Wall clock time and date at job start Sun Mar 7 2021 03:21:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.36412 * 125.79947 * 2 1 4 4 C 1.47383 * 127.19666 * 359.95582 * 3 2 1 5 5 O 1.21618 * 119.99378 * 0.02562 * 4 3 2 6 6 N 1.34776 * 120.00239 * 180.02562 * 4 3 2 7 7 C 1.46500 * 119.99967 * 180.02562 * 6 4 3 8 8 H 1.09001 * 109.46860 * 325.00152 * 7 6 4 9 9 C 1.52999 * 109.47063 * 84.99801 * 7 6 4 10 10 C 1.53001 * 109.47037 * 180.02562 * 9 7 6 11 11 C 1.52997 * 109.47050 * 300.00274 * 10 9 7 12 12 H 1.09001 * 109.47303 * 299.99821 * 11 10 9 13 13 C 1.50709 * 109.47006 * 179.97438 * 11 10 9 14 14 N 1.30633 * 119.25362 * 264.99952 * 13 11 10 15 15 C 1.33522 * 121.50654 * 179.97438 * 14 13 11 16 16 C 1.36200 * 119.90547 * 359.97438 * 15 14 13 17 17 C 1.41020 * 118.59860 * 359.97438 * 16 15 14 18 18 O 1.21980 * 120.71367 * 180.02562 * 17 16 15 19 19 N 1.34749 * 119.25076 * 84.73135 * 13 11 10 20 20 C 1.52999 * 109.47425 * 59.99963 * 11 10 9 21 21 C 1.52997 * 109.47085 * 205.00113 * 7 6 4 22 22 C 1.47028 * 105.61442 * 179.87221 * 3 2 1 23 23 C 1.34177 * 105.94960 * 0.38706 * 22 3 2 24 24 C 1.50698 * 125.43189 * 179.80178 * 23 22 3 25 25 O 1.42904 * 109.46833 * 299.97875 * 24 23 22 26 26 Si 1.86302 * 109.46945 * 179.97438 * 24 23 22 27 27 O 1.33654 * 125.80119 * 180.30820 * 2 1 3 28 28 H 1.09002 * 109.47152 * 179.71857 * 1 2 3 29 29 H 1.09001 * 109.46980 * 59.71957 * 1 2 3 30 30 H 1.09004 * 109.47113 * 299.71938 * 1 2 3 31 31 H 0.96993 * 119.99707 * 0.02562 * 6 4 3 32 32 H 1.08998 * 109.47396 * 299.99978 * 9 7 6 33 33 H 1.08997 * 109.47465 * 60.00394 * 9 7 6 34 34 H 1.08998 * 109.47445 * 180.02562 * 10 9 7 35 35 H 1.09008 * 109.47404 * 59.99871 * 10 9 7 36 36 H 1.07997 * 120.04734 * 179.97438 * 15 14 13 37 37 H 1.08005 * 120.70416 * 180.02562 * 16 15 14 38 38 H 0.96995 * 120.04441 * 359.97438 * 19 13 11 39 39 H 1.08998 * 109.47396 * 180.02562 * 20 11 10 40 40 H 1.09001 * 109.46996 * 59.99671 * 20 11 10 41 41 H 1.08997 * 109.47035 * 299.99357 * 21 7 6 42 42 H 1.08998 * 109.46940 * 59.99706 * 21 7 6 43 43 H 1.08004 * 127.01951 * 180.17313 * 22 3 2 44 44 H 1.08999 * 109.47852 * 59.98118 * 24 23 22 45 45 H 0.96701 * 113.99806 * 180.02562 * 25 24 23 46 46 H 1.48501 * 109.99976 * 298.68000 * 26 24 23 47 47 H 1.48500 * 109.99969 * 59.99760 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5158 -0.0009 5 8 0.6889 2.7892 -0.0013 6 7 2.7930 3.5016 -0.0013 7 6 2.3645 4.9025 -0.0016 8 1 1.4532 5.0035 -0.5910 9 6 2.0953 5.3538 1.4353 10 6 1.6472 6.8167 1.4349 11 6 2.7477 7.6870 0.8246 12 1 3.6591 7.5864 1.4139 13 6 2.3060 9.1279 0.8237 14 7 1.7462 9.6233 -0.2477 15 6 1.3376 10.8935 -0.2977 16 6 1.5012 11.7026 0.7856 17 6 2.1045 11.1678 1.9426 18 8 2.2696 11.8578 2.9349 19 7 2.4925 9.8745 1.9298 20 6 3.0169 7.2357 -0.6123 21 6 3.4655 5.7724 -0.6117 22 6 3.6850 0.5991 0.0032 23 6 3.5859 -0.7390 -0.0040 24 6 4.7459 -1.7009 -0.0083 25 8 5.5431 -1.4805 -1.1737 26 14 4.1027 -3.4494 -0.0172 27 8 2.2889 -1.0840 -0.0058 28 1 -0.3633 -1.0277 -0.0050 29 1 -0.3633 0.5182 -0.8875 30 1 -0.3633 0.5095 0.8925 31 1 3.7381 3.2835 -0.0014 32 1 1.3110 4.7341 1.8699 33 1 3.0066 5.2528 2.0247 34 1 1.4558 7.1384 2.4586 35 1 0.7357 6.9174 0.8455 36 1 0.8780 11.2787 -1.1958 37 1 1.1751 12.7319 0.7595 38 1 2.9066 9.4840 2.7152 39 1 3.8012 7.8554 -1.0469 40 1 2.1054 7.3363 -1.2015 41 1 4.3767 5.6714 -0.0223 42 1 3.6572 5.4508 -1.6353 43 1 4.5928 1.1841 0.0066 44 1 5.3532 -1.5419 0.8828 45 1 6.3093 -2.0664 -1.2426 46 1 3.2983 -3.7009 1.2055 47 1 3.2730 -3.6792 -1.2271 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_13308374.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:21:06 Heat of formation + Delta-G solvation = -57.094483 kcal Electronic energy + Delta-G solvation = -31588.169596 eV Core-core repulsion = 27125.069117 eV Total energy + Delta-G solvation = -4463.100480 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -43.88495 -42.90309 -40.97273 -39.56373 -38.47651 -37.87956 -35.88372 -35.19705 -34.28275 -33.31021 -32.46477 -31.80539 -30.31904 -29.35283 -26.32070 -25.64024 -25.26216 -24.18850 -23.73018 -22.83969 -21.79606 -21.29444 -20.39020 -19.76844 -19.15839 -18.71932 -18.39080 -17.82437 -17.41226 -17.32372 -17.10082 -17.03080 -16.18029 -15.93787 -15.78597 -15.73940 -15.62868 -15.26348 -15.11935 -14.79200 -14.45509 -14.31759 -14.27347 -14.16914 -14.05319 -13.97870 -13.92366 -13.43305 -13.17499 -13.14210 -12.63617 -12.51018 -12.34798 -12.20846 -12.13220 -12.04195 -11.61277 -11.40285 -11.34270 -11.12859 -11.07795 -11.00546 -10.47744 -10.10722 -9.67421 -9.63474 -5.08759 -0.46111 0.12285 0.67366 0.75462 1.17864 1.41987 1.55354 1.64143 2.01493 2.11317 2.20946 2.49714 2.77384 3.16948 3.40691 3.55352 3.62530 3.64101 3.66990 3.71068 3.72485 3.97646 4.05922 4.15261 4.16759 4.26153 4.28736 4.34713 4.38497 4.41422 4.46909 4.49447 4.51257 4.56346 4.62640 4.70550 4.81929 4.88098 4.99598 5.01749 5.06589 5.14701 5.16418 5.21638 5.30795 5.34683 5.41365 5.46869 5.55753 5.80191 6.49216 6.66164 6.70515 6.85514 7.15793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 C 0.070 3.930 3 C -0.262 4.262 4 C 0.590 3.410 5 O -0.572 6.572 6 N -0.705 5.705 7 C 0.144 3.856 8 H 0.068 0.932 9 C -0.120 4.120 10 C -0.103 4.103 11 C -0.040 4.040 12 H 0.133 0.867 13 C 0.410 3.590 14 N -0.545 5.545 15 C 0.173 3.827 16 C -0.318 4.318 17 C 0.509 3.491 18 O -0.593 6.593 19 N -0.615 5.615 20 C -0.091 4.091 21 C -0.118 4.118 22 C -0.137 4.137 23 C -0.040 4.040 24 C -0.032 4.032 25 O -0.558 6.558 26 Si 0.801 3.199 27 O -0.194 6.194 28 H 0.089 0.911 29 H 0.096 0.904 30 H 0.099 0.901 31 H 0.414 0.586 32 H 0.051 0.949 33 H 0.089 0.911 34 H 0.078 0.922 35 H 0.063 0.937 36 H 0.198 0.802 37 H 0.159 0.841 38 H 0.429 0.571 39 H 0.082 0.918 40 H 0.074 0.926 41 H 0.095 0.905 42 H 0.079 0.921 43 H 0.189 0.811 44 H 0.131 0.869 45 H 0.414 0.586 46 H -0.296 1.296 47 H -0.311 1.311 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.391 -6.479 -1.488 10.705 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C 0.017 3.983 3 C -0.267 4.267 4 C 0.379 3.621 5 O -0.453 6.453 6 N -0.356 5.356 7 C 0.040 3.960 8 H 0.086 0.914 9 C -0.158 4.158 10 C -0.142 4.142 11 C -0.060 4.060 12 H 0.150 0.850 13 C 0.145 3.855 14 N -0.268 5.268 15 C 0.033 3.967 16 C -0.343 4.343 17 C 0.310 3.690 18 O -0.476 6.476 19 N -0.252 5.252 20 C -0.130 4.130 21 C -0.156 4.156 22 C -0.156 4.156 23 C -0.087 4.087 24 C -0.142 4.142 25 O -0.370 6.370 26 Si 0.708 3.292 27 O -0.093 6.093 28 H 0.107 0.893 29 H 0.115 0.885 30 H 0.117 0.883 31 H 0.251 0.749 32 H 0.070 0.930 33 H 0.108 0.892 34 H 0.096 0.904 35 H 0.082 0.918 36 H 0.215 0.785 37 H 0.176 0.824 38 H 0.269 0.731 39 H 0.101 0.899 40 H 0.093 0.907 41 H 0.113 0.887 42 H 0.097 0.903 43 H 0.206 0.794 44 H 0.148 0.852 45 H 0.268 0.732 46 H -0.224 1.224 47 H -0.240 1.240 Dipole moment (debyes) X Y Z Total from point charges 6.216 -6.417 -1.844 9.122 hybrid contribution 0.025 1.112 1.102 1.566 sum 6.241 -5.305 -0.741 8.224 Atomic orbital electron populations 1.20562 0.82629 1.04572 1.05279 1.23299 0.94869 0.83157 0.96940 1.21340 0.94111 0.93785 1.17421 1.17246 0.85379 0.84119 0.75389 1.90782 1.17975 1.84500 1.52072 1.45731 1.09966 1.05550 1.74370 1.21098 0.98939 0.79142 0.96869 0.91388 1.21821 1.02491 0.94935 0.96570 1.21491 0.97388 0.93805 1.01530 1.20675 1.00752 0.83311 1.01236 0.84964 1.23700 0.86177 0.94725 0.80858 1.68388 1.18936 1.15293 1.24156 1.23178 0.88041 0.87253 0.98186 1.23004 1.12066 1.04921 0.94293 1.17658 0.80145 0.81172 0.90040 1.90988 1.59898 1.59425 1.37290 1.44628 1.51046 1.12261 1.17287 1.21328 1.03312 0.94883 0.93474 1.21800 0.97805 0.93578 1.02389 1.22855 0.96581 0.93107 1.03007 1.21841 0.82217 0.95668 1.08953 1.23859 0.90676 1.06386 0.93242 1.86398 1.44005 1.64842 1.41756 0.94410 0.83053 0.75883 0.75831 1.83698 1.17500 1.35918 1.72177 0.89262 0.88528 0.88304 0.74923 0.93013 0.89217 0.90355 0.91808 0.78535 0.82363 0.73075 0.89912 0.90727 0.88673 0.90283 0.79387 0.85213 0.73198 1.22352 1.23979 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.26 9.14 71.24 0.65 0.39 16 2 C 0.07 0.51 7.37 25.26 0.19 0.69 16 3 C -0.26 -1.43 6.31 -18.99 -0.12 -1.55 16 4 C 0.59 3.26 7.78 86.65 0.67 3.94 16 5 O -0.57 -6.86 15.32 -4.09 -0.06 -6.92 16 6 N -0.71 1.68 5.07 -445.84 -2.26 -0.58 16 7 C 0.14 -0.57 2.45 44.99 0.11 -0.46 16 8 H 0.07 0.13 7.58 -2.39 -0.02 0.11 16 9 C -0.12 0.63 5.49 30.59 0.17 0.79 16 10 C -0.10 0.68 5.19 30.59 0.16 0.84 16 11 C -0.04 0.36 2.48 -11.54 -0.03 0.33 16 12 H 0.13 -1.92 8.14 -2.39 -0.02 -1.94 16 13 C 0.41 -1.45 6.73 138.19 0.93 -0.52 16 14 N -0.54 0.50 9.11 -187.55 -1.71 -1.20 16 15 C 0.17 -0.20 11.20 83.96 0.94 0.74 16 16 C -0.32 -1.07 10.07 22.48 0.23 -0.84 16 17 C 0.51 3.82 7.75 84.88 0.66 4.48 16 18 O -0.59 -10.02 17.97 -5.25 -0.09 -10.12 16 19 N -0.61 0.67 5.25 -310.68 -1.63 -0.96 16 20 C -0.09 0.76 4.67 30.61 0.14 0.90 16 21 C -0.12 1.12 5.40 30.61 0.17 1.28 16 22 C -0.14 -0.17 10.46 23.65 0.25 0.08 16 23 C -0.04 -0.14 6.24 24.76 0.15 0.01 16 24 C -0.03 0.13 2.97 71.24 0.21 0.35 16 25 O -0.56 2.88 12.84 -148.98 -1.91 0.97 16 26 Si 0.80 -2.36 32.09 68.60 2.20 -0.16 16 27 O -0.19 -1.58 8.89 4.50 0.04 -1.54 16 28 H 0.09 0.05 8.14 -2.39 -0.02 0.03 16 29 H 0.10 0.39 8.07 -2.39 -0.02 0.37 16 30 H 0.10 0.32 8.09 -2.38 -0.02 0.30 16 31 H 0.41 -3.25 7.77 -92.71 -0.72 -3.98 16 32 H 0.05 0.03 8.14 -2.39 -0.02 0.01 16 33 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 34 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 35 H 0.06 -0.18 8.14 -2.38 -0.02 -0.19 16 36 H 0.20 -1.45 8.06 -2.91 -0.02 -1.48 16 37 H 0.16 0.34 8.06 -2.91 -0.02 0.32 16 38 H 0.43 -2.51 8.78 -92.71 -0.81 -3.32 16 39 H 0.08 -0.72 8.14 -2.39 -0.02 -0.74 16 40 H 0.07 -0.34 7.76 -2.39 -0.02 -0.36 16 41 H 0.09 -1.29 8.14 -2.39 -0.02 -1.31 16 42 H 0.08 -0.68 8.14 -2.39 -0.02 -0.70 16 43 H 0.19 -1.09 7.74 -2.91 -0.02 -1.12 16 44 H 0.13 -1.42 7.96 -2.39 -0.02 -1.44 16 45 H 0.41 -6.81 8.74 -74.06 -0.65 -7.46 16 46 H -0.30 -1.22 7.11 99.48 0.71 -0.51 16 47 H -0.31 -2.25 7.11 99.48 0.71 -1.54 16 Total: 0.00 -34.39 394.34 -1.06 -35.45 By element: Atomic # 1 Polarization: -25.29 SS G_CDS: -1.11 Total: -26.40 kcal Atomic # 6 Polarization: 5.98 SS G_CDS: 5.48 Total: 11.46 kcal Atomic # 7 Polarization: 2.86 SS G_CDS: -5.60 Total: -2.74 kcal Atomic # 8 Polarization: -15.57 SS G_CDS: -2.03 Total: -17.60 kcal Atomic # 14 Polarization: -2.36 SS G_CDS: 2.20 Total: -0.16 kcal Total: -34.39 -1.06 -35.45 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13308374.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.640 kcal (2) G-P(sol) polarization free energy of solvation -34.393 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.062 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.455 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.094 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds