Wall clock time and date at job start Sun Mar 7 2021 03:20:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38970 * 119.95375 * 2 1 4 4 O 1.35710 * 119.91715 * 0.04483 * 3 2 1 5 5 C 1.39027 * 120.17557 * 180.02562 * 3 2 1 6 6 C 1.50694 * 119.95700 * 180.02562 * 5 3 2 7 7 O 1.42901 * 109.46997 * 75.00128 * 6 5 3 8 8 Si 1.86298 * 109.47413 * 195.00594 * 6 5 3 9 9 C 1.37686 * 120.08656 * 0.02819 * 5 3 2 10 10 C 1.39756 * 119.90962 * 359.94886 * 9 5 3 11 11 C 1.47600 * 120.08262 * 180.02562 * 10 9 5 12 12 O 1.21588 * 120.00353 * 359.97438 * 11 10 9 13 13 N 1.34784 * 119.99811 * 180.02562 * 11 10 9 14 14 C 1.46500 * 119.99867 * 180.02562 * 13 11 10 15 15 H 1.09000 * 109.47129 * 34.99704 * 14 13 11 16 16 C 1.53000 * 109.46680 * 154.99709 * 14 13 11 17 17 C 1.53000 * 109.46803 * 180.02562 * 16 14 13 18 18 C 1.53004 * 109.47071 * 299.99719 * 17 16 14 19 19 H 1.09003 * 109.47053 * 300.00548 * 18 17 16 20 20 C 1.50700 * 109.47500 * 180.02562 * 18 17 16 21 21 N 1.30642 * 119.24757 * 335.00072 * 20 18 17 22 22 C 1.33529 * 121.49945 * 179.97438 * 21 20 18 23 23 C 1.36194 * 119.91143 * 359.97438 * 22 21 20 24 24 C 1.41027 * 118.59337 * 0.02562 * 23 22 21 25 25 O 1.21982 * 120.70898 * 180.02562 * 24 23 22 26 26 N 1.34748 * 119.25628 * 154.72638 * 20 18 17 27 27 C 1.53003 * 109.46903 * 60.00122 * 18 17 16 28 28 C 1.53000 * 109.47157 * 299.99826 * 27 18 17 29 29 C 1.37725 * 119.95505 * 180.02562 * 2 1 3 30 30 H 1.08990 * 109.47224 * 269.97376 * 1 2 3 31 31 H 1.09000 * 109.47069 * 29.97903 * 1 2 3 32 32 H 1.09010 * 109.46706 * 149.97622 * 1 2 3 33 33 H 0.96696 * 113.99912 * 89.99339 * 4 3 2 34 34 H 1.09007 * 109.47219 * 315.00337 * 6 5 3 35 35 H 0.96703 * 113.99813 * 179.97438 * 7 6 5 36 36 H 1.48506 * 109.99590 * 300.00272 * 8 6 5 37 37 H 1.48504 * 110.00160 * 61.31285 * 8 6 5 38 38 H 1.07995 * 120.04110 * 180.02562 * 9 5 3 39 39 H 0.97001 * 120.00039 * 359.97438 * 13 11 10 40 40 H 1.09004 * 109.47317 * 299.99041 * 16 14 13 41 41 H 1.08994 * 109.47662 * 59.99803 * 16 14 13 42 42 H 1.08998 * 109.47734 * 59.99460 * 17 16 14 43 43 H 1.09002 * 109.47111 * 180.02562 * 17 16 14 44 44 H 1.08002 * 120.04142 * 179.97438 * 22 21 20 45 45 H 1.07999 * 120.70697 * 179.97438 * 23 22 21 46 46 H 0.96998 * 120.03656 * 0.02562 * 26 20 18 47 47 H 1.08994 * 109.47482 * 60.00213 * 27 18 17 48 48 H 1.08997 * 109.46858 * 180.02562 * 27 18 17 49 49 H 1.08994 * 109.47240 * 300.00535 * 28 27 18 50 50 H 1.08993 * 109.47265 * 179.97438 * 28 27 18 51 51 H 1.08000 * 120.04765 * 359.70052 * 29 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 0.0009 5 6 3.5911 1.2095 -0.0005 6 6 4.3386 2.5180 0.0000 7 8 4.2726 3.1036 1.3019 8 14 6.1196 2.2161 -0.4556 9 6 4.2860 0.0208 -0.0017 10 6 3.5918 -1.1922 -0.0012 11 6 4.3328 -2.4687 -0.0018 12 8 5.5487 -2.4659 -0.0032 13 7 3.6616 -3.6375 -0.0019 14 6 4.3971 -4.9045 -0.0019 15 1 5.3076 -4.7961 0.5875 16 6 3.5224 -6.0019 0.6077 17 6 4.2908 -7.3250 0.6083 18 6 4.6559 -7.7032 -0.8286 19 1 3.7456 -7.8118 -1.4182 20 6 5.4122 -9.0068 -0.8282 21 7 6.0694 -9.3631 0.2432 22 6 6.7540 -10.5085 0.2930 23 6 6.7762 -11.3341 -0.7900 24 6 6.0669 -10.9494 -1.9466 25 8 6.0602 -11.6597 -2.9382 26 7 5.3907 -9.7809 -1.9309 27 6 5.5306 -6.6058 -1.4382 28 6 4.7622 -5.2827 -1.4388 29 6 2.1947 -1.1933 -0.0005 30 1 -0.3633 -0.0005 1.0276 31 1 -0.3633 0.8902 -0.5135 32 1 -0.3633 -0.8899 -0.5143 33 1 1.3228 2.7176 0.8846 34 1 3.8875 3.1944 -0.7260 35 1 4.7339 3.9503 1.3761 36 1 6.7460 1.2952 0.5267 37 1 6.2035 1.6365 -1.8203 38 1 5.3659 0.0258 -0.0017 39 1 2.6916 -3.6398 -0.0011 40 1 3.2627 -5.7327 1.6316 41 1 2.6120 -6.1102 0.0184 42 1 5.2011 -7.2164 1.1979 43 1 3.6675 -8.1069 1.0422 44 1 7.2894 -10.7797 1.1909 45 1 7.3261 -12.2632 -0.7639 46 1 4.8927 -9.4974 -2.7135 47 1 6.4408 -6.4971 -0.8487 48 1 5.7903 -6.8751 -2.4620 49 1 3.8520 -5.3914 -2.0283 50 1 5.3854 -4.5008 -1.8726 51 1 1.6548 -2.1286 0.0039 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_13287732.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:20:54 Heat of formation + Delta-G solvation = -83.887330 kcal Electronic energy + Delta-G solvation = -35183.505424 eV Core-core repulsion = 30435.479360 eV Total energy + Delta-G solvation = -4748.026064 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.87941 -41.79485 -40.79960 -39.59366 -38.44049 -37.79530 -37.53570 -35.94601 -35.21544 -34.17936 -32.86103 -32.10003 -31.76443 -30.05927 -28.15473 -26.90876 -26.08662 -25.46776 -24.50835 -23.97265 -22.70129 -22.04217 -21.52601 -20.95031 -19.76988 -19.56995 -19.14648 -18.64151 -18.44490 -17.98474 -17.78670 -17.03474 -16.89439 -16.70189 -16.25799 -16.08266 -15.88317 -15.60343 -15.49333 -15.38247 -15.33866 -15.07625 -14.93683 -14.47483 -14.47310 -14.15115 -14.07986 -13.93514 -13.71563 -13.60842 -13.55297 -13.39905 -13.03932 -12.96789 -12.68155 -12.65057 -12.50562 -12.37923 -12.07078 -11.94414 -11.82618 -11.55929 -11.52081 -11.22511 -11.13223 -10.99751 -10.37033 -10.23890 -10.05268 -9.71852 -9.57791 -5.00119 -0.48470 -0.44101 -0.00372 0.77248 1.24854 1.54323 1.57155 1.68211 1.93064 1.99788 2.50354 2.53392 2.65410 3.03642 3.19379 3.22803 3.37229 3.47060 3.49519 3.56472 3.59411 3.69309 3.76772 3.87526 3.93546 3.95951 4.08156 4.10218 4.13560 4.21690 4.23927 4.25037 4.34320 4.39776 4.48232 4.49733 4.55466 4.56345 4.59334 4.76427 4.81192 4.83901 4.89700 4.93038 4.95392 5.01775 5.03720 5.07150 5.18154 5.20659 5.33125 5.40563 5.41862 5.46533 6.33638 6.51131 6.52910 6.68119 6.78446 7.08928 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.117 4.117 3 C 0.162 3.838 4 O -0.488 6.488 5 C -0.105 4.105 6 C -0.065 4.065 7 O -0.547 6.547 8 Si 0.678 3.322 9 C -0.053 4.053 10 C -0.140 4.140 11 C 0.563 3.437 12 O -0.532 6.532 13 N -0.723 5.723 14 C 0.143 3.857 15 H 0.095 0.905 16 C -0.128 4.128 17 C -0.095 4.095 18 C -0.046 4.046 19 H 0.101 0.899 20 C 0.403 3.597 21 N -0.533 5.533 22 C 0.156 3.844 23 C -0.293 4.293 24 C 0.520 3.480 25 O -0.537 6.537 26 N -0.627 5.627 27 C -0.108 4.108 28 C -0.128 4.128 29 C -0.066 4.066 30 H 0.074 0.926 31 H 0.078 0.922 32 H 0.071 0.929 33 H 0.400 0.600 34 H 0.081 0.919 35 H 0.385 0.615 36 H -0.245 1.245 37 H -0.253 1.253 38 H 0.139 0.861 39 H 0.400 0.600 40 H 0.079 0.921 41 H 0.071 0.929 42 H 0.090 0.910 43 H 0.076 0.924 44 H 0.171 0.829 45 H 0.157 0.843 46 H 0.417 0.583 47 H 0.080 0.920 48 H 0.071 0.929 49 H 0.070 0.930 50 H 0.076 0.924 51 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.920 5.447 2.975 7.920 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.117 4.117 3 C 0.117 3.883 4 O -0.300 6.300 5 C -0.106 4.106 6 C -0.175 4.175 7 O -0.354 6.354 8 Si 0.579 3.421 9 C -0.072 4.072 10 C -0.143 4.143 11 C 0.350 3.650 12 O -0.409 6.409 13 N -0.374 5.374 14 C 0.038 3.962 15 H 0.113 0.887 16 C -0.166 4.166 17 C -0.134 4.134 18 C -0.067 4.067 19 H 0.119 0.881 20 C 0.138 3.862 21 N -0.256 5.256 22 C 0.018 3.982 23 C -0.317 4.317 24 C 0.318 3.682 25 O -0.415 6.415 26 N -0.265 5.265 27 C -0.147 4.147 28 C -0.166 4.166 29 C -0.084 4.084 30 H 0.093 0.907 31 H 0.097 0.903 32 H 0.090 0.910 33 H 0.258 0.742 34 H 0.099 0.901 35 H 0.233 0.767 36 H -0.170 1.170 37 H -0.177 1.177 38 H 0.156 0.844 39 H 0.236 0.764 40 H 0.097 0.903 41 H 0.090 0.910 42 H 0.108 0.892 43 H 0.095 0.905 44 H 0.188 0.812 45 H 0.175 0.825 46 H 0.256 0.744 47 H 0.099 0.901 48 H 0.090 0.910 49 H 0.088 0.912 50 H 0.095 0.905 51 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -3.539 4.035 2.502 5.922 hybrid contribution -1.207 -0.624 -0.576 1.475 sum -4.746 3.411 1.926 6.154 Atomic orbital electron populations 1.20737 0.89523 1.03856 1.02914 1.20208 0.97397 0.91978 1.02138 1.18263 0.88630 0.85424 0.96032 1.84641 1.75585 1.35655 1.34095 1.19620 0.93187 0.93932 1.03841 1.24532 1.10135 0.93871 0.88999 1.86427 1.79363 1.40829 1.28775 0.95410 0.78010 0.88106 0.80554 1.20987 1.00240 0.90557 0.95383 1.19787 0.93566 0.93309 1.07612 1.18122 0.87221 0.83602 0.76031 1.90817 1.13334 1.87492 1.49226 1.45952 1.10315 1.05402 1.75756 1.21086 0.96312 0.81969 0.96787 0.88688 1.21860 0.98574 0.94079 1.02110 1.21367 1.02030 0.96231 0.93737 1.20560 0.97566 0.87795 1.00744 0.88075 1.23189 0.89764 0.91631 0.81626 1.68301 1.14448 1.19433 1.23411 1.22765 0.90236 0.87205 0.98001 1.22976 1.08929 1.05735 0.94086 1.17361 0.80394 0.80257 0.90179 1.91030 1.63435 1.51576 1.35443 1.44769 1.44450 1.20444 1.16876 1.21561 0.98822 0.92957 1.01409 1.21911 1.00924 0.96903 0.96879 1.21091 0.92418 0.97889 0.97041 0.90740 0.90329 0.91007 0.74166 0.90136 0.76731 1.16962 1.17699 0.84374 0.76445 0.90265 0.91037 0.89152 0.90517 0.81219 0.82504 0.74378 0.90102 0.91021 0.91173 0.90495 0.84844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.26 9.78 36.01 0.35 0.61 16 2 C -0.12 0.01 5.89 -104.54 -0.62 -0.60 16 3 C 0.16 0.20 6.66 -39.02 -0.26 -0.06 16 4 O -0.49 0.00 11.84 -18.83 -0.22 -0.23 16 5 C -0.11 -0.24 5.30 -104.53 -0.55 -0.79 16 6 C -0.06 -0.02 2.36 36.00 0.09 0.07 16 7 O -0.55 0.26 12.86 -35.23 -0.45 -0.19 16 8 Si 0.68 -0.01 30.19 -169.99 -5.13 -5.14 16 9 C -0.05 -0.18 8.20 -39.22 -0.32 -0.50 16 10 C -0.14 -0.27 5.87 -104.96 -0.62 -0.89 16 11 C 0.56 1.37 7.73 -12.44 -0.10 1.27 16 12 O -0.53 -3.34 16.00 5.29 0.08 -3.25 16 13 N -0.72 1.01 5.03 -54.82 -0.28 0.74 16 14 C 0.14 -0.27 2.45 -67.93 -0.17 -0.44 16 15 H 0.10 0.03 7.58 -51.93 -0.39 -0.36 16 16 C -0.13 0.53 5.39 -26.73 -0.14 0.39 16 17 C -0.10 0.34 4.67 -26.73 -0.12 0.21 16 18 C -0.05 0.17 2.48 -91.77 -0.23 -0.05 16 19 H 0.10 -0.57 8.14 -51.93 -0.42 -0.99 16 20 C 0.40 -0.54 6.73 -155.56 -1.05 -1.59 16 21 N -0.53 0.06 9.12 -10.63 -0.10 -0.03 16 22 C 0.16 -0.05 11.20 -17.55 -0.20 -0.25 16 23 C -0.29 -0.39 10.07 -39.26 -0.40 -0.78 16 24 C 0.52 1.68 7.75 -15.09 -0.12 1.56 16 25 O -0.54 -3.99 17.97 4.93 0.09 -3.91 16 26 N -0.63 0.28 5.25 -12.27 -0.06 0.21 16 27 C -0.11 0.32 5.19 -26.73 -0.14 0.18 16 28 C -0.13 0.29 5.50 -26.73 -0.15 0.14 16 29 C -0.07 0.04 9.18 -39.22 -0.36 -0.32 16 30 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 31 H 0.08 -0.13 7.52 -51.93 -0.39 -0.52 16 32 H 0.07 -0.24 8.08 -51.92 -0.42 -0.66 16 33 H 0.40 -1.36 9.06 45.56 0.41 -0.94 16 34 H 0.08 -0.05 7.82 -51.93 -0.41 -0.46 16 35 H 0.38 -2.01 8.74 45.56 0.40 -1.61 16 36 H -0.24 -0.83 6.75 56.52 0.38 -0.45 16 37 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 38 H 0.14 0.64 4.47 -52.49 -0.23 0.40 16 39 H 0.40 -1.66 6.62 -40.82 -0.27 -1.93 16 40 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 41 H 0.07 -0.39 8.14 -51.93 -0.42 -0.81 16 42 H 0.09 -0.20 7.76 -51.93 -0.40 -0.60 16 43 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 44 H 0.17 -0.52 8.06 -52.49 -0.42 -0.94 16 45 H 0.16 0.06 8.06 -52.49 -0.42 -0.36 16 46 H 0.42 -1.10 8.78 -40.82 -0.36 -1.46 16 47 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 48 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 49 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 50 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 51 H 0.13 -0.54 6.39 -52.49 -0.34 -0.87 16 LS Contribution 416.74 15.07 6.28 6.28 Total: 0.00 -13.50 416.74 -11.15 -24.65 By element: Atomic # 1 Polarization: -11.03 SS G_CDS: -6.27 Total: -17.30 kcal Atomic # 6 Polarization: 3.26 SS G_CDS: -5.09 Total: -1.83 kcal Atomic # 7 Polarization: 1.35 SS G_CDS: -0.44 Total: 0.92 kcal Atomic # 8 Polarization: -7.08 SS G_CDS: -0.50 Total: -7.58 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: -5.13 Total: -5.14 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -13.50 -11.15 -24.65 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13287732.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.235 kcal (2) G-P(sol) polarization free energy of solvation -13.500 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.152 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.652 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.887 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds