Wall clock time and date at job start Sat Mar 6 2021 19:58:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.37880 * 126.45582 * 2 1 4 4 C 1.46684 * 126.22993 * 359.92523 * 3 2 1 5 5 O 1.21690 * 120.00041 * 0.02562 * 4 3 2 6 6 N 1.34778 * 119.99666 * 179.97438 * 4 3 2 7 7 C 1.46499 * 119.99771 * 179.97438 * 6 4 3 8 8 H 1.08992 * 109.47397 * 325.00275 * 7 6 4 9 9 C 1.53002 * 109.46799 * 85.00174 * 7 6 4 10 10 C 1.52997 * 109.46817 * 179.97438 * 9 7 6 11 11 C 1.53005 * 109.47452 * 300.00239 * 10 9 7 12 12 H 1.09002 * 109.46935 * 300.00125 * 11 10 9 13 13 C 1.50703 * 109.47304 * 180.02562 * 11 10 9 14 14 N 1.30636 * 119.25300 * 334.72651 * 13 11 10 15 15 C 1.33517 * 121.50568 * 179.76061 * 14 13 11 16 16 C 1.36208 * 119.90581 * 0.50974 * 15 14 13 17 17 C 1.41017 * 118.59334 * 359.75447 * 16 15 14 18 18 O 1.21983 * 120.70495 * 179.97438 * 17 16 15 19 19 N 1.34745 * 119.24972 * 154.99654 * 13 11 10 20 20 C 1.52999 * 109.47159 * 59.99536 * 11 10 9 21 21 C 1.52997 * 109.47317 * 300.00546 * 20 11 10 22 22 N 1.37647 * 107.53436 * 180.18992 * 3 2 1 23 23 C 1.35538 * 108.64077 * 359.62446 * 22 3 2 24 24 C 1.50701 * 125.55856 * 180.11103 * 23 22 3 25 25 O 1.42901 * 109.47531 * 300.28757 * 24 23 22 26 26 Si 1.86307 * 109.46791 * 180.28336 * 24 23 22 27 27 C 1.35448 * 108.87235 * 0.37753 * 23 22 3 28 28 H 1.09002 * 109.46763 * 90.00517 * 1 2 3 29 29 H 1.08997 * 109.46827 * 209.99988 * 1 2 3 30 30 H 1.08991 * 109.47083 * 330.00091 * 1 2 3 31 31 H 0.97006 * 119.99662 * 0.02562 * 6 4 3 32 32 H 1.08993 * 109.47662 * 299.99952 * 9 7 6 33 33 H 1.09002 * 109.47075 * 60.00457 * 9 7 6 34 34 H 1.09002 * 109.47153 * 60.00231 * 10 9 7 35 35 H 1.09001 * 109.47289 * 180.02562 * 10 9 7 36 36 H 1.07992 * 120.05055 * 180.26461 * 15 14 13 37 37 H 1.08004 * 120.69975 * 179.72990 * 16 15 14 38 38 H 0.97002 * 120.04945 * 359.95843 * 19 13 11 39 39 H 1.08996 * 109.46929 * 179.97438 * 20 11 10 40 40 H 1.09002 * 109.46716 * 60.00455 * 20 11 10 41 41 H 1.09002 * 109.47153 * 299.99641 * 21 20 11 42 42 H 1.09001 * 109.46832 * 179.97438 * 21 20 11 43 43 H 0.96993 * 125.67814 * 179.74215 * 22 3 2 44 44 H 1.09003 * 109.47249 * 60.29110 * 24 23 22 45 45 H 0.96707 * 113.99220 * 300.00120 * 25 24 23 46 46 H 1.48500 * 109.99659 * 179.97438 * 26 24 23 47 47 H 1.48495 * 110.00369 * 301.32314 * 26 24 23 48 48 H 1.07999 * 126.06343 * 179.74502 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1090 0.0000 4 6 1.8898 2.5094 -0.0015 5 8 0.7026 2.7766 -0.0025 6 7 2.8036 3.5000 -0.0008 7 6 2.3676 4.8986 -0.0029 8 1 1.4569 4.9945 -0.5940 9 6 2.0933 5.3494 1.4332 10 6 1.6386 6.8103 1.4311 11 6 2.7364 7.6853 0.8227 12 1 3.6471 7.5891 1.4139 13 6 2.2888 9.1243 0.8212 14 7 1.0109 9.3953 0.8135 15 6 0.5644 10.6536 0.8166 16 6 1.4501 11.6885 0.8175 17 6 2.8296 11.3961 0.8203 18 8 3.6564 12.2930 0.8207 19 7 3.2158 10.1022 0.8222 20 6 3.0108 7.2344 -0.6134 21 6 3.4655 5.7736 -0.6112 22 7 3.6284 0.6626 -0.0044 23 6 3.6218 -0.6927 0.0014 24 6 4.8435 -1.5751 0.0017 25 8 5.6242 -1.3081 -1.1651 26 14 4.3184 -3.3626 0.0021 27 6 2.3380 -1.1246 0.0009 28 1 -0.3633 -0.0001 -1.0277 29 1 -0.3633 -0.8900 0.5138 30 1 -0.3633 0.8899 0.5138 31 1 3.7500 3.2869 0.0003 32 1 1.3115 4.7259 1.8668 33 1 3.0041 5.2537 2.0243 34 1 0.7279 6.9065 0.8398 35 1 1.4436 7.1316 2.4542 36 1 -0.4974 10.8508 0.8145 37 1 1.1031 12.7112 0.8156 38 1 4.1593 9.8771 0.8245 39 1 3.7926 7.8581 -1.0469 40 1 2.1002 7.3307 -1.2046 41 1 4.3762 5.6774 -0.0200 42 1 3.6605 5.4523 -1.6344 43 1 4.4190 1.2245 -0.0089 44 1 5.4388 -1.3712 0.8917 45 1 5.1566 -1.4684 -1.9963 46 1 5.5142 -4.2431 0.0017 47 1 3.4792 -3.6453 1.1941 48 1 2.0138 -2.1548 0.0009 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_13940406.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:58:22 Heat of formation + Delta-G solvation = -33.165599 kcal Electronic energy + Delta-G solvation = -31527.932325 eV Core-core repulsion = 27163.588142 eV Total energy + Delta-G solvation = -4364.344183 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -42.91494 -42.57161 -40.77339 -39.50048 -38.47280 -37.66446 -35.92654 -35.24632 -33.54341 -32.67371 -31.85672 -31.59364 -30.09460 -28.15767 -26.96771 -25.75187 -25.24771 -23.81975 -23.11213 -22.08253 -21.49304 -21.15985 -20.28023 -19.78154 -19.45407 -19.14570 -18.04457 -17.82312 -17.30694 -17.05560 -16.72688 -16.35312 -16.11247 -15.86224 -15.63234 -15.43109 -15.29335 -15.16752 -14.98888 -14.70663 -14.46131 -14.34994 -14.10987 -14.02998 -13.82110 -13.58997 -13.51023 -13.43257 -13.19039 -12.95319 -12.51662 -12.34691 -12.16370 -12.13728 -12.08944 -11.97867 -11.58434 -11.42556 -11.36795 -11.10861 -11.01406 -10.64898 -10.17605 -9.79584 -9.68172 -9.15863 -4.90372 -0.46939 0.34046 0.66906 1.24431 1.54259 1.55220 1.73500 1.92994 2.04489 2.25051 2.30068 2.49247 2.76537 3.39827 3.48648 3.55852 3.58772 3.63117 3.66473 3.85815 3.97219 4.13448 4.15014 4.17499 4.25069 4.26926 4.34831 4.38229 4.44638 4.48233 4.50912 4.62800 4.74019 4.79343 4.83406 4.87566 4.93021 4.99588 5.04197 5.14924 5.17804 5.21058 5.27555 5.31714 5.33703 5.41129 5.46454 5.52743 5.66525 5.87942 6.34956 6.52966 6.65914 6.68663 6.70362 7.13357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.088 4.088 3 C -0.069 4.069 4 C 0.588 3.412 5 O -0.560 6.560 6 N -0.715 5.715 7 C 0.145 3.855 8 H 0.070 0.930 9 C -0.123 4.123 10 C -0.090 4.090 11 C -0.040 4.040 12 H 0.131 0.869 13 C 0.410 3.590 14 N -0.547 5.547 15 C 0.172 3.828 16 C -0.318 4.318 17 C 0.510 3.490 18 O -0.592 6.592 19 N -0.614 5.614 20 C -0.104 4.104 21 C -0.114 4.114 22 N -0.512 5.512 23 C 0.033 3.967 24 C -0.051 4.051 25 O -0.554 6.554 26 Si 0.798 3.202 27 C -0.209 4.209 28 H 0.069 0.931 29 H 0.075 0.925 30 H 0.060 0.940 31 H 0.408 0.592 32 H 0.049 0.951 33 H 0.082 0.918 34 H 0.072 0.928 35 H 0.070 0.930 36 H 0.196 0.804 37 H 0.159 0.841 38 H 0.429 0.571 39 H 0.089 0.911 40 H 0.068 0.932 41 H 0.097 0.903 42 H 0.082 0.918 43 H 0.428 0.572 44 H 0.117 0.883 45 H 0.399 0.601 46 H -0.295 1.295 47 H -0.286 1.286 48 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.811 -6.070 -2.057 6.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.097 4.097 3 C -0.182 4.182 4 C 0.376 3.624 5 O -0.439 6.439 6 N -0.366 5.366 7 C 0.041 3.959 8 H 0.089 0.911 9 C -0.162 4.162 10 C -0.129 4.129 11 C -0.060 4.060 12 H 0.149 0.851 13 C 0.145 3.855 14 N -0.270 5.270 15 C 0.033 3.967 16 C -0.342 4.342 17 C 0.311 3.689 18 O -0.475 6.475 19 N -0.251 5.251 20 C -0.143 4.143 21 C -0.152 4.152 22 N -0.109 5.109 23 C -0.086 4.086 24 C -0.161 4.161 25 O -0.361 6.361 26 Si 0.702 3.298 27 C -0.234 4.234 28 H 0.088 0.912 29 H 0.094 0.906 30 H 0.079 0.921 31 H 0.244 0.756 32 H 0.068 0.932 33 H 0.101 0.899 34 H 0.091 0.909 35 H 0.088 0.912 36 H 0.213 0.787 37 H 0.176 0.824 38 H 0.270 0.730 39 H 0.107 0.893 40 H 0.086 0.914 41 H 0.116 0.884 42 H 0.101 0.899 43 H 0.268 0.732 44 H 0.135 0.865 45 H 0.249 0.751 46 H -0.223 1.223 47 H -0.213 1.213 48 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 2.242 -6.145 -1.218 6.654 hybrid contribution 1.581 1.632 0.491 2.324 sum 3.823 -4.514 -0.728 5.960 Atomic orbital electron populations 1.20327 0.89301 1.02687 1.02412 1.20163 0.96258 0.91409 1.01861 1.20190 0.84402 0.93271 1.20341 1.17176 0.85701 0.83655 0.75846 1.90829 1.17594 1.83697 1.51744 1.45835 1.09572 1.05958 1.75217 1.21076 0.98829 0.79132 0.96904 0.91137 1.21875 1.02128 0.95774 0.96416 1.21282 0.97636 0.92391 1.01604 1.20670 1.01444 0.83700 1.00173 0.85112 1.23682 0.84885 0.92434 0.84457 1.68391 1.12060 1.22636 1.23937 1.23163 1.02364 0.86133 0.85068 1.23009 0.91282 1.03755 1.16164 1.17632 0.91512 0.81676 0.78128 1.90991 1.56320 1.45500 1.54693 1.44603 1.13411 1.07437 1.59670 1.21525 1.03006 0.96400 0.93409 1.21735 0.97942 0.92905 1.02645 1.41779 1.06814 1.06636 1.55686 1.21250 0.96917 0.83488 1.06926 1.24979 0.90749 1.08749 0.91636 1.86474 1.42000 1.91266 1.16396 0.93002 0.78974 0.70858 0.86917 1.20815 0.90946 0.99486 1.12106 0.91186 0.90568 0.92121 0.75607 0.93167 0.89901 0.90904 0.91164 0.78687 0.82355 0.72979 0.89285 0.91360 0.88449 0.89889 0.73207 0.86526 0.75073 1.22267 1.21308 0.81858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.33 9.83 71.24 0.70 0.37 16 2 C -0.09 -0.29 6.21 -19.56 -0.12 -0.41 16 3 C -0.07 -0.12 7.06 40.35 0.28 0.17 16 4 C 0.59 1.90 7.75 86.45 0.67 2.57 16 5 O -0.56 -6.21 14.47 -4.32 -0.06 -6.27 16 6 N -0.71 3.47 5.07 -446.50 -2.27 1.21 16 7 C 0.14 -0.79 2.45 44.99 0.11 -0.68 16 8 H 0.07 0.03 7.58 -2.39 -0.02 0.01 16 9 C -0.12 0.64 5.49 30.59 0.17 0.81 16 10 C -0.09 0.52 4.67 30.60 0.14 0.66 16 11 C -0.04 0.38 2.48 -11.54 -0.03 0.35 16 12 H 0.13 -1.95 8.14 -2.39 -0.02 -1.97 16 13 C 0.41 -1.60 6.73 138.18 0.93 -0.67 16 14 N -0.55 0.34 9.12 -187.56 -1.71 -1.37 16 15 C 0.17 -0.17 11.20 83.96 0.94 0.77 16 16 C -0.32 -1.00 10.07 22.48 0.23 -0.77 16 17 C 0.51 3.52 7.75 84.88 0.66 4.18 16 18 O -0.59 -9.59 17.97 -5.26 -0.09 -9.69 16 19 N -0.61 1.18 5.25 -310.69 -1.63 -0.45 16 20 C -0.10 1.10 5.19 30.59 0.16 1.26 16 21 C -0.11 1.33 5.39 30.59 0.16 1.50 16 22 N -0.51 2.11 5.99 -171.92 -1.03 1.08 16 23 C 0.03 -0.11 6.47 41.34 0.27 0.15 16 24 C -0.05 0.29 3.08 71.24 0.22 0.51 16 25 O -0.55 3.23 12.88 -148.98 -1.92 1.31 16 26 Si 0.80 -4.54 30.54 68.60 2.10 -2.45 16 27 C -0.21 0.20 9.27 22.01 0.20 0.41 16 28 H 0.07 0.22 8.14 -2.39 -0.02 0.20 16 29 H 0.08 0.04 8.14 -2.39 -0.02 0.03 16 30 H 0.06 0.49 6.49 -2.39 -0.02 0.47 16 31 H 0.41 -4.50 7.73 -92.70 -0.72 -5.21 16 32 H 0.05 0.05 8.14 -2.39 -0.02 0.03 16 33 H 0.08 -0.71 8.14 -2.39 -0.02 -0.73 16 34 H 0.07 -0.13 7.76 -2.39 -0.02 -0.15 16 35 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 36 H 0.20 -1.36 8.06 -2.91 -0.02 -1.38 16 37 H 0.16 0.31 8.06 -2.91 -0.02 0.29 16 38 H 0.43 -3.05 8.78 -92.71 -0.81 -3.86 16 39 H 0.09 -1.13 8.14 -2.39 -0.02 -1.15 16 40 H 0.07 -0.48 8.14 -2.39 -0.02 -0.50 16 41 H 0.10 -1.53 8.14 -2.39 -0.02 -1.55 16 42 H 0.08 -0.95 8.14 -2.39 -0.02 -0.97 16 43 H 0.43 -4.12 8.19 -92.71 -0.76 -4.88 16 44 H 0.12 -0.67 7.96 -2.39 -0.02 -0.69 16 45 H 0.40 -5.09 8.70 -74.05 -0.64 -5.74 16 46 H -0.30 -0.42 7.11 99.48 0.71 0.29 16 47 H -0.29 -0.02 7.11 99.48 0.71 0.69 16 48 H 0.16 -0.78 6.17 -2.91 -0.02 -0.80 16 Total: 0.00 -30.60 393.48 -2.77 -33.38 By element: Atomic # 1 Polarization: -26.08 SS G_CDS: -1.85 Total: -27.93 kcal Atomic # 6 Polarization: 5.48 SS G_CDS: 5.70 Total: 11.18 kcal Atomic # 7 Polarization: 7.11 SS G_CDS: -6.64 Total: 0.47 kcal Atomic # 8 Polarization: -12.57 SS G_CDS: -2.08 Total: -14.65 kcal Atomic # 14 Polarization: -4.54 SS G_CDS: 2.10 Total: -2.45 kcal Total: -30.60 -2.77 -33.38 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_13940406.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.210 kcal (2) G-P(sol) polarization free energy of solvation -30.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.773 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.376 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.166 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds