Wall clock time and date at job start Sat Mar 6 2021 19:58:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86304 * 109.47352 * 2 1 4 4 C 1.50706 * 109.47064 * 240.00610 * 2 1 3 5 5 C 1.34173 * 125.43217 * 299.96917 * 4 2 1 6 6 C 1.47023 * 105.95145 * 179.97438 * 5 4 2 7 7 C 1.47382 * 127.18960 * 180.26653 * 6 5 4 8 8 O 1.21612 * 120.00530 * 359.70351 * 7 6 5 9 9 N 1.34780 * 119.99797 * 179.70849 * 7 6 5 10 10 C 1.46497 * 119.99994 * 179.97438 * 9 7 6 11 11 H 1.08999 * 109.47160 * 324.99979 * 10 9 7 12 12 C 1.53003 * 109.47002 * 85.00191 * 10 9 7 13 13 C 1.52997 * 109.47270 * 180.02562 * 12 10 9 14 14 C 1.52998 * 109.47138 * 300.00004 * 13 12 10 15 15 H 1.08999 * 109.46883 * 299.99789 * 14 13 12 16 16 C 1.50703 * 109.47595 * 179.97438 * 14 13 12 17 17 N 1.30636 * 119.25167 * 265.00134 * 16 14 13 18 18 C 1.33521 * 121.50008 * 179.97438 * 17 16 14 19 19 C 1.36194 * 119.91493 * 0.02562 * 18 17 16 20 20 C 1.41031 * 118.59160 * 359.97438 * 19 18 17 21 21 O 1.21980 * 120.70740 * 180.02562 * 20 19 18 22 22 N 1.34751 * 119.25303 * 84.72073 * 16 14 13 23 23 C 1.53001 * 109.47381 * 60.00006 * 14 13 12 24 24 C 1.52994 * 109.47358 * 204.99775 * 10 9 7 25 25 C 1.36415 * 105.61588 * 0.02562 * 6 5 4 26 26 O 1.33646 * 108.39797 * 359.97438 * 25 6 5 27 27 H 0.96697 * 114.00528 * 59.99857 * 1 2 3 28 28 H 1.09005 * 109.47654 * 120.00285 * 2 1 3 29 29 H 1.48501 * 110.00140 * 298.68802 * 3 2 1 30 30 H 1.48503 * 109.99817 * 60.00057 * 3 2 1 31 31 H 1.08005 * 127.02639 * 0.02562 * 5 4 2 32 32 H 0.96999 * 120.00179 * 0.02562 * 9 7 6 33 33 H 1.09002 * 109.47101 * 299.99729 * 12 10 9 34 34 H 1.08999 * 109.47336 * 59.99897 * 12 10 9 35 35 H 1.09001 * 109.47597 * 179.97438 * 13 12 10 36 36 H 1.08999 * 109.47061 * 59.99684 * 13 12 10 37 37 H 1.08000 * 120.04189 * 180.02562 * 18 17 16 38 38 H 1.07995 * 120.70956 * 180.02562 * 19 18 17 39 39 H 0.97003 * 120.04020 * 0.02562 * 22 16 14 40 40 H 1.08998 * 109.46990 * 180.02562 * 23 14 13 41 41 H 1.08999 * 109.47289 * 60.00032 * 23 14 13 42 42 H 1.09002 * 109.47598 * 300.00821 * 24 10 9 43 43 H 1.09008 * 109.47221 * 60.00258 * 24 10 9 44 44 H 1.08003 * 125.79830 * 180.02562 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 1.6757 -1.9882 -1.5499 6 6 2.3681 -2.2326 -2.8237 7 6 2.3925 -3.4863 -3.5981 8 8 1.7977 -4.4652 -3.1896 9 7 3.0742 -3.5480 -4.7592 10 6 3.0990 -4.7943 -5.5287 11 1 3.1041 -5.6433 -4.8452 12 6 1.8592 -4.8666 -6.4224 13 6 1.8847 -6.1685 -7.2257 14 6 3.1430 -6.2068 -8.0951 15 1 3.1381 -5.3580 -8.7790 16 6 3.1685 -7.4894 -8.8859 17 7 3.8321 -8.5136 -8.4197 18 6 3.8842 -9.6714 -9.0828 19 6 3.2363 -9.8020 -10.2736 20 6 2.5199 -8.6964 -10.7769 21 8 1.9252 -8.7708 -11.8393 22 7 2.5017 -7.5556 -10.0550 23 6 4.3828 -6.1345 -7.2015 24 6 4.3572 -4.8319 -6.3982 25 6 2.9787 -1.0549 -3.1416 26 8 2.7055 -0.1656 -2.1820 27 1 -0.3934 0.4417 -0.7650 28 1 1.7924 -0.5139 0.8900 29 1 1.5878 2.4587 -1.2241 30 1 1.5615 2.4679 1.2085 31 1 1.0818 -2.6930 -0.9869 32 1 3.5490 -2.7674 -5.0849 33 1 0.9627 -4.8398 -5.8030 34 1 1.8540 -4.0175 -7.1060 35 1 1.0012 -6.2202 -7.8621 36 1 1.8896 -7.0172 -6.5419 37 1 4.4396 -10.5033 -8.6753 38 1 3.2695 -10.7327 -10.8204 39 1 2.0127 -6.7832 -10.3795 40 1 5.2793 -6.1614 -7.8210 41 1 4.3878 -6.9833 -6.5176 42 1 4.3522 -3.9829 -7.0818 43 1 5.2406 -4.7805 -5.7616 44 1 3.5799 -0.8719 -4.0200 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_13456056.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:58:20 Heat of formation + Delta-G solvation = -47.997679 kcal Electronic energy + Delta-G solvation = -29260.450888 eV Core-core repulsion = 24953.282494 eV Total energy + Delta-G solvation = -4307.168394 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.141 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -43.77056 -42.87571 -41.00412 -39.51250 -38.37793 -38.20468 -35.89667 -35.17576 -34.01906 -32.65245 -32.08577 -31.76123 -30.13486 -26.86701 -26.09225 -25.47952 -24.53842 -23.96785 -22.61869 -22.30190 -21.39031 -20.67252 -19.77268 -19.45318 -19.08173 -18.03483 -17.81098 -17.62687 -17.35154 -17.25410 -16.98535 -16.33924 -16.12381 -15.94405 -15.78521 -15.59701 -15.41286 -15.22209 -14.85197 -14.45365 -14.22391 -14.10501 -14.07764 -13.97568 -13.66702 -13.56584 -13.36379 -12.99853 -12.68959 -12.52293 -12.38123 -12.12838 -12.06868 -11.82746 -11.52068 -11.22827 -11.13173 -11.06644 -10.94956 -10.79610 -10.19445 -9.85740 -9.57617 -5.04610 -0.48243 0.17904 0.77457 0.83874 1.08767 1.42662 1.54554 1.65876 1.87538 1.96780 2.30637 2.53646 2.65661 3.07768 3.22532 3.30936 3.39499 3.48841 3.53425 3.59183 3.73575 3.85275 3.94232 3.96538 4.08807 4.13438 4.21884 4.24153 4.24943 4.32414 4.42829 4.49916 4.54107 4.56067 4.72239 4.78582 4.81673 4.84631 4.90423 4.97944 5.07098 5.17653 5.18693 5.35646 5.41234 5.42222 5.77128 6.18321 6.37362 6.68309 6.78617 7.15576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.036 4.036 3 Si 0.705 3.295 4 C -0.056 4.056 5 C -0.123 4.123 6 C -0.238 4.238 7 C 0.589 3.411 8 O -0.529 6.529 9 N -0.726 5.726 10 C 0.144 3.856 11 H 0.095 0.905 12 C -0.127 4.127 13 C -0.109 4.109 14 C -0.046 4.046 15 H 0.101 0.899 16 C 0.403 3.597 17 N -0.532 5.532 18 C 0.156 3.844 19 C -0.293 4.293 20 C 0.520 3.480 21 O -0.537 6.537 22 N -0.627 5.627 23 C -0.095 4.095 24 C -0.128 4.128 25 C 0.032 3.968 26 O -0.166 6.166 27 H 0.381 0.619 28 H 0.138 0.862 29 H -0.257 1.257 30 H -0.249 1.249 31 H 0.162 0.838 32 H 0.398 0.602 33 H 0.077 0.923 34 H 0.069 0.931 35 H 0.071 0.929 36 H 0.080 0.920 37 H 0.171 0.829 38 H 0.157 0.843 39 H 0.417 0.583 40 H 0.076 0.924 41 H 0.090 0.910 42 H 0.071 0.929 43 H 0.079 0.921 44 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.724 5.567 1.196 8.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.145 4.145 3 Si 0.604 3.396 4 C -0.105 4.105 5 C -0.143 4.143 6 C -0.243 4.243 7 C 0.376 3.624 8 O -0.405 6.405 9 N -0.377 5.377 10 C 0.040 3.960 11 H 0.113 0.887 12 C -0.166 4.166 13 C -0.148 4.148 14 C -0.067 4.067 15 H 0.119 0.881 16 C 0.138 3.862 17 N -0.256 5.256 18 C 0.018 3.982 19 C -0.317 4.317 20 C 0.318 3.682 21 O -0.415 6.415 22 N -0.266 5.266 23 C -0.134 4.134 24 C -0.166 4.166 25 C -0.039 4.039 26 O -0.061 6.061 27 H 0.229 0.771 28 H 0.155 0.845 29 H -0.181 1.181 30 H -0.173 1.173 31 H 0.180 0.820 32 H 0.232 0.768 33 H 0.095 0.905 34 H 0.088 0.912 35 H 0.089 0.911 36 H 0.099 0.901 37 H 0.188 0.812 38 H 0.175 0.825 39 H 0.256 0.744 40 H 0.095 0.905 41 H 0.109 0.891 42 H 0.089 0.911 43 H 0.097 0.903 44 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 5.392 5.321 2.102 7.861 hybrid contribution -1.448 0.023 -1.871 2.366 sum 3.944 5.343 0.230 6.645 Atomic orbital electron populations 1.86682 1.16587 1.80134 1.49210 1.24386 0.84033 1.12249 0.93828 0.94452 0.91242 0.72987 0.80925 1.22682 0.99872 0.94129 0.93777 1.22545 1.01132 0.95428 0.95211 1.21539 1.07809 0.95183 0.99722 1.17267 0.78484 0.86620 0.79992 1.90828 1.43631 1.36697 1.69366 1.45891 1.53818 1.15153 1.22836 1.21056 0.94737 0.87321 0.92861 0.88700 1.21911 0.99077 0.97159 0.98447 1.21564 0.95343 0.99433 0.98449 1.20560 0.98931 0.90361 0.96800 0.88089 1.23198 0.84421 0.96196 0.82409 1.68295 1.23344 0.99951 1.33995 1.22762 0.91429 0.94083 0.89925 1.22978 1.06623 1.01127 1.01010 1.17362 0.82850 0.82957 0.85028 1.91029 1.46231 1.82384 1.21845 1.44769 1.44267 1.17446 1.20072 1.21378 0.95618 0.98143 0.98259 1.21870 0.97445 0.98628 0.98661 1.24467 0.99587 0.87080 0.92768 1.83688 1.54623 1.40016 1.27817 0.77106 0.84460 1.18086 1.17334 0.82038 0.76828 0.90477 0.91241 0.91053 0.90095 0.81219 0.82513 0.74384 0.90541 0.89142 0.91070 0.90260 0.76989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.04 12.86 -35.23 -0.45 -0.50 16 2 C -0.04 0.05 2.98 36.01 0.11 0.16 16 3 Si 0.71 -1.41 32.09 -169.99 -5.45 -6.86 16 4 C -0.06 0.02 6.20 -35.74 -0.22 -0.20 16 5 C -0.12 -0.14 10.88 -37.45 -0.41 -0.55 16 6 C -0.24 -0.01 6.31 -103.27 -0.65 -0.67 16 7 C 0.59 0.66 7.78 -12.54 -0.10 0.57 16 8 O -0.53 -2.89 16.65 5.27 0.09 -2.81 16 9 N -0.73 1.98 5.07 -54.90 -0.28 1.70 16 10 C 0.14 -0.40 2.45 -67.93 -0.17 -0.57 16 11 H 0.09 -0.04 7.58 -51.93 -0.39 -0.43 16 12 C -0.13 0.38 5.49 -26.73 -0.15 0.23 16 13 C -0.11 0.37 5.19 -26.73 -0.14 0.23 16 14 C -0.05 0.19 2.48 -91.77 -0.23 -0.03 16 15 H 0.10 -0.62 8.14 -51.93 -0.42 -1.04 16 16 C 0.40 -0.67 6.73 -155.57 -1.05 -1.72 16 17 N -0.53 0.23 9.11 -10.63 -0.10 0.13 16 18 C 0.16 -0.09 11.20 -17.55 -0.20 -0.29 16 19 C -0.29 -0.32 10.07 -39.26 -0.40 -0.72 16 20 C 0.52 1.56 7.75 -15.09 -0.12 1.45 16 21 O -0.54 -3.89 17.97 4.94 0.09 -3.80 16 22 N -0.63 0.45 5.25 -12.27 -0.06 0.39 16 23 C -0.10 0.39 4.67 -26.70 -0.12 0.27 16 24 C -0.13 0.63 5.39 -26.70 -0.14 0.49 16 25 C 0.03 -0.09 11.61 30.08 0.35 0.26 16 26 O -0.17 0.22 8.89 7.66 0.07 0.29 16 27 H 0.38 -1.06 8.70 45.56 0.40 -0.66 16 28 H 0.14 -0.36 7.96 -51.93 -0.41 -0.77 16 29 H -0.26 -0.13 7.11 56.52 0.40 0.28 16 30 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 31 H 0.16 0.29 8.06 -52.48 -0.42 -0.13 16 32 H 0.40 -2.35 7.57 -40.82 -0.31 -2.66 16 33 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 35 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 36 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 37 H 0.17 -0.56 8.06 -52.49 -0.42 -0.98 16 38 H 0.16 0.03 8.06 -52.49 -0.42 -0.39 16 39 H 0.42 -1.22 8.78 -40.82 -0.36 -1.58 16 40 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 41 H 0.09 -0.24 7.75 -51.93 -0.40 -0.65 16 42 H 0.07 -0.44 8.14 -51.93 -0.42 -0.86 16 43 H 0.08 -0.38 8.14 -51.92 -0.42 -0.80 16 44 H 0.21 -1.61 7.47 -52.48 -0.39 -2.01 16 LS Contribution 374.41 15.07 5.64 5.64 Total: 0.00 -12.78 374.41 -9.81 -22.59 By element: Atomic # 1 Polarization: -9.95 SS G_CDS: -5.72 Total: -15.67 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: -3.63 Total: -1.10 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -0.44 Total: 2.22 kcal Atomic # 8 Polarization: -6.60 SS G_CDS: -0.21 Total: -6.81 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.45 Total: -6.86 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -12.78 -9.81 -22.59 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13456056.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.411 kcal (2) G-P(sol) polarization free energy of solvation -12.779 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.190 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.808 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.587 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.998 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds