Wall clock time and date at job start Sat Mar 6 2021 19:58:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.47320 * 2 1 4 4 C 1.50706 * 109.46736 * 119.99702 * 2 1 3 5 5 C 1.32689 * 124.68376 * 65.00057 * 4 2 1 6 6 C 1.44513 * 113.09798 * 179.72715 * 5 4 2 7 7 C 1.47047 * 123.48984 * 180.24488 * 6 5 4 8 8 O 1.21655 * 119.99258 * 180.02562 * 7 6 5 9 9 N 1.34774 * 120.00131 * 0.02562 * 7 6 5 10 10 C 1.46501 * 119.99584 * 179.97438 * 9 7 6 11 11 H 1.08998 * 109.47195 * 35.00407 * 10 9 7 12 12 C 1.53002 * 109.46630 * 154.99951 * 10 9 7 13 13 C 1.52999 * 109.47023 * 180.02562 * 12 10 9 14 14 C 1.53005 * 109.47007 * 299.99961 * 13 12 10 15 15 H 1.09010 * 109.47012 * 300.00003 * 14 13 12 16 16 C 1.50698 * 109.47158 * 180.02562 * 14 13 12 17 17 N 1.30632 * 119.25524 * 334.99591 * 16 14 13 18 18 C 1.33519 * 121.50769 * 179.97438 * 17 16 14 19 19 C 1.36207 * 119.90966 * 0.02562 * 18 17 16 20 20 C 1.41025 * 118.59078 * 359.97438 * 19 18 17 21 21 O 1.21982 * 120.70743 * 180.02562 * 20 19 18 22 22 N 1.34754 * 119.25426 * 154.72614 * 16 14 13 23 23 C 1.52993 * 109.47207 * 59.99723 * 14 13 12 24 24 C 1.52992 * 109.47299 * 274.99405 * 10 9 7 25 25 C 1.36224 * 113.01349 * 0.26979 * 6 5 4 26 26 Cl 1.73599 * 124.60108 * 179.97438 * 25 6 5 27 27 S 1.70443 * 110.79128 * 359.97438 * 25 6 5 28 28 H 0.96705 * 114.00137 * 300.00232 * 1 2 3 29 29 H 1.08991 * 109.47429 * 239.99742 * 2 1 3 30 30 H 1.48500 * 109.99974 * 178.67672 * 3 2 1 31 31 H 1.48497 * 109.99690 * 299.99728 * 3 2 1 32 32 H 1.08002 * 123.45421 * 0.02562 * 5 4 2 33 33 H 0.96992 * 119.99956 * 359.97438 * 9 7 6 34 34 H 1.09007 * 109.47523 * 299.99846 * 12 10 9 35 35 H 1.08998 * 109.47682 * 60.00131 * 12 10 9 36 36 H 1.08999 * 109.47663 * 59.99668 * 13 12 10 37 37 H 1.08998 * 109.47572 * 180.02562 * 13 12 10 38 38 H 1.08004 * 120.05028 * 180.02562 * 18 17 16 39 39 H 1.07994 * 120.70267 * 180.02562 * 19 18 17 40 40 H 0.97002 * 120.03936 * 359.97438 * 22 16 14 41 41 H 1.09004 * 109.47226 * 60.00540 * 23 14 13 42 42 H 1.08997 * 109.47489 * 180.02562 * 23 14 13 43 43 H 1.08998 * 109.47815 * 300.00623 * 24 10 9 44 44 H 1.09003 * 109.46963 * 60.00650 * 24 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.7481 -1.9996 1.4858 6 6 2.3410 -2.4200 2.7349 7 6 2.2797 -3.8003 3.2381 8 8 2.8013 -4.0843 4.2998 9 7 1.6458 -4.7508 2.5230 10 6 1.5854 -6.1261 3.0242 11 1 1.5043 -6.1135 4.1111 12 6 0.3651 -6.8321 2.4299 13 6 0.3015 -8.2683 2.9537 14 6 1.5724 -9.0165 2.5462 15 1 1.6536 -9.0294 1.4592 16 6 1.5095 -10.4312 3.0616 17 7 0.7709 -10.6981 4.1055 18 6 0.6821 -11.9354 4.5995 19 6 1.3722 -12.9523 4.0122 20 6 2.1696 -12.6644 2.8853 21 8 2.8033 -13.5457 2.3290 22 7 2.2122 -11.3933 2.4319 23 6 2.7926 -8.3104 3.1404 24 6 2.8562 -6.8739 2.6161 25 6 2.9619 -1.4049 3.3980 26 17 3.7709 -1.5741 4.9246 27 16 2.8366 0.0538 2.5253 28 1 -0.3934 0.4418 0.7651 29 1 1.7923 -0.5138 -0.8899 30 1 3.5346 1.7702 0.0322 31 1 1.5616 2.4678 -1.2085 32 1 1.2150 -2.6674 0.8253 33 1 1.2297 -4.5242 1.6767 34 1 -0.5404 -6.2994 2.7206 35 1 0.4460 -6.8448 1.3430 36 1 0.2203 -8.2554 4.0406 37 1 -0.5676 -8.7715 2.5301 38 1 0.0640 -12.1296 5.4636 39 1 1.3093 -13.9579 4.4009 40 1 2.7505 -11.1723 1.6558 41 1 2.7115 -8.2975 4.2273 42 1 3.6980 -8.8431 2.8497 43 1 2.9373 -6.8865 1.5292 44 1 3.7256 -6.3709 3.0395 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_13431040.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:58:16 Heat of formation + Delta-G solvation = -38.900510 kcal Electronic energy + Delta-G solvation = -31339.822434 eV Core-core repulsion = 26797.319410 eV Total energy + Delta-G solvation = -4542.503024 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.074 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.89764 -41.25360 -39.79166 -38.92133 -38.41638 -37.91254 -36.90979 -35.84737 -35.11948 -32.56630 -31.78984 -31.61430 -30.18894 -26.91968 -26.39565 -25.57447 -24.83401 -23.71681 -22.61579 -22.02996 -21.10590 -20.44366 -19.76843 -19.35795 -19.11961 -18.07984 -17.83312 -17.72199 -17.06983 -16.95965 -16.45490 -16.13988 -16.02578 -15.71161 -15.65547 -15.60871 -15.18379 -15.14783 -14.76715 -14.51736 -14.34375 -14.26000 -14.08995 -14.00557 -13.94640 -13.39456 -13.14200 -12.89574 -12.57404 -12.49651 -12.36459 -12.32726 -12.12743 -12.09182 -12.02333 -11.84004 -11.58630 -11.38112 -11.29733 -11.08599 -10.87635 -10.55165 -10.11655 -9.86250 -9.66945 -9.60807 -5.12782 -0.59344 -0.45570 -0.15990 0.51606 0.67829 0.76774 1.07642 1.20902 1.55935 1.59130 1.91469 2.19249 2.23128 2.50202 2.78563 3.31377 3.42270 3.57635 3.62833 3.65443 3.73086 3.88106 3.92268 4.01286 4.17300 4.18019 4.30139 4.37351 4.39400 4.43365 4.49046 4.50365 4.53484 4.67405 4.82131 4.85008 4.88660 4.99968 5.04103 5.09301 5.18370 5.24284 5.33549 5.35341 5.44347 5.47687 5.58952 6.52994 6.66494 6.71054 6.72424 7.21651 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.016 4.016 3 Si 0.709 3.291 4 C -0.229 4.229 5 C -0.066 4.066 6 C -0.166 4.166 7 C 0.570 3.430 8 O -0.559 6.559 9 N -0.705 5.705 10 C 0.145 3.855 11 H 0.067 0.933 12 C -0.117 4.117 13 C -0.092 4.092 14 C -0.040 4.040 15 H 0.132 0.868 16 C 0.409 3.591 17 N -0.544 5.544 18 C 0.173 3.827 19 C -0.319 4.319 20 C 0.509 3.491 21 O -0.594 6.594 22 N -0.615 5.615 23 C -0.103 4.103 24 C -0.120 4.120 25 C -0.140 4.140 26 Cl 0.001 6.999 27 S 0.258 5.742 28 H 0.398 0.602 29 H 0.136 0.864 30 H -0.264 1.264 31 H -0.267 1.267 32 H 0.183 0.817 33 H 0.415 0.585 34 H 0.081 0.919 35 H 0.095 0.905 36 H 0.074 0.926 37 H 0.082 0.918 38 H 0.198 0.802 39 H 0.158 0.842 40 H 0.428 0.572 41 H 0.062 0.938 42 H 0.076 0.924 43 H 0.090 0.910 44 H 0.050 0.950 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.512 7.478 -3.854 10.058 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.130 4.130 3 Si 0.613 3.387 4 C -0.347 4.347 5 C -0.095 4.095 6 C -0.186 4.186 7 C 0.356 3.644 8 O -0.439 6.439 9 N -0.357 5.357 10 C 0.041 3.959 11 H 0.086 0.914 12 C -0.155 4.155 13 C -0.130 4.130 14 C -0.060 4.060 15 H 0.150 0.850 16 C 0.145 3.855 17 N -0.267 5.267 18 C 0.034 3.966 19 C -0.343 4.343 20 C 0.310 3.690 21 O -0.476 6.476 22 N -0.252 5.252 23 C -0.142 4.142 24 C -0.159 4.159 25 C -0.287 4.287 26 Cl 0.030 6.970 27 S 0.523 5.477 28 H 0.249 0.751 29 H 0.153 0.847 30 H -0.190 1.190 31 H -0.192 1.192 32 H 0.200 0.800 33 H 0.252 0.748 34 H 0.100 0.900 35 H 0.113 0.887 36 H 0.092 0.908 37 H 0.100 0.900 38 H 0.215 0.785 39 H 0.176 0.824 40 H 0.269 0.731 41 H 0.081 0.919 42 H 0.094 0.906 43 H 0.108 0.892 44 H 0.068 0.932 Dipole moment (debyes) X Y Z Total from point charges -4.184 8.869 -3.398 10.378 hybrid contribution 0.602 -2.786 -0.760 2.950 sum -3.582 6.083 -4.158 8.193 Atomic orbital electron populations 1.86517 1.16094 1.81943 1.50496 1.24376 0.85520 1.08463 0.94602 0.94338 0.79788 0.76151 0.88469 1.24933 1.08360 0.98742 1.02622 1.21154 0.98795 0.95437 0.94100 1.20387 1.06045 0.94286 0.97855 1.17666 0.78399 0.84490 0.83847 1.90866 1.46960 1.82532 1.23520 1.45776 1.56294 1.08574 1.25031 1.21056 0.95924 0.79728 0.99240 0.91440 1.21789 0.96639 0.94881 1.02199 1.21325 0.95281 0.93688 1.02751 1.20679 0.98561 0.84141 1.02582 0.85006 1.23726 0.83120 0.92128 0.86519 1.68387 1.23011 1.22560 1.12769 1.23182 0.91159 0.86091 0.96210 1.23003 1.06419 1.04233 1.00672 1.17662 0.83453 0.81546 0.86377 1.90988 1.48731 1.45871 1.62057 1.44634 1.41323 1.09283 1.29999 1.21494 0.96389 0.95310 1.01057 1.21830 0.97483 0.94096 1.02442 1.25803 1.04811 1.02133 0.95971 1.98427 1.76191 1.97489 1.24892 1.83231 1.50286 1.04950 1.09217 0.75120 0.84708 1.18966 1.19224 0.80030 0.74787 0.90012 0.88663 0.90768 0.89951 0.78521 0.82384 0.73094 0.91903 0.90564 0.89193 0.93159 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 4.16 12.88 -148.98 -1.92 2.24 16 2 C -0.02 0.13 2.94 71.24 0.21 0.34 16 3 Si 0.71 -4.72 30.92 68.60 2.12 -2.60 16 4 C -0.23 1.45 5.65 24.52 0.14 1.59 16 5 C -0.07 0.40 9.75 22.70 0.22 0.62 16 6 C -0.17 -0.07 5.98 -19.84 -0.12 -0.19 16 7 C 0.57 1.73 7.75 86.55 0.67 2.40 16 8 O -0.56 -6.31 14.57 -4.20 -0.06 -6.37 16 9 N -0.70 3.41 5.06 -446.16 -2.26 1.15 16 10 C 0.14 -0.76 2.45 44.99 0.11 -0.65 16 11 H 0.07 0.06 7.58 -2.39 -0.02 0.04 16 12 C -0.12 1.26 5.39 30.59 0.16 1.43 16 13 C -0.09 0.82 4.67 30.60 0.14 0.96 16 14 C -0.04 0.37 2.48 -11.54 -0.03 0.34 16 15 H 0.13 -1.95 8.14 -2.38 -0.02 -1.97 16 16 C 0.41 -1.48 6.73 138.18 0.93 -0.55 16 17 N -0.54 0.57 9.11 -187.55 -1.71 -1.14 16 18 C 0.17 -0.21 11.20 83.96 0.94 0.73 16 19 C -0.32 -1.08 10.07 22.48 0.23 -0.85 16 20 C 0.51 3.85 7.75 84.89 0.66 4.51 16 21 O -0.59 -10.08 17.97 -5.26 -0.09 -10.18 16 22 N -0.61 0.66 5.25 -310.70 -1.63 -0.97 16 23 C -0.10 0.69 5.19 30.61 0.16 0.85 16 24 C -0.12 0.69 5.50 30.61 0.17 0.86 16 25 C -0.14 -0.33 6.87 67.35 0.46 0.13 16 26 Cl 0.00 0.01 27.20 -2.72 -0.07 -0.07 16 27 S 0.26 -0.97 20.19 -56.49 -1.14 -2.11 16 28 H 0.40 -5.88 8.70 -74.05 -0.64 -6.52 16 29 H 0.14 -1.21 7.96 -2.39 -0.02 -1.23 16 30 H -0.26 0.46 7.11 99.48 0.71 1.17 16 31 H -0.27 0.03 7.11 99.48 0.71 0.73 16 32 H 0.18 -2.12 7.10 -2.91 -0.02 -2.14 16 33 H 0.41 -4.61 7.15 -92.71 -0.66 -5.27 16 34 H 0.08 -0.85 8.14 -2.38 -0.02 -0.86 16 35 H 0.09 -1.41 8.14 -2.39 -0.02 -1.43 16 36 H 0.07 -0.38 7.76 -2.39 -0.02 -0.40 16 37 H 0.08 -0.77 8.14 -2.39 -0.02 -0.79 16 38 H 0.20 -1.47 8.06 -2.91 -0.02 -1.49 16 39 H 0.16 0.35 8.06 -2.91 -0.02 0.32 16 40 H 0.43 -2.48 8.78 -92.71 -0.81 -3.30 16 41 H 0.06 -0.17 8.14 -2.38 -0.02 -0.19 16 42 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 43 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 44 H 0.05 0.03 8.14 -2.39 -0.02 0.01 16 Total: 0.00 -29.62 394.01 -2.69 -32.31 By element: Atomic # 1 Polarization: -23.80 SS G_CDS: -0.99 Total: -24.79 kcal Atomic # 6 Polarization: 7.46 SS G_CDS: 5.06 Total: 12.51 kcal Atomic # 7 Polarization: 4.64 SS G_CDS: -5.60 Total: -0.96 kcal Atomic # 8 Polarization: -12.23 SS G_CDS: -2.07 Total: -14.30 kcal Atomic # 14 Polarization: -4.72 SS G_CDS: 2.12 Total: -2.60 kcal Atomic # 16 Polarization: -0.97 SS G_CDS: -1.14 Total: -2.11 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -0.07 Total: -0.07 kcal Total: -29.62 -2.69 -32.31 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13431040.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.590 kcal (2) G-P(sol) polarization free energy of solvation -29.617 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.207 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.693 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.310 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.901 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds