Wall clock time and date at job start Sun Mar 7 2021 03:21:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47236 * 2 1 4 4 C 1.50705 * 109.46951 * 120.00006 * 2 1 3 5 5 C 1.38504 * 119.80314 * 245.00037 * 4 2 1 6 6 C 1.37829 * 120.30082 * 180.02562 * 5 4 2 7 7 C 1.39669 * 119.90300 * 359.97438 * 6 5 4 8 8 C 1.47543 * 120.18939 * 179.97438 * 7 6 5 9 9 O 1.21588 * 120.00350 * 179.97438 * 8 7 6 10 10 N 1.34784 * 119.99766 * 0.02562 * 8 7 6 11 11 C 1.46494 * 119.99635 * 179.97438 * 10 8 7 12 12 H 1.08997 * 109.47706 * 34.99696 * 11 10 8 13 13 C 1.53004 * 109.46982 * 155.00372 * 11 10 8 14 14 C 1.53000 * 109.47072 * 180.02562 * 13 11 10 15 15 C 1.53005 * 109.46950 * 299.99353 * 14 13 11 16 16 H 1.09003 * 109.47189 * 300.00626 * 15 14 13 17 17 C 1.50700 * 109.47199 * 180.02562 * 15 14 13 18 18 N 1.30642 * 119.25093 * 335.00079 * 17 15 14 19 19 C 1.33521 * 121.50326 * 179.97438 * 18 17 15 20 20 C 1.36201 * 119.90772 * 0.02562 * 19 18 17 21 21 C 1.41018 * 118.59511 * 359.97438 * 20 19 18 22 22 O 1.21979 * 120.70805 * 180.02562 * 21 20 19 23 23 N 1.34746 * 119.25405 * 154.72839 * 17 15 14 24 24 C 1.52995 * 109.46863 * 60.00428 * 15 14 13 25 25 C 1.53005 * 109.47118 * 274.99773 * 11 10 8 26 26 C 1.40174 * 119.62152 * 0.27662 * 7 6 5 27 27 O 1.35654 * 120.15143 * 179.70790 * 26 7 6 28 28 C 1.38095 * 119.80408 * 64.97944 * 4 2 1 29 29 H 0.96699 * 114.00465 * 59.99922 * 1 2 3 30 30 H 1.08997 * 109.47033 * 239.99592 * 2 1 3 31 31 H 1.48498 * 109.99746 * 298.68049 * 3 2 1 32 32 H 1.48495 * 109.99973 * 59.99847 * 3 2 1 33 33 H 1.07997 * 119.85080 * 0.02562 * 5 4 2 34 34 H 1.07999 * 120.04847 * 180.02562 * 6 5 4 35 35 H 0.96995 * 120.00015 * 359.72375 * 10 8 7 36 36 H 1.09002 * 109.46770 * 299.99381 * 13 11 10 37 37 H 1.08996 * 109.47170 * 59.99895 * 13 11 10 38 38 H 1.08990 * 109.47431 * 59.99389 * 14 13 11 39 39 H 1.09006 * 109.46868 * 179.97438 * 14 13 11 40 40 H 1.08000 * 120.04248 * 180.02562 * 19 18 17 41 41 H 1.08006 * 120.69882 * 180.02562 * 20 19 18 42 42 H 0.97000 * 120.04388 * 0.02763 * 23 17 15 43 43 H 1.08995 * 109.47831 * 59.99819 * 24 15 14 44 44 H 1.09001 * 109.47451 * 180.02562 * 24 15 14 45 45 H 1.08996 * 109.47503 * 300.00392 * 25 11 10 46 46 H 1.08997 * 109.47041 * 60.00616 * 25 11 10 47 47 H 0.96698 * 114.00221 * 89.99721 * 27 26 7 48 48 H 1.08003 * 119.96027 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6396 -0.0070 2.1906 6 6 3.1042 -0.6466 3.3197 7 6 2.8598 -2.0101 3.4978 8 6 3.3547 -2.7012 4.7038 9 8 3.1396 -3.8883 4.8556 10 7 4.0444 -2.0165 5.6376 11 6 4.5353 -2.7026 6.8352 12 1 4.8260 -3.7209 6.5772 13 6 5.7465 -1.9520 7.3926 14 6 6.2596 -2.6689 8.6430 15 6 5.1532 -2.7071 9.6992 16 1 4.8622 -1.6889 9.9576 17 6 5.6587 -3.4127 10.9311 18 7 6.6330 -4.2756 10.8179 19 6 7.1159 -4.9259 11.8794 20 6 6.5901 -4.6947 13.1144 21 6 5.5384 -3.7633 13.2367 22 8 5.0394 -3.5265 14.3243 23 7 5.0993 -3.1352 12.1251 24 6 3.9420 -3.4576 9.1419 25 6 3.4286 -2.7402 7.8911 26 6 2.1471 -2.7196 2.5213 27 8 1.9088 -4.0455 2.6805 28 6 1.6822 -2.0588 1.3943 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5139 -0.8899 31 1 1.5879 2.4585 -1.2242 32 1 1.5615 2.4679 1.2084 33 1 2.8287 1.0475 2.0540 34 1 3.6557 -0.0940 4.0659 35 1 4.2188 -1.0703 5.5149 36 1 6.5349 -1.9252 6.6404 37 1 5.4557 -0.9338 7.6507 38 1 6.5504 -3.6870 8.3846 39 1 7.1228 -2.1344 9.0398 40 1 7.9223 -5.6341 11.7588 41 1 6.9712 -5.2133 13.9818 42 1 4.3792 -2.4880 12.1854 43 1 4.2327 -4.4758 8.8834 44 1 3.1535 -3.4845 9.8940 45 1 3.1378 -1.7220 8.1492 46 1 2.5658 -3.2749 7.4942 47 1 1.0834 -4.2440 3.1436 48 1 1.1285 -2.6004 0.6416 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_13422076.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:21:16 Heat of formation + Delta-G solvation = -76.126836 kcal Electronic energy + Delta-G solvation = -32924.718573 eV Core-core repulsion = 28332.566648 eV Total energy + Delta-G solvation = -4592.151925 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.156 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -42.86022 -41.67913 -40.48793 -39.36698 -38.52820 -38.18503 -37.31273 -35.83735 -35.12168 -33.30568 -32.24292 -31.99009 -31.11614 -30.16034 -27.56924 -25.84630 -25.32365 -23.98509 -23.86071 -23.57569 -22.54451 -21.48079 -21.07273 -19.76052 -19.35485 -19.05851 -18.70844 -18.59701 -17.84283 -17.68220 -17.02021 -16.86698 -16.56401 -16.34434 -15.96120 -15.94233 -15.65275 -15.59041 -15.54980 -15.36018 -15.01883 -14.67363 -14.43475 -14.21841 -14.07382 -14.02740 -13.96187 -13.58766 -13.40895 -13.25094 -12.99145 -12.65872 -12.59461 -12.48853 -12.34739 -12.11565 -12.04834 -11.78953 -11.62701 -11.48319 -11.19716 -11.10951 -10.75926 -10.66039 -10.18592 -10.03196 -9.78585 -9.56037 -5.09996 -0.46649 -0.40393 0.11252 0.79041 1.10666 1.46311 1.56229 1.75098 1.81942 2.01844 2.54720 2.55260 2.67746 3.08826 3.15971 3.25253 3.40996 3.51166 3.54567 3.61206 3.64019 3.69507 3.79696 3.96204 3.97895 4.03257 4.12714 4.16282 4.17528 4.20247 4.23817 4.27843 4.43598 4.51696 4.54610 4.59392 4.69521 4.79728 4.84029 4.86825 4.93152 4.95563 4.99336 5.09730 5.12775 5.22103 5.22832 5.39834 5.43407 5.45002 5.52032 6.27041 6.43396 6.70068 6.70660 6.80075 7.21746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.083 4.083 3 Si 0.688 3.312 4 C -0.029 4.029 5 C -0.134 4.134 6 C -0.064 4.064 7 C -0.165 4.165 8 C 0.561 3.439 9 O -0.516 6.516 10 N -0.726 5.726 11 C 0.144 3.856 12 H 0.094 0.906 13 C -0.128 4.128 14 C -0.095 4.095 15 C -0.046 4.046 16 H 0.101 0.899 17 C 0.403 3.597 18 N -0.532 5.532 19 C 0.156 3.844 20 C -0.293 4.293 21 C 0.520 3.480 22 O -0.537 6.537 23 N -0.627 5.627 24 C -0.109 4.109 25 C -0.127 4.127 26 C 0.173 3.827 27 O -0.476 6.476 28 C -0.128 4.128 29 H 0.383 0.617 30 H 0.082 0.918 31 H -0.259 1.259 32 H -0.253 1.253 33 H 0.136 0.864 34 H 0.135 0.865 35 H 0.399 0.601 36 H 0.079 0.921 37 H 0.070 0.930 38 H 0.090 0.910 39 H 0.076 0.924 40 H 0.171 0.829 41 H 0.157 0.843 42 H 0.417 0.583 43 H 0.080 0.920 44 H 0.070 0.930 45 H 0.069 0.931 46 H 0.076 0.924 47 H 0.398 0.602 48 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.176 5.544 -5.446 8.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.193 4.193 3 Si 0.589 3.411 4 C -0.029 4.029 5 C -0.152 4.152 6 C -0.083 4.083 7 C -0.169 4.169 8 C 0.348 3.652 9 O -0.392 6.392 10 N -0.379 5.379 11 C 0.040 3.960 12 H 0.113 0.887 13 C -0.166 4.166 14 C -0.134 4.134 15 C -0.067 4.067 16 H 0.119 0.881 17 C 0.138 3.862 18 N -0.256 5.256 19 C 0.018 3.982 20 C -0.318 4.318 21 C 0.318 3.682 22 O -0.415 6.415 23 N -0.265 5.265 24 C -0.148 4.148 25 C -0.165 4.165 26 C 0.126 3.874 27 O -0.287 6.287 28 C -0.147 4.147 29 H 0.231 0.769 30 H 0.100 0.900 31 H -0.184 1.184 32 H -0.178 1.178 33 H 0.153 0.847 34 H 0.152 0.848 35 H 0.234 0.766 36 H 0.097 0.903 37 H 0.089 0.911 38 H 0.108 0.892 39 H 0.094 0.906 40 H 0.188 0.812 41 H 0.175 0.825 42 H 0.256 0.744 43 H 0.099 0.901 44 H 0.089 0.911 45 H 0.087 0.913 46 H 0.095 0.905 47 H 0.256 0.744 48 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.694 4.860 -4.963 7.451 hybrid contribution -2.086 0.717 0.526 2.267 sum 0.608 5.577 -4.438 7.153 Atomic orbital electron populations 1.86579 1.17391 1.80303 1.49959 1.24908 0.84846 1.11396 0.98117 0.94945 0.91522 0.74157 0.80503 1.19313 0.95790 0.93318 0.94484 1.20926 1.00126 1.00058 0.94082 1.21109 0.97445 0.92578 0.97188 1.20418 1.05708 0.94379 0.96408 1.18034 0.78263 0.86625 0.82298 1.90838 1.56126 1.14524 1.77688 1.45977 1.57273 1.13317 1.21312 1.21042 0.93117 0.98083 0.83763 0.88746 1.21861 0.97303 0.99507 0.97972 1.21367 0.96104 1.03309 0.92603 1.20561 0.97488 0.98748 0.89858 0.88109 1.23206 0.87121 0.89490 0.86382 1.68299 1.13296 1.11615 1.32371 1.22766 0.95162 0.92900 0.87350 1.22975 1.02157 1.05523 1.01128 1.17358 0.84948 0.82553 0.83332 1.91028 1.59915 1.65688 1.24892 1.44772 1.34497 1.38653 1.08627 1.21572 0.95384 1.00293 0.97516 1.21915 0.98910 1.01286 0.94413 1.18471 0.93800 0.83468 0.91657 1.84757 1.46156 1.17864 1.79944 1.21328 1.00700 0.93964 0.98695 0.76888 0.90039 1.18436 1.17758 0.84664 0.84753 0.76613 0.90264 0.91093 0.89162 0.90577 0.81224 0.82523 0.74386 0.90098 0.91104 0.91274 0.90531 0.74389 0.84355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.12 12.81 -35.23 -0.45 -0.33 16 2 C -0.08 0.13 2.78 36.01 0.10 0.23 16 3 Si 0.69 -1.76 29.83 -169.99 -5.07 -6.83 16 4 C -0.03 0.01 5.39 -104.57 -0.56 -0.56 16 5 C -0.13 0.22 8.64 -39.63 -0.34 -0.13 16 6 C -0.06 0.13 9.54 -39.20 -0.37 -0.25 16 7 C -0.17 -0.10 5.89 -104.84 -0.62 -0.72 16 8 C 0.56 0.77 7.73 -12.46 -0.10 0.68 16 9 O -0.52 -2.58 14.82 -16.58 -0.25 -2.82 16 10 N -0.73 1.52 5.03 -54.84 -0.28 1.25 16 11 C 0.14 -0.35 2.45 -67.93 -0.17 -0.52 16 12 H 0.09 0.00 7.58 -51.93 -0.39 -0.40 16 13 C -0.13 0.58 5.39 -26.73 -0.14 0.43 16 14 C -0.10 0.36 4.67 -26.73 -0.12 0.24 16 15 C -0.05 0.18 2.48 -91.77 -0.23 -0.04 16 16 H 0.10 -0.59 8.14 -51.93 -0.42 -1.01 16 17 C 0.40 -0.60 6.73 -155.57 -1.05 -1.65 16 18 N -0.53 0.14 9.11 -10.63 -0.10 0.04 16 19 C 0.16 -0.07 11.20 -17.55 -0.20 -0.27 16 20 C -0.29 -0.36 10.07 -39.26 -0.40 -0.75 16 21 C 0.52 1.62 7.75 -15.10 -0.12 1.51 16 22 O -0.54 -3.94 17.97 4.94 0.09 -3.85 16 23 N -0.63 0.36 5.25 -12.27 -0.06 0.30 16 24 C -0.11 0.36 5.19 -26.71 -0.14 0.22 16 25 C -0.13 0.36 5.50 -26.70 -0.15 0.21 16 26 C 0.17 0.29 6.72 -38.70 -0.26 0.03 16 27 O -0.48 -1.18 11.58 -40.53 -0.47 -1.65 16 28 C -0.13 -0.10 9.60 -39.48 -0.38 -0.48 16 29 H 0.38 -1.56 8.74 45.56 0.40 -1.17 16 30 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 31 H -0.26 0.07 7.11 56.52 0.40 0.48 16 32 H -0.25 -0.05 7.04 56.52 0.40 0.35 16 33 H 0.14 -0.49 4.83 -52.49 -0.25 -0.74 16 34 H 0.13 -0.71 6.40 -52.49 -0.34 -1.05 16 35 H 0.40 -1.91 6.63 -40.82 -0.27 -2.18 16 36 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 37 H 0.07 -0.40 8.14 -51.93 -0.42 -0.83 16 38 H 0.09 -0.22 7.76 -51.93 -0.40 -0.62 16 39 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 40 H 0.17 -0.54 8.06 -52.49 -0.42 -0.96 16 41 H 0.16 0.05 8.06 -52.48 -0.42 -0.37 16 42 H 0.42 -1.17 8.78 -40.82 -0.36 -1.52 16 43 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 44 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 45 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 46 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 47 H 0.40 -0.41 9.06 45.56 0.41 0.01 16 48 H 0.14 0.04 8.06 -52.48 -0.42 -0.38 16 LS Contribution 395.33 15.07 5.96 5.96 Total: 0.00 -13.36 395.33 -11.33 -24.70 By element: Atomic # 1 Polarization: -9.46 SS G_CDS: -5.47 Total: -14.93 kcal Atomic # 6 Polarization: 3.41 SS G_CDS: -5.24 Total: -1.83 kcal Atomic # 7 Polarization: 2.03 SS G_CDS: -0.44 Total: 1.59 kcal Atomic # 8 Polarization: -7.58 SS G_CDS: -1.08 Total: -8.66 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.07 Total: -6.83 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -13.36 -11.33 -24.70 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13422076.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.431 kcal (2) G-P(sol) polarization free energy of solvation -13.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.793 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.334 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds