Wall clock time and date at job start Sun Mar 7 2021 03:20:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86303 * 109.47154 * 2 1 4 4 C 1.50703 * 109.47281 * 240.00537 * 2 1 3 5 5 C 1.38593 * 120.31939 * 299.97722 * 4 2 1 6 6 C 1.38631 * 118.48295 * 179.76678 * 5 4 2 7 7 C 1.39264 * 119.06212 * 0.47897 * 6 5 4 8 8 C 1.48173 * 119.72172 * 179.79296 * 7 6 5 9 9 O 1.21513 * 120.00017 * 359.71966 * 8 7 6 10 10 N 1.34777 * 120.00085 * 179.72436 * 8 7 6 11 11 C 1.46498 * 119.99828 * 180.27625 * 10 8 7 12 12 H 1.08995 * 109.47013 * 324.72129 * 11 10 8 13 13 C 1.52999 * 109.47257 * 84.72116 * 11 10 8 14 14 C 1.53003 * 109.47010 * 179.97438 * 13 11 10 15 15 C 1.52997 * 109.47127 * 300.00125 * 14 13 11 16 16 H 1.08995 * 109.47275 * 299.99879 * 15 14 13 17 17 C 1.50702 * 109.46928 * 180.02562 * 15 14 13 18 18 N 1.30645 * 119.24999 * 264.72637 * 17 15 14 19 19 C 1.33529 * 121.49799 * 179.76290 * 18 17 15 20 20 C 1.36197 * 119.90908 * 0.50714 * 19 18 17 21 21 C 1.41011 * 118.59782 * 359.75705 * 20 19 18 22 22 O 1.21982 * 120.71154 * 180.02562 * 21 20 19 23 23 N 1.34747 * 119.25356 * 85.00138 * 17 15 14 24 24 C 1.52999 * 109.47278 * 60.00039 * 15 14 13 25 25 C 1.52994 * 109.47024 * 299.99839 * 24 15 14 26 26 N 1.32747 * 120.55916 * 359.50810 * 7 6 5 27 27 C 1.31497 * 121.63938 * 0.26298 * 26 7 6 28 28 H 0.96704 * 113.99890 * 59.99554 * 1 2 3 29 29 H 1.09000 * 109.47196 * 120.00337 * 2 1 3 30 30 H 1.48503 * 109.99653 * 60.00264 * 3 2 1 31 31 H 1.48498 * 110.00020 * 181.31661 * 3 2 1 32 32 H 1.07994 * 120.75543 * 0.02562 * 5 4 2 33 33 H 1.08006 * 120.46768 * 180.26800 * 6 5 4 34 34 H 0.97001 * 119.99727 * 359.97438 * 10 8 7 35 35 H 1.08996 * 109.47245 * 299.99926 * 13 11 10 36 36 H 1.08995 * 109.47098 * 60.00065 * 13 11 10 37 37 H 1.08996 * 109.47077 * 179.97438 * 14 13 11 38 38 H 1.09003 * 109.47062 * 60.00488 * 14 13 11 39 39 H 1.08001 * 120.03893 * 180.26808 * 19 18 17 40 40 H 1.08008 * 120.69487 * 179.73426 * 20 19 18 41 41 H 0.96989 * 120.04514 * 359.95466 * 23 17 15 42 42 H 1.08996 * 109.47245 * 179.97438 * 24 15 14 43 43 H 1.09003 * 109.46809 * 59.99699 * 24 15 14 44 44 H 1.08994 * 109.47599 * 300.00048 * 25 24 15 45 45 H 1.08998 * 109.47530 * 179.97438 * 25 24 15 46 46 H 1.07993 * 119.55103 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 1.6011 -2.0372 -1.4563 6 6 2.0798 -2.6518 -2.6030 7 6 2.8800 -1.9216 -3.4782 8 6 3.4034 -2.5654 -4.7058 9 8 3.1382 -3.7273 -4.9429 10 7 4.1737 -1.8623 -5.5595 11 6 4.6862 -2.4971 -6.7763 12 1 4.9141 -3.5431 -6.5719 13 6 3.6300 -2.4114 -7.8799 14 6 4.1655 -3.0738 -9.1509 15 6 5.4368 -2.3535 -9.6046 16 1 5.2086 -1.3075 -9.8086 17 6 5.9639 -3.0056 -10.8568 18 7 6.8920 -3.9199 -10.7583 19 6 7.3877 -4.5299 -11.8377 20 6 6.9322 -4.1943 -13.0766 21 6 5.9343 -3.2038 -13.1834 22 8 5.4982 -2.8738 -14.2738 23 7 5.4713 -2.6286 -12.0529 24 6 6.4930 -2.4392 -8.5009 25 6 5.9575 -1.7768 -7.2301 26 7 3.1731 -0.6519 -3.2247 27 6 2.7286 -0.0431 -2.1473 28 1 -0.3933 0.4418 -0.7650 29 1 1.7924 -0.5139 0.8899 30 1 1.5615 2.4678 1.2086 31 1 3.5346 1.7703 -0.0321 32 1 0.9813 -2.5787 -0.7571 33 1 1.8385 -3.6834 -2.8129 34 1 4.3851 -0.9346 -5.3704 35 1 2.7242 -2.9241 -7.5565 36 1 3.4021 -1.3653 -8.0842 37 1 3.4129 -3.0132 -9.9369 38 1 4.3937 -4.1200 -8.9468 39 1 8.1516 -5.2855 -11.7286 40 1 7.3273 -4.6766 -13.9586 41 1 4.7848 -1.9452 -12.1018 42 1 7.3988 -1.9265 -8.8243 43 1 6.7212 -3.4854 -8.2969 44 1 5.7293 -0.7307 -7.4340 45 1 6.7097 -1.8382 -6.4436 46 1 2.9882 0.9907 -1.9743 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_13287726.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:20:47 Heat of formation + Delta-G solvation = -27.827675 kcal Electronic energy + Delta-G solvation = -30502.692511 eV Core-core repulsion = 26165.891276 eV Total energy + Delta-G solvation = -4336.801235 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.152 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.85701 -41.93834 -40.74711 -39.49943 -38.40137 -37.98288 -35.90847 -35.17728 -33.91700 -33.07227 -32.41528 -32.01520 -30.27650 -27.87399 -25.89280 -25.36380 -25.06838 -23.95435 -23.91934 -22.72713 -21.65015 -21.15596 -19.75789 -19.32333 -18.99795 -18.69842 -17.94130 -17.76917 -17.06165 -16.95383 -16.78519 -16.56229 -16.19549 -16.13024 -15.92715 -15.58274 -15.48967 -15.37268 -15.10088 -14.56382 -14.49182 -14.45336 -14.28091 -14.06884 -14.03199 -13.61718 -13.56529 -13.33295 -12.69557 -12.66350 -12.50189 -12.33890 -12.20256 -12.04733 -11.78809 -11.49508 -11.35334 -11.17559 -11.13595 -11.10627 -10.74078 -10.68507 -10.35419 -10.09300 -9.55814 -5.22680 -0.62272 -0.46360 0.00059 0.79261 1.05142 1.43799 1.56592 1.59729 1.80769 1.93270 2.55440 2.65272 2.67461 2.88630 3.19813 3.25901 3.37332 3.42288 3.51799 3.58215 3.61860 3.68230 3.78500 3.87809 3.97009 3.99689 4.07919 4.13728 4.17376 4.24178 4.25188 4.28915 4.44134 4.47582 4.52126 4.60066 4.74930 4.81803 4.84818 4.87990 4.90890 4.94238 5.00605 5.10488 5.22155 5.29698 5.38951 5.43399 5.44361 6.27356 6.33362 6.57757 6.70272 6.80424 7.09866 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.067 4.067 3 Si 0.688 3.312 4 C -0.150 4.150 5 C -0.053 4.053 6 C -0.108 4.108 7 C 0.079 3.921 8 C 0.574 3.426 9 O -0.527 6.527 10 N -0.708 5.708 11 C 0.141 3.859 12 H 0.095 0.905 13 C -0.127 4.127 14 C -0.108 4.108 15 C -0.047 4.047 16 H 0.102 0.898 17 C 0.403 3.597 18 N -0.533 5.533 19 C 0.156 3.844 20 C -0.293 4.293 21 C 0.520 3.480 22 O -0.537 6.537 23 N -0.627 5.627 24 C -0.095 4.095 25 C -0.128 4.128 26 N -0.453 5.453 27 C 0.103 3.897 28 H 0.381 0.619 29 H 0.121 0.879 30 H -0.249 1.249 31 H -0.252 1.252 32 H 0.148 0.852 33 H 0.153 0.847 34 H 0.412 0.588 35 H 0.077 0.923 36 H 0.070 0.930 37 H 0.071 0.929 38 H 0.080 0.920 39 H 0.170 0.830 40 H 0.157 0.843 41 H 0.418 0.582 42 H 0.076 0.924 43 H 0.089 0.911 44 H 0.072 0.928 45 H 0.079 0.921 46 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.041 4.243 3.986 5.822 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.179 4.179 3 Si 0.589 3.411 4 C -0.153 4.153 5 C -0.079 4.079 6 C -0.128 4.128 7 C -0.059 4.059 8 C 0.358 3.642 9 O -0.403 6.403 10 N -0.358 5.358 11 C 0.037 3.963 12 H 0.113 0.887 13 C -0.166 4.166 14 C -0.147 4.147 15 C -0.067 4.067 16 H 0.120 0.880 17 C 0.138 3.862 18 N -0.256 5.256 19 C 0.018 3.982 20 C -0.318 4.318 21 C 0.318 3.682 22 O -0.415 6.415 23 N -0.265 5.265 24 C -0.134 4.134 25 C -0.166 4.166 26 N -0.164 5.164 27 C -0.057 4.057 28 H 0.229 0.771 29 H 0.138 0.862 30 H -0.174 1.174 31 H -0.177 1.177 32 H 0.166 0.834 33 H 0.170 0.830 34 H 0.248 0.752 35 H 0.095 0.905 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.099 0.901 39 H 0.188 0.812 40 H 0.175 0.825 41 H 0.256 0.744 42 H 0.095 0.905 43 H 0.108 0.892 44 H 0.091 0.909 45 H 0.097 0.903 46 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 1.153 3.853 4.054 5.710 hybrid contribution -0.879 -0.178 -0.017 0.897 sum 0.274 3.675 4.037 5.466 Atomic orbital electron populations 1.86541 1.16591 1.81647 1.49357 1.25055 0.85602 1.10440 0.96769 0.94783 0.81138 0.77229 0.87933 1.21667 0.99125 0.96052 0.98412 1.21564 0.96424 0.93623 0.96287 1.22234 0.95267 1.02095 0.93253 1.21179 0.97914 0.90716 0.96060 1.17849 0.78576 0.85616 0.82133 1.90824 1.58199 1.16054 1.75175 1.45890 1.51260 1.16397 1.22294 1.21116 0.92995 0.98878 0.83302 0.88730 1.21910 0.99104 1.01671 0.93897 1.21560 0.94647 1.00743 0.97785 1.20565 0.97136 0.99511 0.89481 0.88033 1.23207 0.87392 0.88931 0.86639 1.68306 1.13508 1.11600 1.32203 1.22764 0.94290 0.93844 0.87291 1.22971 1.03631 1.04181 1.01008 1.17356 0.84091 0.83440 0.83297 1.91029 1.60745 1.64644 1.25099 1.44769 1.36993 1.37014 1.07759 1.21364 0.96531 1.03608 0.91853 1.21851 0.96540 1.00018 0.98198 1.67512 1.20279 1.09118 1.19451 1.22624 0.94095 0.99685 0.89268 0.77126 0.86182 1.17358 1.17716 0.83449 0.82975 0.75208 0.90472 0.91094 0.91028 0.90118 0.81245 0.82533 0.74365 0.90540 0.89200 0.90913 0.90268 0.81928 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.03 12.78 -35.23 -0.45 0.58 16 2 C -0.07 0.17 2.83 36.01 0.10 0.27 16 3 Si 0.69 -2.23 29.82 -169.99 -5.07 -7.30 16 4 C -0.15 0.28 5.40 -104.36 -0.56 -0.29 16 5 C -0.05 0.07 9.76 -39.31 -0.38 -0.32 16 6 C -0.11 0.00 9.63 -39.06 -0.38 -0.38 16 7 C 0.08 0.06 6.75 -83.01 -0.56 -0.50 16 8 C 0.57 0.84 7.77 -12.18 -0.09 0.74 16 9 O -0.53 -2.30 15.99 5.35 0.09 -2.22 16 10 N -0.71 0.88 5.07 -54.65 -0.28 0.60 16 11 C 0.14 -0.31 2.45 -67.93 -0.17 -0.48 16 12 H 0.09 -0.03 7.58 -51.93 -0.39 -0.42 16 13 C -0.13 0.35 5.49 -26.73 -0.15 0.20 16 14 C -0.11 0.36 5.19 -26.73 -0.14 0.23 16 15 C -0.05 0.18 2.48 -91.77 -0.23 -0.04 16 16 H 0.10 -0.59 8.14 -51.93 -0.42 -1.01 16 17 C 0.40 -0.62 6.73 -155.56 -1.05 -1.66 16 18 N -0.53 0.16 9.11 -10.63 -0.10 0.06 16 19 C 0.16 -0.08 11.20 -17.55 -0.20 -0.27 16 20 C -0.29 -0.35 10.07 -39.27 -0.40 -0.74 16 21 C 0.52 1.60 7.75 -15.10 -0.12 1.48 16 22 O -0.54 -3.92 17.97 4.94 0.09 -3.83 16 23 N -0.63 0.39 5.25 -12.27 -0.06 0.33 16 24 C -0.10 0.35 4.67 -26.73 -0.12 0.22 16 25 C -0.13 0.52 5.39 -26.73 -0.14 0.38 16 26 N -0.45 0.10 9.54 -9.80 -0.09 0.01 16 27 C 0.10 -0.18 9.84 -17.56 -0.17 -0.35 16 28 H 0.38 -2.17 8.70 45.56 0.40 -1.77 16 29 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 30 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 31 H -0.25 0.27 7.11 56.52 0.40 0.67 16 32 H 0.15 -0.36 8.06 -52.49 -0.42 -0.78 16 33 H 0.15 -0.04 7.64 -52.48 -0.40 -0.44 16 34 H 0.41 -1.06 7.93 -40.82 -0.32 -1.39 16 35 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 36 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 37 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 38 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 39 H 0.17 -0.54 8.06 -52.49 -0.42 -0.97 16 40 H 0.16 0.04 8.06 -52.48 -0.42 -0.38 16 41 H 0.42 -1.19 8.78 -40.82 -0.36 -1.55 16 42 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 43 H 0.09 -0.22 7.76 -51.93 -0.40 -0.62 16 44 H 0.07 -0.37 8.14 -51.93 -0.42 -0.79 16 45 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 46 H 0.16 -0.66 4.89 -52.49 -0.26 -0.91 16 LS Contribution 383.71 15.07 5.78 5.78 Total: 0.00 -11.20 383.71 -10.85 -22.05 By element: Atomic # 1 Polarization: -8.55 SS G_CDS: -6.00 Total: -14.55 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: -4.75 Total: -1.51 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -0.53 Total: 1.00 kcal Atomic # 8 Polarization: -5.19 SS G_CDS: -0.28 Total: -5.47 kcal Atomic # 14 Polarization: -2.23 SS G_CDS: -5.07 Total: -7.30 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -11.20 -10.85 -22.05 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13287726.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.782 kcal (2) G-P(sol) polarization free energy of solvation -11.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.978 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.850 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.046 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds