270 0.97154 1.21867 1.02400 0.94327 0.98027 1.20705 0.92395 0.89252 0.98881 1.18929 1.04563 0.92958 0.94296 0.77646 0.87020 1.18101 1.17825 0.80446 0.74103 0.85463 0.85415 0.76587 0.90460 0.91288 0.90117 0.91120 0.81229 0.82530 0.74388 0.90618 0.89169 0.90308 0.91131 0.84415 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.47 12.88 -35.23 -0.45 -0.92 16 2 C -0.03 0.00 3.06 36.01 0.11 0.11 16 3 Si 0.69 -1.23 30.76 -169.99 -5.23 -6.46 16 4 C -0.19 -0.02 5.58 -102.69 -0.57 -0.60 16 5 C 0.06 -0.15 10.43 -16.73 -0.17 -0.33 16 6 N -0.59 1.49 6.05 -10.61 -0.06 1.42 16 7 C 0.12 0.00 7.27 -83.95 -0.61 -0.61 16 8 C -0.13 0.17 10.00 -39.85 -0.40 -0.23 16 9 C -0.07 0.08 9.46 -39.54 -0.37 -0.30 16 10 C -0.17 -0.27 5.87 -104.98 -0.62 -0.88 16 11 C 0.57 1.34 7.73 -12.42 -0.10 1.24 16 12 O -0.54 -3.37 15.99 5.30 0.08 -3.28 16 13 N -0.73 0.93 5.03 -54.81 -0.28 0.65 16 14 C 0.14 -0.24 2.45 -67.93 -0.17 -0.41 16 15 H 0.09 0.06 7.58 -51.93 -0.39 -0.33 16 16 C -0.13 0.26 5.49 -26.73 -0.15 0.12 16 17 C -0.11 0.29 5.19 -26.73 -0.14 0.15 16 18 C -0.05 0.16 2.48 -91.77 -0.23 -0.07 16 19 H 0.10 -0.54 8.14 -51.93 -0.42 -0.97 16 20 C 0.40 -0.45 6.73 -155.57 -1.05 -1.50 16 21 N -0.53 -0.05 9.11 -10.63 -0.10 -0.15 16 22 C 0.16 -0.02 11.20 -17.54 -0.20 -0.22 16 23 C -0.29 -0.44 10.07 -39.26 -0.40 -0.84 16 24 C 0.52 1.78 7.75 -15.09 -0.12 1.66 16 25 O -0.54 -4.08 17.97 4.94 0.09 -3.99 16 26 N -0.63 0.15 5.25 -12.27 -0.06 0.08 16 27 C -0.10 0.31 4.67 -26.71 -0.12 0.19 16 28 C -0.13 0.50 5.39 -26.71 -0.14 0.36 16 29 C 0.01 0.02 9.64 -38.86 -0.37 -0.35 16 30 C -0.10 -0.19 6.34 -105.15 -0.67 -0.86 16 31 H 0.38 -1.26 8.70 45.56 0.40 -0.86 16 32 H 0.11 0.14 7.96 -51.93 -0.41 -0.28 16 33 H -0.26 -0.15 7.11 56.52 0.40 0.25 16 34 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 35 H 0.18 -1.09 6.35 -52.49 -0.33 -1.42 16 36 H 0.42 -2.36 8.96 -40.82 -0.37 -2.72 16 37 H 0.13 -0.47 8.06 -52.49 -0.42 -0.90 16 38 H 0.13 -0.55 6.36 -52.49 -0.33 -0.88 16 39 H 0.40 -1.58 6.60 -40.82 -0.27 -1.85 16 40 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 41 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 42 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 43 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 44 H 0.17 -0.49 8.06 -52.49 -0.42 -0.91 16 45 H 0.16 0.09 8.06 -52.49 -0.42 -0.33 16 46 H 0.42 -1.02 8.78 -40.82 -0.36 -1.38 16 47 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 48 H 0.09 -0.17 7.76 -51.93 -0.40 -0.58 16 49 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 50 H 0.07 -0.36 8.14 -51.93 -0.42 -0.79 16 51 H 0.14 0.57 7.64 -52.49 -0.40 0.17 16 LS Contribution 420.08 15.07 6.33 6.33 Total: 0.00 -14.24 420.08 -12.88 -27.12 By element: Atomic # 1 Polarization: -10.72 SS G_CDS: -6.72 Total: -17.45 kcal Atomic # 6 Polarization: 3.12 SS G_CDS: -6.48 Total: -3.36 kcal Atomic # 7 Polarization: 2.51 SS G_CDS: -0.50 Total: 2.01 kcal Atomic # 8 Polarization: -7.91 SS G_CDS: -0.28 Total: -8.19 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.23 Total: -6.46 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -14.24 -12.88 -27.12 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13287722.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.625 kcal (2) G-P(sol) polarization free energy of solvation -14.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.386 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.882 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.121 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds