Wall clock time and date at job start Sat Mar 6 2021 19:58:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.37880 * 126.45582 * 2 1 4 4 C 1.46684 * 126.22993 * 359.92523 * 3 2 1 5 5 O 1.21690 * 120.00041 * 0.02562 * 4 3 2 6 6 N 1.34778 * 119.99666 * 179.97438 * 4 3 2 7 7 C 1.46499 * 119.99771 * 179.97438 * 6 4 3 8 8 H 1.08992 * 109.47397 * 325.00275 * 7 6 4 9 9 C 1.53002 * 109.46799 * 85.00174 * 7 6 4 10 10 C 1.52997 * 109.46817 * 179.97438 * 9 7 6 11 11 C 1.53005 * 109.47452 * 300.00239 * 10 9 7 12 12 H 1.09002 * 109.46935 * 300.00125 * 11 10 9 13 13 C 1.50703 * 109.47304 * 180.02562 * 11 10 9 14 14 N 1.30636 * 119.25300 * 334.72651 * 13 11 10 15 15 C 1.33517 * 121.50568 * 179.76061 * 14 13 11 16 16 C 1.36208 * 119.90581 * 0.50974 * 15 14 13 17 17 C 1.41017 * 118.59334 * 359.75447 * 16 15 14 18 18 O 1.21983 * 120.70495 * 179.97438 * 17 16 15 19 19 N 1.34745 * 119.24972 * 154.99654 * 13 11 10 20 20 C 1.52999 * 109.47159 * 59.99536 * 11 10 9 21 21 C 1.52997 * 109.47317 * 300.00546 * 20 11 10 22 22 N 1.37647 * 107.53436 * 180.18992 * 3 2 1 23 23 C 1.35538 * 108.64077 * 359.62446 * 22 3 2 24 24 C 1.50701 * 125.55856 * 180.11103 * 23 22 3 25 25 O 1.42901 * 109.47531 * 300.28757 * 24 23 22 26 26 Si 1.86307 * 109.46791 * 180.28336 * 24 23 22 27 27 C 1.35448 * 108.87235 * 0.37753 * 23 22 3 28 28 H 1.09002 * 109.46763 * 90.00517 * 1 2 3 29 29 H 1.08997 * 109.46827 * 209.99988 * 1 2 3 30 30 H 1.08991 * 109.47083 * 330.00091 * 1 2 3 31 31 H 0.97006 * 119.99662 * 0.02562 * 6 4 3 32 32 H 1.08993 * 109.47662 * 299.99952 * 9 7 6 33 33 H 1.09002 * 109.47075 * 60.00457 * 9 7 6 34 34 H 1.09002 * 109.47153 * 60.00231 * 10 9 7 35 35 H 1.09001 * 109.47289 * 180.02562 * 10 9 7 36 36 H 1.07992 * 120.05055 * 180.26461 * 15 14 13 37 37 H 1.08004 * 120.69975 * 179.72990 * 16 15 14 38 38 H 0.97002 * 120.04945 * 359.95843 * 19 13 11 39 39 H 1.08996 * 109.46929 * 179.97438 * 20 11 10 40 40 H 1.09002 * 109.46716 * 60.00455 * 20 11 10 41 41 H 1.09002 * 109.47153 * 299.99641 * 21 20 11 42 42 H 1.09001 * 109.46832 * 179.97438 * 21 20 11 43 43 H 0.96993 * 125.67814 * 179.74215 * 22 3 2 44 44 H 1.09003 * 109.47249 * 60.29110 * 24 23 22 45 45 H 0.96707 * 113.99220 * 300.00120 * 25 24 23 46 46 H 1.48500 * 109.99659 * 179.97438 * 26 24 23 47 47 H 1.48495 * 110.00369 * 301.32314 * 26 24 23 48 48 H 1.07999 * 126.06343 * 179.74502 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1090 0.0000 4 6 1.8898 2.5094 -0.0015 5 8 0.7026 2.7766 -0.0025 6 7 2.8036 3.5000 -0.0008 7 6 2.3676 4.8986 -0.0029 8 1 1.4569 4.9945 -0.5940 9 6 2.0933 5.3494 1.4332 10 6 1.6386 6.8103 1.4311 11 6 2.7364 7.6853 0.8227 12 1 3.6471 7.5891 1.4139 13 6 2.2888 9.1243 0.8212 14 7 1.0109 9.3953 0.8135 15 6 0.5644 10.6536 0.8166 16 6 1.4501 11.6885 0.8175 17 6 2.8296 11.3961 0.8203 18 8 3.6564 12.2930 0.8207 19 7 3.2158 10.1022 0.8222 20 6 3.0108 7.2344 -0.6134 21 6 3.4655 5.7736 -0.6112 22 7 3.6284 0.6626 -0.0044 23 6 3.6218 -0.6927 0.0014 24 6 4.8435 -1.5751 0.0017 25 8 5.6242 -1.3081 -1.1651 26 14 4.3184 -3.3626 0.0021 27 6 2.3380 -1.1246 0.0009 28 1 -0.3633 -0.0001 -1.0277 29 1 -0.3633 -0.8900 0.5138 30 1 -0.3633 0.8899 0.5138 31 1 3.7500 3.2869 0.0003 32 1 1.3115 4.7259 1.8668 33 1 3.0041 5.2537 2.0243 34 1 0.7279 6.9065 0.8398 35 1 1.4436 7.1316 2.4542 36 1 -0.4974 10.8508 0.8145 37 1 1.1031 12.7112 0.8156 38 1 4.1593 9.8771 0.8245 39 1 3.7926 7.8581 -1.0469 40 1 2.1002 7.3307 -1.2046 41 1 4.3762 5.6774 -0.0200 42 1 3.6605 5.4523 -1.6344 43 1 4.4190 1.2245 -0.0089 44 1 5.4388 -1.3712 0.8917 45 1 5.1566 -1.4684 -1.9963 46 1 5.5142 -4.2431 0.0017 47 1 3.4792 -3.6453 1.1941 48 1 2.0138 -2.1548 0.0009 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_13940406.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:58:23 Heat of formation + Delta-G solvation = -29.042688 kcal Electronic energy + Delta-G solvation = -31527.753542 eV Core-core repulsion = 27163.588142 eV Total energy + Delta-G solvation = -4364.165400 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.89178 -42.61244 -40.84296 -39.46255 -38.40094 -37.82668 -35.95315 -35.23415 -33.55793 -32.69176 -32.09055 -31.64712 -30.18975 -28.15896 -27.04324 -25.78244 -25.25013 -24.03862 -23.20237 -22.14688 -21.57457 -21.31633 -20.34433 -19.77595 -19.51897 -19.10841 -18.18662 -17.84648 -17.37413 -16.99464 -16.80894 -16.40717 -16.20207 -15.90909 -15.60243 -15.51901 -15.44257 -15.32283 -15.03894 -14.74842 -14.53617 -14.36326 -14.15097 -14.06668 -13.88423 -13.59731 -13.59041 -13.48800 -13.37639 -12.93519 -12.67245 -12.55678 -12.37021 -12.18349 -12.12539 -12.04623 -11.76549 -11.58150 -11.22737 -11.12209 -10.98846 -10.76488 -10.23258 -9.84288 -9.58452 -9.17984 -5.09247 -0.49272 0.34325 0.76760 1.07986 1.49839 1.53335 1.61095 1.80983 1.94583 2.12310 2.34471 2.52696 2.64501 3.22858 3.23405 3.37926 3.39933 3.47714 3.57104 3.73467 3.79102 3.88320 3.94852 4.07124 4.12883 4.15152 4.17273 4.20995 4.22351 4.32462 4.38258 4.49028 4.53924 4.68809 4.72354 4.74992 4.81980 4.84875 4.89235 5.00365 5.01453 5.07237 5.19516 5.21490 5.31625 5.39738 5.41181 5.44181 5.62859 5.88397 6.20520 6.32196 6.40238 6.68116 6.77560 7.11838 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.063 4.063 3 C -0.058 4.058 4 C 0.592 3.408 5 O -0.518 6.518 6 N -0.731 5.731 7 C 0.145 3.855 8 H 0.097 0.903 9 C -0.131 4.131 10 C -0.096 4.096 11 C -0.046 4.046 12 H 0.100 0.900 13 C 0.402 3.598 14 N -0.531 5.531 15 C 0.156 3.844 16 C -0.293 4.293 17 C 0.520 3.480 18 O -0.537 6.537 19 N -0.627 5.627 20 C -0.107 4.107 21 C -0.124 4.124 22 N -0.524 5.524 23 C 0.026 3.974 24 C -0.055 4.055 25 O -0.544 6.544 26 Si 0.720 3.280 27 C -0.201 4.201 28 H 0.070 0.930 29 H 0.064 0.936 30 H 0.081 0.919 31 H 0.393 0.607 32 H 0.077 0.923 33 H 0.064 0.936 34 H 0.090 0.910 35 H 0.073 0.927 36 H 0.171 0.829 37 H 0.157 0.843 38 H 0.417 0.583 39 H 0.073 0.927 40 H 0.082 0.918 41 H 0.072 0.928 42 H 0.078 0.922 43 H 0.416 0.584 44 H 0.115 0.885 45 H 0.383 0.617 46 H -0.253 1.253 47 H -0.252 1.252 48 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.255 -5.213 -1.787 5.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.072 4.072 3 C -0.170 4.170 4 C 0.380 3.620 5 O -0.394 6.394 6 N -0.382 5.382 7 C 0.041 3.959 8 H 0.115 0.885 9 C -0.170 4.170 10 C -0.135 4.135 11 C -0.067 4.067 12 H 0.118 0.882 13 C 0.137 3.863 14 N -0.254 5.254 15 C 0.018 3.982 16 C -0.317 4.317 17 C 0.318 3.682 18 O -0.415 6.415 19 N -0.266 5.266 20 C -0.146 4.146 21 C -0.162 4.162 22 N -0.121 5.121 23 C -0.092 4.092 24 C -0.165 4.165 25 O -0.349 6.349 26 Si 0.620 3.380 27 C -0.225 4.225 28 H 0.089 0.911 29 H 0.083 0.917 30 H 0.100 0.900 31 H 0.226 0.774 32 H 0.096 0.904 33 H 0.083 0.917 34 H 0.108 0.892 35 H 0.092 0.908 36 H 0.188 0.812 37 H 0.175 0.825 38 H 0.256 0.744 39 H 0.092 0.908 40 H 0.101 0.899 41 H 0.091 0.909 42 H 0.097 0.903 43 H 0.253 0.747 44 H 0.132 0.868 45 H 0.231 0.769 46 H -0.178 1.178 47 H -0.177 1.177 48 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 0.638 -5.276 -0.923 5.394 hybrid contribution 2.096 1.498 0.395 2.606 sum 2.734 -3.778 -0.529 4.693 Atomic orbital electron populations 1.20397 0.88822 1.03232 1.02609 1.19947 0.96056 0.90342 1.00812 1.20247 0.83522 0.93562 1.19712 1.17016 0.85889 0.82922 0.76195 1.90849 1.15818 1.83089 1.49621 1.45963 1.09212 1.06325 1.76713 1.21057 0.98687 0.79016 0.97121 0.88547 1.21976 1.02321 0.96295 0.96376 1.21389 0.97775 0.92266 1.02034 1.20557 1.00893 0.85909 0.99307 0.88160 1.23187 0.85319 0.91721 0.86064 1.68302 1.11223 1.22519 1.23384 1.22776 1.01334 0.86719 0.87347 1.22984 0.91677 1.03025 1.14043 1.17360 0.91212 0.81165 0.78456 1.91030 1.55064 1.43828 1.51595 1.44775 1.12450 1.08391 1.60961 1.21535 1.03071 0.95876 0.94151 1.21786 0.98200 0.94083 1.02175 1.41835 1.07124 1.06550 1.56568 1.21090 0.96828 0.83335 1.07978 1.24957 0.91226 1.09030 0.91293 1.86498 1.41522 1.91274 1.15641 0.93987 0.82269 0.72901 0.88856 1.20611 0.90810 0.99123 1.12001 0.91104 0.91673 0.90026 0.77382 0.90394 0.91691 0.89167 0.90817 0.81193 0.82498 0.74420 0.90798 0.89950 0.90916 0.90307 0.74663 0.86757 0.76857 1.17812 1.17673 0.83247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.10 9.83 36.01 0.35 0.25 16 2 C -0.06 -0.09 6.21 -104.16 -0.65 -0.73 16 3 C -0.06 -0.04 7.06 -81.98 -0.58 -0.62 16 4 C 0.59 0.70 7.75 -12.85 -0.10 0.60 16 5 O -0.52 -2.29 14.47 5.20 0.08 -2.21 16 6 N -0.73 1.64 5.07 -55.11 -0.28 1.36 16 7 C 0.15 -0.38 2.45 -67.93 -0.17 -0.55 16 8 H 0.10 -0.05 7.58 -51.93 -0.39 -0.44 16 9 C -0.13 0.33 5.49 -26.73 -0.15 0.18 16 10 C -0.10 0.27 4.67 -26.73 -0.12 0.14 16 11 C -0.05 0.19 2.48 -91.77 -0.23 -0.04 16 12 H 0.10 -0.58 8.14 -51.93 -0.42 -1.00 16 13 C 0.40 -0.63 6.73 -155.57 -1.05 -1.68 16 14 N -0.53 0.10 9.12 -10.63 -0.10 0.00 16 15 C 0.16 -0.07 11.20 -17.55 -0.20 -0.27 16 16 C -0.29 -0.33 10.07 -39.26 -0.40 -0.73 16 17 C 0.52 1.54 7.75 -15.09 -0.12 1.42 16 18 O -0.54 -3.85 17.97 4.93 0.09 -3.76 16 19 N -0.63 0.49 5.25 -12.27 -0.06 0.43 16 20 C -0.11 0.48 5.19 -26.73 -0.14 0.34 16 21 C -0.12 0.60 5.39 -26.73 -0.14 0.46 16 22 N -0.52 0.82 5.99 -5.69 -0.03 0.79 16 23 C 0.03 -0.03 6.47 -81.95 -0.53 -0.56 16 24 C -0.05 0.12 3.08 36.01 0.11 0.23 16 25 O -0.54 1.10 12.88 -35.23 -0.45 0.65 16 26 Si 0.72 -1.87 30.54 -169.99 -5.19 -7.06 16 27 C -0.20 0.06 9.27 -39.98 -0.37 -0.31 16 28 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 29 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 30 H 0.08 0.22 6.49 -51.93 -0.34 -0.12 16 31 H 0.39 -1.84 7.73 -40.82 -0.32 -2.16 16 32 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.06 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.09 -0.13 7.76 -51.93 -0.40 -0.53 16 35 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 36 H 0.17 -0.53 8.06 -52.49 -0.42 -0.95 16 37 H 0.16 0.04 8.06 -52.48 -0.42 -0.39 16 38 H 0.42 -1.29 8.78 -40.82 -0.36 -1.65 16 39 H 0.07 -0.38 8.14 -51.93 -0.42 -0.80 16 40 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 41 H 0.07 -0.43 8.14 -51.93 -0.42 -0.86 16 42 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 43 H 0.42 -1.64 8.19 -40.82 -0.33 -1.98 16 44 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 45 H 0.38 -2.08 8.70 45.56 0.40 -1.68 16 46 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 47 H -0.25 0.01 7.11 56.52 0.40 0.41 16 48 H 0.15 -0.31 6.17 -52.49 -0.32 -0.64 16 LS Contribution 393.48 15.07 5.93 5.93 Total: 0.00 -11.62 393.48 -11.25 -22.86 By element: Atomic # 1 Polarization: -10.36 SS G_CDS: -6.75 Total: -17.12 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: -4.47 Total: -1.86 kcal Atomic # 7 Polarization: 3.05 SS G_CDS: -0.48 Total: 2.57 kcal Atomic # 8 Polarization: -5.04 SS G_CDS: -0.29 Total: -5.33 kcal Atomic # 14 Polarization: -1.87 SS G_CDS: -5.19 Total: -7.06 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -11.62 -11.25 -22.86 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13940406.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.182 kcal (2) G-P(sol) polarization free energy of solvation -11.615 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.246 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.861 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.043 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds