Wall clock time and date at job start Sun Mar 7 2021 03:20:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.34660 * 124.85355 * 2 1 4 4 C 1.36770 * 108.39445 * 179.97438 * 3 2 1 5 5 C 1.47264 * 126.93883 * 179.97438 * 4 3 2 6 6 O 1.21624 * 119.99957 * 179.75127 * 5 4 3 7 7 N 1.34784 * 120.00042 * 0.02562 * 5 4 3 8 8 C 1.46499 * 119.99893 * 179.72668 * 7 5 4 9 9 H 1.08990 * 109.47400 * 34.99963 * 8 7 5 10 10 C 1.52997 * 109.46833 * 155.00334 * 8 7 5 11 11 C 1.53000 * 109.47104 * 179.97438 * 10 8 7 12 12 C 1.53002 * 109.47085 * 299.99889 * 11 10 8 13 13 H 1.09007 * 109.46938 * 299.99813 * 12 11 10 14 14 C 1.50699 * 109.47266 * 180.02562 * 12 11 10 15 15 N 1.30635 * 119.25236 * 334.72244 * 14 12 11 16 16 C 1.33522 * 121.50261 * 179.76353 * 15 14 12 17 17 C 1.36199 * 119.91408 * 0.50803 * 16 15 14 18 18 C 1.41025 * 118.58735 * 359.75727 * 17 16 15 19 19 O 1.21983 * 120.70626 * 179.97438 * 18 17 16 20 20 N 1.34747 * 119.25331 * 154.99952 * 14 12 11 21 21 C 1.53000 * 109.47269 * 59.99579 * 12 11 10 22 22 C 1.52998 * 109.46843 * 274.99901 * 8 7 5 23 23 C 1.46686 * 106.11905 * 0.22395 * 4 3 2 24 24 C 1.34487 * 106.33149 * 359.62625 * 23 4 3 25 25 C 1.50701 * 125.57203 * 180.12852 * 24 23 4 26 26 O 1.42895 * 109.47328 * 150.29250 * 25 24 23 27 27 Si 1.86302 * 109.47056 * 30.28621 * 25 24 23 28 28 H 1.08998 * 109.47602 * 90.02494 * 1 2 3 29 29 H 1.09001 * 109.47243 * 210.02716 * 1 2 3 30 30 H 1.09002 * 109.47345 * 330.02787 * 1 2 3 31 31 H 1.07998 * 125.80160 * 0.02915 * 3 2 1 32 32 H 0.97005 * 119.99846 * 359.72456 * 7 5 4 33 33 H 1.09002 * 109.46979 * 299.99327 * 10 8 7 34 34 H 1.08995 * 109.47843 * 59.99844 * 10 8 7 35 35 H 1.08997 * 109.47552 * 59.99439 * 11 10 8 36 36 H 1.09005 * 109.47655 * 179.97438 * 11 10 8 37 37 H 1.07998 * 120.04372 * 180.26660 * 16 15 14 38 38 H 1.07991 * 120.70869 * 179.72921 * 17 16 15 39 39 H 0.97005 * 120.04428 * 359.97438 * 20 14 12 40 40 H 1.09002 * 109.46537 * 60.00437 * 21 12 11 41 41 H 1.09002 * 109.47190 * 180.02562 * 21 12 11 42 42 H 1.09007 * 109.47248 * 300.00110 * 22 8 7 43 43 H 1.08997 * 109.47450 * 60.00399 * 22 8 7 44 44 H 1.07994 * 126.83206 * 179.77295 * 23 4 3 45 45 H 1.09006 * 109.46508 * 270.29244 * 25 24 23 46 46 H 0.96694 * 113.99943 * 179.97438 * 26 25 24 47 47 H 1.48497 * 110.00058 * 298.68576 * 27 25 24 48 48 H 1.48502 * 109.99444 * 60.00364 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5462 0.7175 0.0006 5 6 4.7284 1.5956 0.0003 6 8 5.8446 1.1126 0.0054 7 7 4.5734 2.9345 -0.0002 8 6 5.7495 3.8080 0.0056 9 1 6.5459 3.3490 -0.5802 10 6 5.3823 5.1617 -0.6054 11 6 6.6103 6.0742 -0.5989 12 6 7.0874 6.2770 0.8407 13 1 6.2907 6.7358 1.4262 14 6 8.2966 7.1763 0.8472 15 7 9.0500 7.2408 -0.2181 16 6 10.1290 8.0259 -0.2631 17 6 10.4700 8.7745 0.8224 18 6 9.6599 8.7009 1.9744 19 8 9.9297 9.3543 2.9685 20 7 8.5795 7.8913 1.9537 21 6 7.4546 4.9232 1.4517 22 6 6.2271 4.0108 1.4449 23 6 3.5375 -0.7493 -0.0046 24 6 2.2447 -1.1198 0.0007 25 6 1.7396 -2.5397 0.0009 26 8 0.4805 -2.5973 0.6741 27 14 2.9645 -3.6343 0.8798 28 1 -0.3634 -0.0004 -1.0276 29 1 -0.3634 -0.8897 0.5143 30 1 -0.3634 0.8902 0.5134 31 1 1.8768 2.1240 0.0004 32 1 3.6832 3.3197 -0.0043 33 1 5.0421 5.0172 -1.6309 34 1 4.5859 5.6208 -0.0197 35 1 7.4071 5.6155 -1.1843 36 1 6.3489 7.0386 -1.0346 37 1 10.7328 8.0644 -1.1577 38 1 11.3425 9.4106 0.8016 39 1 8.0077 7.8245 2.7345 40 1 8.2513 4.4645 0.8662 41 1 7.7940 5.0676 2.4775 42 1 5.4306 4.4698 2.0307 43 1 6.4887 3.0464 1.8802 44 1 4.3980 -1.4018 -0.0090 45 1 1.6183 -2.8823 -1.0267 46 1 0.0950 -3.4833 0.7121 47 1 4.2691 -3.6079 0.1711 48 1 3.1388 -3.1775 2.2821 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_13287730.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:20:49 Heat of formation + Delta-G solvation = -20.035531 kcal Electronic energy + Delta-G solvation = -31338.770853 eV Core-core repulsion = 26974.996032 eV Total energy + Delta-G solvation = -4363.774821 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.91396 -42.51526 -40.81094 -39.49487 -38.44446 -37.69088 -35.85653 -35.15107 -33.83760 -32.68083 -31.84894 -31.56782 -30.04398 -27.58658 -26.38940 -25.74085 -25.31575 -23.86318 -23.68708 -22.38520 -21.34602 -20.85843 -20.22639 -19.78020 -19.17459 -18.60144 -18.33157 -17.82142 -17.23137 -17.10629 -16.91404 -16.66332 -16.07927 -15.87510 -15.64929 -15.60801 -15.46327 -15.25214 -15.10250 -14.98828 -14.66838 -14.45961 -14.09289 -14.01676 -13.75282 -13.50044 -13.32976 -13.30325 -13.17797 -13.08129 -12.65274 -12.51942 -12.34853 -12.13726 -12.04748 -11.96727 -11.61236 -11.40423 -11.33779 -11.10798 -11.02025 -10.62375 -10.13294 -9.68321 -9.67562 -9.26761 -5.03420 -0.47152 0.66228 0.66479 0.93290 1.37684 1.54390 1.64521 1.92072 2.06473 2.22027 2.46834 2.48761 2.76949 3.17287 3.40445 3.55926 3.62957 3.64519 3.70734 3.82865 3.89380 3.98361 4.13749 4.15925 4.27938 4.29679 4.32410 4.35911 4.40648 4.42510 4.48549 4.50220 4.51995 4.64324 4.70389 4.80522 4.84018 4.87466 5.01391 5.05867 5.06730 5.15707 5.21687 5.31223 5.33856 5.43769 5.46251 5.49432 5.59512 5.87982 6.17884 6.62707 6.65160 6.69685 6.83487 7.31157 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.051 3.949 2 N -0.421 5.421 3 C 0.076 3.924 4 C -0.263 4.263 5 C 0.588 3.412 6 O -0.599 6.599 7 N -0.708 5.708 8 C 0.143 3.857 9 H 0.060 0.940 10 C -0.115 4.115 11 C -0.092 4.092 12 C -0.039 4.039 13 H 0.134 0.866 14 C 0.409 3.591 15 N -0.545 5.545 16 C 0.173 3.827 17 C -0.318 4.318 18 C 0.509 3.491 19 O -0.593 6.593 20 N -0.615 5.615 21 C -0.103 4.103 22 C -0.120 4.120 23 C -0.189 4.189 24 C 0.020 3.980 25 C -0.039 4.039 26 O -0.556 6.556 27 Si 0.799 3.201 28 H 0.085 0.915 29 H 0.116 0.884 30 H 0.103 0.897 31 H 0.218 0.782 32 H 0.415 0.585 33 H 0.081 0.919 34 H 0.098 0.902 35 H 0.072 0.928 36 H 0.085 0.915 37 H 0.198 0.802 38 H 0.159 0.841 39 H 0.429 0.571 40 H 0.060 0.940 41 H 0.077 0.923 42 H 0.092 0.908 43 H 0.044 0.956 44 H 0.123 0.877 45 H 0.104 0.896 46 H 0.410 0.590 47 H -0.303 1.303 48 H -0.311 1.311 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.362 -3.139 -3.965 14.287 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 N -0.094 5.094 3 C -0.062 4.062 4 C -0.272 4.272 5 C 0.378 3.622 6 O -0.481 6.481 7 N -0.359 5.359 8 C 0.039 3.961 9 H 0.079 0.921 10 C -0.153 4.153 11 C -0.131 4.131 12 C -0.059 4.059 13 H 0.152 0.848 14 C 0.145 3.855 15 N -0.268 5.268 16 C 0.033 3.967 17 C -0.342 4.342 18 C 0.310 3.690 19 O -0.476 6.476 20 N -0.252 5.252 21 C -0.143 4.143 22 C -0.159 4.159 23 C -0.214 4.214 24 C -0.090 4.090 25 C -0.150 4.150 26 O -0.367 6.367 27 Si 0.706 3.294 28 H 0.104 0.896 29 H 0.134 0.866 30 H 0.122 0.878 31 H 0.234 0.766 32 H 0.252 0.748 33 H 0.100 0.900 34 H 0.116 0.884 35 H 0.090 0.910 36 H 0.103 0.897 37 H 0.215 0.785 38 H 0.177 0.823 39 H 0.269 0.731 40 H 0.079 0.921 41 H 0.095 0.905 42 H 0.110 0.890 43 H 0.062 0.938 44 H 0.141 0.859 45 H 0.122 0.878 46 H 0.263 0.737 47 H -0.232 1.232 48 H -0.240 1.240 Dipole moment (debyes) X Y Z Total from point charges -11.879 -2.855 -3.739 12.777 hybrid contribution 0.579 1.041 0.918 1.504 sum -11.300 -1.814 -2.821 11.787 Atomic orbital electron populations 1.22753 0.73804 1.07274 1.04979 1.43806 1.08548 1.04259 1.52830 1.22524 0.88666 0.93538 1.01425 1.20337 0.92953 0.93136 1.20821 1.17618 0.87426 0.82599 0.74561 1.90750 1.27877 1.76376 1.53077 1.45694 1.10776 1.04344 1.75109 1.21042 0.87700 0.90864 0.96517 0.92135 1.21779 0.98852 0.92180 1.02484 1.21332 0.97590 1.00848 0.93322 1.20666 0.90998 0.92904 1.01303 0.84791 1.23695 0.94291 0.86628 0.80865 1.68391 1.08825 1.25183 1.24396 1.23182 0.90000 0.85372 0.98132 1.23005 1.06207 1.10712 0.94318 1.17662 0.81469 0.79894 0.89996 1.90988 1.72668 1.46938 1.37003 1.44631 1.26137 1.36985 1.17463 1.21478 0.98329 0.93015 1.01437 1.21816 0.98139 0.99067 0.96872 1.21631 0.95142 0.94553 1.10036 1.20122 0.89780 0.89108 1.10009 1.24285 0.94231 0.93641 1.02808 1.86242 1.33782 1.37587 1.79128 0.94929 0.75828 0.83807 0.74788 0.89643 0.86628 0.87826 0.76551 0.74786 0.90029 0.88354 0.90957 0.89677 0.78517 0.82314 0.73071 0.92130 0.90462 0.88950 0.93762 0.85941 0.87825 0.73651 1.23184 1.23956 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.38 10.71 127.77 1.37 0.99 16 2 N -0.42 0.11 3.09 -533.24 -1.65 -1.53 16 3 C 0.08 -0.11 10.83 83.92 0.91 0.80 16 4 C -0.26 -1.92 6.29 -19.04 -0.12 -2.03 16 5 C 0.59 5.47 7.77 86.61 0.67 6.14 16 6 O -0.60 -11.77 16.63 -4.11 -0.07 -11.84 16 7 N -0.71 0.80 5.07 -445.96 -2.26 -1.46 16 8 C 0.14 -0.28 2.46 44.99 0.11 -0.17 16 9 H 0.06 0.31 7.58 -2.39 -0.02 0.29 16 10 C -0.12 1.04 5.39 30.59 0.16 1.20 16 11 C -0.09 0.69 4.67 30.59 0.14 0.83 16 12 C -0.04 0.31 2.48 -11.54 -0.03 0.28 16 13 H 0.13 -1.85 8.14 -2.38 -0.02 -1.87 16 14 C 0.41 -1.04 6.73 138.18 0.93 -0.11 16 15 N -0.54 -0.03 9.12 -187.56 -1.71 -1.74 16 16 C 0.17 -0.06 11.20 83.96 0.94 0.88 16 17 C -0.32 -1.29 10.07 22.48 0.23 -1.06 16 18 C 0.51 4.20 7.75 84.89 0.66 4.86 16 19 O -0.59 -10.41 17.97 -5.26 -0.09 -10.51 16 20 N -0.61 0.14 5.25 -310.69 -1.63 -1.49 16 21 C -0.10 0.47 5.19 30.58 0.16 0.62 16 22 C -0.12 0.33 5.49 30.58 0.17 0.50 16 23 C -0.19 -2.02 9.50 23.62 0.22 -1.79 16 24 C 0.02 0.09 6.17 40.98 0.25 0.34 16 25 C -0.04 0.11 2.97 71.24 0.21 0.32 16 26 O -0.56 3.83 9.69 -148.98 -1.44 2.38 16 27 Si 0.80 -0.55 31.24 68.60 2.14 1.59 16 28 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 29 H 0.12 -0.75 5.13 -2.39 -0.01 -0.76 16 30 H 0.10 -1.23 8.13 -2.39 -0.02 -1.25 16 31 H 0.22 -2.59 7.45 -2.91 -0.02 -2.61 16 32 H 0.41 -3.74 7.55 -92.70 -0.70 -4.44 16 33 H 0.08 -0.71 8.14 -2.39 -0.02 -0.73 16 34 H 0.10 -1.36 8.14 -2.39 -0.02 -1.38 16 35 H 0.07 -0.24 7.76 -2.39 -0.02 -0.26 16 36 H 0.08 -0.72 8.14 -2.38 -0.02 -0.74 16 37 H 0.20 -1.31 8.06 -2.91 -0.02 -1.33 16 38 H 0.16 0.44 8.06 -2.92 -0.02 0.41 16 39 H 0.43 -2.15 8.78 -92.70 -0.81 -2.96 16 40 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 41 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 42 H 0.09 -0.68 8.14 -2.38 -0.02 -0.70 16 43 H 0.04 0.20 8.14 -2.39 -0.02 0.18 16 44 H 0.12 1.78 6.75 -2.91 -0.02 1.76 16 45 H 0.10 -0.72 7.96 -2.38 -0.02 -0.74 16 46 H 0.41 -7.00 8.74 -74.06 -0.65 -7.65 16 47 H -0.30 -2.32 6.89 99.48 0.68 -1.64 16 48 H -0.31 -2.80 7.11 99.48 0.71 -2.09 16 Total: 0.00 -40.96 392.93 -0.84 -41.80 By element: Atomic # 1 Polarization: -28.68 SS G_CDS: -1.12 Total: -29.80 kcal Atomic # 6 Polarization: 5.59 SS G_CDS: 6.99 Total: 12.58 kcal Atomic # 7 Polarization: 1.03 SS G_CDS: -7.25 Total: -6.22 kcal Atomic # 8 Polarization: -18.35 SS G_CDS: -1.61 Total: -19.96 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: 2.14 Total: 1.59 kcal Total: -40.96 -0.84 -41.80 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13287730.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.763 kcal (2) G-P(sol) polarization free energy of solvation -40.960 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.197 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.036 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds