Wall clock time and date at job start Sun Mar 7 2021 03:21:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.37786 * 119.85139 * 2 1 4 4 C 1.39704 * 119.91062 * 179.97438 * 3 2 1 5 5 C 1.47534 * 120.19563 * 179.97438 * 4 3 2 6 6 O 1.21585 * 120.00269 * 180.02562 * 5 4 3 7 7 N 1.34782 * 119.99870 * 0.02562 * 5 4 3 8 8 C 1.46499 * 120.00074 * 179.97438 * 7 5 4 9 9 H 1.09001 * 109.46813 * 35.00305 * 8 7 5 10 10 C 1.53000 * 109.46840 * 155.00031 * 8 7 5 11 11 C 1.52997 * 109.47060 * 180.02562 * 10 8 7 12 12 C 1.53006 * 109.47127 * 300.00449 * 11 10 8 13 13 H 1.09001 * 109.47002 * 299.99574 * 12 11 10 14 14 C 1.50703 * 109.47126 * 179.97438 * 12 11 10 15 15 N 1.30636 * 119.25523 * 265.00170 * 14 12 11 16 16 C 1.33522 * 121.50660 * 179.97438 * 15 14 12 17 17 C 1.36204 * 119.90863 * 0.02562 * 16 15 14 18 18 C 1.41019 * 118.59252 * 359.97438 * 17 16 15 19 19 O 1.21982 * 120.70698 * 180.02562 * 18 17 16 20 20 N 1.34747 * 119.24899 * 84.72445 * 14 12 11 21 21 C 1.52997 * 109.47164 * 59.99836 * 12 11 10 22 22 C 1.52996 * 109.47185 * 275.00149 * 8 7 5 23 23 C 1.40142 * 119.61658 * 0.25739 * 4 3 2 24 24 O 1.35651 * 120.15151 * 179.71938 * 23 4 3 25 25 C 1.38713 * 119.69775 * 359.46564 * 23 4 3 26 26 C 1.50693 * 119.96077 * 180.25396 * 25 23 4 27 27 O 1.42904 * 109.46975 * 285.28081 * 26 25 23 28 28 Si 1.86296 * 109.47385 * 165.28187 * 26 25 23 29 29 C 1.38061 * 120.07906 * 0.53437 * 25 23 4 30 30 H 1.09010 * 109.47150 * 89.99999 * 1 2 3 31 31 H 1.08994 * 109.47619 * 210.00199 * 1 2 3 32 32 H 1.09003 * 109.47339 * 330.00517 * 1 2 3 33 33 H 1.08002 * 120.04686 * 359.97438 * 3 2 1 34 34 H 0.97002 * 119.99499 * 0.02562 * 7 5 4 35 35 H 1.09002 * 109.47398 * 300.00326 * 10 8 7 36 36 H 1.09001 * 109.47194 * 60.00507 * 10 8 7 37 37 H 1.08998 * 109.47533 * 59.99948 * 11 10 8 38 38 H 1.08996 * 109.47853 * 180.02562 * 11 10 8 39 39 H 1.07999 * 120.04377 * 179.97438 * 16 15 14 40 40 H 1.08000 * 120.70152 * 180.02562 * 17 16 15 41 41 H 0.96996 * 120.04886 * 0.02562 * 20 14 12 42 42 H 1.09002 * 109.47045 * 180.02562 * 21 12 11 43 43 H 1.09001 * 109.47375 * 59.99966 * 21 12 11 44 44 H 1.08992 * 109.47554 * 299.99819 * 22 8 7 45 45 H 1.09004 * 109.47108 * 60.00069 * 22 8 7 46 46 H 0.96700 * 113.99410 * 89.99934 * 24 23 4 47 47 H 1.09005 * 109.47294 * 45.27752 * 26 25 23 48 48 H 0.96693 * 114.00034 * 299.99787 * 27 26 25 49 49 H 1.48499 * 110.00389 * 58.67848 * 28 26 25 50 50 H 1.48505 * 110.00144 * 180.02562 * 28 26 25 51 51 H 1.08007 * 119.79729 * 179.71668 * 29 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1950 0.0000 4 6 3.5898 1.1965 0.0005 5 6 4.3305 2.4724 0.0000 6 8 5.5464 2.4696 0.0000 7 7 3.6594 3.6412 -0.0005 8 6 4.3949 4.9082 -0.0005 9 1 5.3055 4.7997 -0.5897 10 6 3.5204 6.0055 -0.6108 11 6 4.2887 7.3285 -0.6114 12 6 4.6535 7.7071 0.8255 13 1 3.7431 7.8160 1.4149 14 6 5.4109 9.0100 0.8249 15 7 6.7170 8.9893 0.8250 16 6 7.4328 10.1164 0.8239 17 6 6.8003 11.3226 0.8232 18 6 5.3903 11.3453 0.8231 19 8 4.7843 12.4039 0.8220 20 7 4.7253 10.1700 0.8185 21 6 5.5280 6.6099 1.4357 22 6 4.7591 5.2865 1.4365 23 6 4.2837 -0.0211 -0.0044 24 8 5.6401 -0.0324 -0.0097 25 6 3.5771 -1.2148 0.0015 26 6 4.3171 -2.5274 0.0020 27 8 4.8553 -2.7713 -1.2992 28 14 3.1441 -3.9016 0.4564 29 6 2.1965 -1.2016 0.0010 30 1 -0.3634 0.0000 -1.0278 31 1 -0.3634 -0.8899 0.5138 32 1 -0.3634 0.8900 0.5138 33 1 1.6511 2.1294 -0.0004 34 1 2.6894 3.6434 -0.0002 35 1 3.2609 5.7359 -1.6345 36 1 2.6098 6.1140 -0.0216 37 1 5.1992 7.2198 -1.2007 38 1 3.6657 8.1104 -1.0456 39 1 8.5119 10.0717 0.8245 40 1 7.3666 12.2422 0.8219 41 1 3.7554 10.1610 0.8148 42 1 5.7875 6.8794 2.4594 43 1 6.4384 6.5010 0.8463 44 1 3.8485 5.3951 2.0256 45 1 5.3821 4.5048 1.8712 46 1 6.0368 -0.0372 0.8722 47 1 5.1284 -2.4869 0.7289 48 1 4.1885 -2.8200 -1.9977 49 1 2.0166 -3.9470 -0.5089 50 1 3.8621 -5.2015 0.4611 51 1 1.6509 -2.1338 0.0009 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_13422088.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:21:21 Heat of formation + Delta-G solvation = -81.795603 kcal Electronic energy + Delta-G solvation = -35381.646164 eV Core-core repulsion = 30633.710804 eV Total energy + Delta-G solvation = -4747.935360 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.59 seconds Orbital eigenvalues (eV) -42.86935 -41.80187 -40.60927 -39.40076 -38.38679 -38.02621 -37.67460 -35.84396 -35.13894 -33.31065 -33.12755 -32.26728 -31.93288 -30.11303 -27.71225 -26.85492 -26.19096 -25.46125 -24.67543 -23.96020 -22.73622 -22.04830 -21.44674 -20.95873 -19.76184 -19.63512 -19.10572 -18.41656 -18.18305 -17.78857 -17.48647 -16.97434 -16.83097 -16.77100 -16.20444 -16.04875 -15.89105 -15.74672 -15.56945 -15.38834 -15.35559 -14.93058 -14.86631 -14.69637 -14.48576 -14.28732 -14.10022 -14.05384 -13.67493 -13.58376 -13.45849 -13.33586 -13.10413 -12.67769 -12.61769 -12.50944 -12.33621 -12.26707 -12.10224 -11.80275 -11.73816 -11.70421 -11.53932 -11.20579 -11.10061 -10.88263 -10.50037 -10.24458 -10.05598 -9.57467 -9.56879 -5.05959 -0.47596 -0.37689 0.00939 0.78356 1.17559 1.47430 1.55116 1.74552 1.87765 2.01337 2.54173 2.55395 2.66626 3.14269 3.25387 3.28068 3.39876 3.43059 3.46081 3.54800 3.59463 3.61342 3.80148 3.91467 3.96955 4.00541 4.04903 4.10796 4.17803 4.22841 4.24537 4.25974 4.39577 4.42056 4.48956 4.51021 4.53048 4.57849 4.66098 4.72767 4.78554 4.86661 4.87217 4.91005 4.93095 5.03196 5.09394 5.14480 5.25724 5.27209 5.38875 5.42434 5.44912 5.53108 6.39701 6.41896 6.69920 6.74446 6.79039 7.21249 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.165 4.165 5 C 0.560 3.440 6 O -0.514 6.514 7 N -0.727 5.727 8 C 0.144 3.856 9 H 0.094 0.906 10 C -0.124 4.124 11 C -0.108 4.108 12 C -0.046 4.046 13 H 0.101 0.899 14 C 0.402 3.598 15 N -0.531 5.531 16 C 0.157 3.843 17 C -0.293 4.293 18 C 0.520 3.480 19 O -0.537 6.537 20 N -0.627 5.627 21 C -0.096 4.096 22 C -0.130 4.130 23 C 0.192 3.808 24 O -0.467 6.467 25 C -0.151 4.151 26 C -0.065 4.065 27 O -0.519 6.519 28 Si 0.688 3.312 29 C -0.081 4.081 30 H 0.074 0.926 31 H 0.072 0.928 32 H 0.071 0.929 33 H 0.131 0.869 34 H 0.398 0.602 35 H 0.078 0.922 36 H 0.073 0.927 37 H 0.081 0.919 38 H 0.073 0.927 39 H 0.171 0.829 40 H 0.157 0.843 41 H 0.417 0.583 42 H 0.073 0.927 43 H 0.089 0.911 44 H 0.066 0.934 45 H 0.076 0.924 46 H 0.394 0.606 47 H 0.116 0.884 48 H 0.374 0.626 49 H -0.259 1.259 50 H -0.255 1.255 51 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.772 -3.554 3.087 8.247 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.098 4.098 3 C -0.086 4.086 4 C -0.169 4.169 5 C 0.348 3.652 6 O -0.389 6.389 7 N -0.379 5.379 8 C 0.040 3.960 9 H 0.112 0.888 10 C -0.162 4.162 11 C -0.147 4.147 12 C -0.066 4.066 13 H 0.119 0.881 14 C 0.137 3.863 15 N -0.255 5.255 16 C 0.018 3.982 17 C -0.318 4.318 18 C 0.318 3.682 19 O -0.415 6.415 20 N -0.266 5.266 21 C -0.135 4.135 22 C -0.169 4.169 23 C 0.145 3.855 24 O -0.278 6.278 25 C -0.152 4.152 26 C -0.175 4.175 27 O -0.325 6.325 28 Si 0.589 3.411 29 C -0.099 4.099 30 H 0.092 0.908 31 H 0.091 0.909 32 H 0.090 0.910 33 H 0.148 0.852 34 H 0.233 0.767 35 H 0.097 0.903 36 H 0.092 0.908 37 H 0.100 0.900 38 H 0.092 0.908 39 H 0.188 0.812 40 H 0.175 0.825 41 H 0.256 0.744 42 H 0.092 0.908 43 H 0.108 0.892 44 H 0.084 0.916 45 H 0.095 0.905 46 H 0.253 0.747 47 H 0.134 0.866 48 H 0.221 0.779 49 H -0.184 1.184 50 H -0.179 1.179 51 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.368 -4.172 2.564 7.266 hybrid contribution -1.077 1.209 -0.713 1.769 sum -6.445 -2.963 1.850 7.331 Atomic orbital electron populations 1.20837 0.90062 1.03543 1.02922 1.19784 0.96732 0.92291 1.00946 1.21121 0.92148 0.98248 0.97059 1.20402 0.93924 0.93534 1.09016 1.18015 0.87332 0.83292 0.76607 1.90848 1.12924 1.87204 1.47953 1.45972 1.10152 1.05447 1.76367 1.21040 0.96066 0.81880 0.97017 0.88780 1.21783 0.98580 0.93658 1.02208 1.21542 1.01719 0.97302 0.94115 1.20560 0.98150 0.88615 0.99319 0.88094 1.23205 0.89352 0.87703 0.86016 1.68307 1.03233 1.30513 1.23399 1.22776 1.01102 0.86959 0.87333 1.22980 0.93193 1.01506 1.14087 1.17360 0.89616 0.82759 0.78451 1.91028 1.70436 1.28459 1.51611 1.44774 1.13205 1.07634 1.60966 1.21399 0.98584 0.91544 1.01966 1.21976 1.00864 0.97601 0.96429 1.18231 0.83969 0.89668 0.93672 1.84811 1.14002 1.95862 1.33100 1.20660 0.93973 0.95780 1.04783 1.24904 1.05072 0.98832 0.88720 1.86684 1.36468 1.93238 1.16070 0.95140 0.77924 0.77728 0.90294 1.21177 0.92920 0.98565 0.97263 0.90751 0.90903 0.91002 0.85161 0.76727 0.90325 0.90807 0.90022 0.90818 0.81216 0.82514 0.74416 0.90840 0.89245 0.91567 0.90531 0.74710 0.86566 0.77923 1.18408 1.17946 0.84655 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.49 10.00 36.00 0.36 0.85 16 2 C -0.10 0.22 5.87 -104.68 -0.61 -0.40 16 3 C -0.07 0.14 9.18 -39.20 -0.36 -0.22 16 4 C -0.17 -0.08 5.89 -104.85 -0.62 -0.69 16 5 C 0.56 0.80 7.73 -12.47 -0.10 0.70 16 6 O -0.51 -2.63 14.82 -16.59 -0.25 -2.88 16 7 N -0.73 1.49 5.03 -54.85 -0.28 1.21 16 8 C 0.14 -0.34 2.45 -67.93 -0.17 -0.51 16 9 H 0.09 0.01 7.58 -51.93 -0.39 -0.38 16 10 C -0.12 0.58 5.39 -26.73 -0.14 0.44 16 11 C -0.11 0.47 5.19 -26.73 -0.14 0.33 16 12 C -0.05 0.18 2.48 -91.77 -0.23 -0.04 16 13 H 0.10 -0.60 8.14 -51.93 -0.42 -1.02 16 14 C 0.40 -0.61 6.73 -155.57 -1.05 -1.66 16 15 N -0.53 0.03 9.11 -10.63 -0.10 -0.06 16 16 C 0.16 -0.05 11.20 -17.55 -0.20 -0.25 16 17 C -0.29 -0.35 10.07 -39.26 -0.40 -0.75 16 18 C 0.52 1.55 7.75 -15.09 -0.12 1.43 16 19 O -0.54 -3.84 17.97 4.94 0.09 -3.75 16 20 N -0.63 0.49 5.25 -12.27 -0.06 0.43 16 21 C -0.10 0.26 4.67 -26.71 -0.12 0.14 16 22 C -0.13 0.34 5.50 -26.71 -0.15 0.20 16 23 C 0.19 0.28 6.69 -38.69 -0.26 0.02 16 24 O -0.47 -1.31 10.91 -40.53 -0.44 -1.75 16 25 C -0.15 0.03 5.27 -104.52 -0.55 -0.52 16 26 C -0.07 0.02 2.37 36.00 0.09 0.10 16 27 O -0.52 -1.07 12.88 -35.23 -0.45 -1.52 16 28 Si 0.69 -1.20 30.24 -169.99 -5.14 -6.34 16 29 C -0.08 0.13 8.30 -39.53 -0.33 -0.20 16 30 H 0.07 -0.32 8.14 -51.92 -0.42 -0.74 16 31 H 0.07 -0.34 8.08 -51.93 -0.42 -0.76 16 32 H 0.07 -0.37 8.08 -51.93 -0.42 -0.79 16 33 H 0.13 -0.65 6.40 -52.49 -0.34 -0.99 16 34 H 0.40 -1.86 6.63 -40.82 -0.27 -2.13 16 35 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 36 H 0.07 -0.45 8.14 -51.93 -0.42 -0.87 16 37 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 38 H 0.07 -0.37 8.14 -51.93 -0.42 -0.79 16 39 H 0.17 -0.50 8.06 -52.49 -0.42 -0.93 16 40 H 0.16 0.05 8.06 -52.49 -0.42 -0.38 16 41 H 0.42 -1.31 8.78 -40.82 -0.36 -1.67 16 42 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 43 H 0.09 -0.11 7.76 -51.93 -0.40 -0.51 16 44 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 45 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 46 H 0.39 -0.36 9.06 45.56 0.41 0.05 16 47 H 0.12 -0.11 7.84 -51.93 -0.41 -0.52 16 48 H 0.37 -0.34 8.70 45.56 0.40 0.05 16 49 H -0.26 0.10 6.68 56.52 0.38 0.47 16 50 H -0.25 -0.46 7.11 56.52 0.40 -0.05 16 51 H 0.14 -0.41 4.83 -52.48 -0.25 -0.66 16 LS Contribution 415.87 15.07 6.27 6.27 Total: 0.00 -13.41 415.87 -11.77 -25.18 By element: Atomic # 1 Polarization: -9.43 SS G_CDS: -6.32 Total: -15.75 kcal Atomic # 6 Polarization: 4.06 SS G_CDS: -5.08 Total: -1.02 kcal Atomic # 7 Polarization: 2.01 SS G_CDS: -0.44 Total: 1.58 kcal Atomic # 8 Polarization: -8.85 SS G_CDS: -1.05 Total: -9.91 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.14 Total: -6.34 kcal Total LS contribution 6.27 Total: 6.27 kcal Total: -13.41 -11.77 -25.18 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13422088.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.614 kcal (2) G-P(sol) polarization free energy of solvation -13.409 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.023 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.772 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.182 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.796 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.59 seconds