Wall clock time and date at job start Sat Mar 6 2021 19:58:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86300 * 109.47199 * 2 1 4 4 C 1.50706 * 109.46918 * 240.00245 * 2 1 3 5 5 C 1.34854 * 125.88900 * 119.97621 * 4 2 1 6 6 C 1.40891 * 107.41757 * 180.02562 * 5 4 2 7 7 C 1.34855 * 107.41598 * 0.02562 * 6 5 4 8 8 C 1.50699 * 125.88781 * 180.02562 * 7 6 5 9 9 C 1.50703 * 109.47030 * 274.99714 * 8 7 6 10 10 O 1.21284 * 119.99831 * 359.97438 * 9 8 7 11 11 N 1.34771 * 120.00056 * 180.02562 * 9 8 7 12 12 C 1.46500 * 120.00252 * 179.97438 * 11 9 8 13 13 H 1.08997 * 109.46921 * 35.00177 * 12 11 9 14 14 C 1.52995 * 109.47191 * 154.99970 * 12 11 9 15 15 C 1.52998 * 109.47240 * 180.02562 * 14 12 11 16 16 C 1.53010 * 109.47192 * 299.99942 * 15 14 12 17 17 H 1.09002 * 109.46953 * 300.00333 * 16 15 14 18 18 C 1.50693 * 109.47301 * 179.97438 * 16 15 14 19 19 N 1.30641 * 119.25225 * 334.72353 * 18 16 15 20 20 C 1.33525 * 121.50504 * 179.75539 * 19 18 16 21 21 C 1.36201 * 119.90935 * 0.52276 * 20 19 18 22 22 C 1.41030 * 118.59161 * 359.74823 * 21 20 19 23 23 O 1.21973 * 120.70892 * 179.97438 * 22 21 20 24 24 N 1.34745 * 119.25629 * 155.00401 * 18 16 15 25 25 C 1.53004 * 109.46679 * 59.99617 * 16 15 14 26 26 C 1.52998 * 109.47621 * 300.00120 * 25 16 15 27 27 N 1.36335 * 125.89049 * 299.99887 * 4 2 1 28 28 H 0.96706 * 113.99572 * 60.00004 * 1 2 3 29 29 H 1.09001 * 109.47144 * 120.00812 * 2 1 3 30 30 H 1.48498 * 110.00375 * 298.68402 * 3 2 1 31 31 H 1.48497 * 109.99760 * 60.00094 * 3 2 1 32 32 H 1.07999 * 126.28918 * 359.75937 * 5 4 2 33 33 H 1.08003 * 126.29399 * 179.97438 * 6 5 4 34 34 H 1.08992 * 109.47295 * 35.00052 * 8 7 6 35 35 H 1.09007 * 109.46694 * 154.99788 * 8 7 6 36 36 H 0.97004 * 119.99730 * 0.02562 * 11 9 8 37 37 H 1.09002 * 109.47518 * 300.00139 * 14 12 11 38 38 H 1.09003 * 109.47417 * 60.00386 * 14 12 11 39 39 H 1.09002 * 109.47443 * 59.99975 * 15 14 12 40 40 H 1.09005 * 109.47489 * 180.02562 * 15 14 12 41 41 H 1.08004 * 120.04670 * 180.26376 * 20 19 18 42 42 H 1.07996 * 120.70697 * 179.72455 * 21 20 19 43 43 H 0.96998 * 120.03867 * 359.94867 * 24 18 16 44 44 H 1.09002 * 109.46843 * 60.00649 * 25 16 15 45 45 H 1.09002 * 109.46699 * 180.02562 * 25 16 15 46 46 H 1.08997 * 109.46780 * 300.00764 * 26 25 16 47 47 H 1.08992 * 109.47505 * 179.97438 * 26 25 16 48 48 H 0.96994 * 125.64064 * 359.94232 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.7094 -0.1725 -2.1916 6 6 2.9441 -1.1742 -3.1541 7 6 2.2999 -2.2860 -2.7448 8 6 2.2744 -3.6086 -3.4668 9 6 1.1819 -3.5932 -4.5048 10 8 0.4917 -2.6057 -4.6441 11 7 0.9712 -4.6772 -5.2775 12 6 -0.0912 -4.6625 -6.2861 13 1 -0.1743 -3.6625 -6.7117 14 6 0.2443 -5.6622 -7.3947 15 6 -0.8649 -5.6464 -8.4484 16 6 -2.1935 -6.0348 -7.7963 17 1 -2.1107 -7.0349 -7.3707 18 6 -3.2861 -6.0187 -8.8340 19 7 -3.1518 -5.2623 -9.8906 20 6 -4.0895 -5.2172 -10.8402 21 6 -5.2218 -5.9633 -10.7125 22 6 -5.3693 -6.7758 -9.5692 23 8 -6.3678 -7.4593 -9.4154 24 7 -4.3820 -6.7804 -8.6482 25 6 -2.5288 -5.0351 -6.6876 26 6 -1.4197 -5.0508 -5.6339 27 7 1.6770 -2.0076 -1.5643 28 1 -0.3933 0.4417 -0.7651 29 1 1.7923 -0.5140 0.8899 30 1 1.5879 2.4586 -1.2242 31 1 1.5615 2.4678 1.2085 32 1 3.0806 0.8413 -2.2206 33 1 3.5312 -1.0706 -4.0547 34 1 3.2353 -3.7756 -3.9532 35 1 2.0850 -4.4092 -2.7518 36 1 1.5226 -5.4674 -5.1652 37 1 1.1905 -5.3853 -7.8596 38 1 0.3274 -6.6623 -6.9692 39 1 -0.9477 -4.6463 -8.8739 40 1 -0.6262 -6.3590 -9.2380 41 1 -3.9523 -4.5866 -11.7062 42 1 -5.9904 -5.9332 -11.4705 43 1 -4.4613 -7.3316 -7.8541 44 1 -2.6116 -4.0350 -7.1132 45 1 -3.4751 -5.3120 -6.2228 46 1 -1.3369 -6.0510 -5.2086 47 1 -1.6583 -4.3383 -4.8444 48 1 1.1416 -2.6296 -1.0475 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_14644196.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:58:27 Heat of formation + Delta-G solvation = -26.002771 kcal Electronic energy + Delta-G solvation = -31203.121316 eV Core-core repulsion = 26839.087736 eV Total energy + Delta-G solvation = -4364.033580 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.88613 -42.30605 -41.00451 -39.56906 -38.41166 -37.76468 -35.88593 -35.13796 -33.36423 -32.39169 -32.05709 -31.86318 -30.41293 -29.11801 -26.02237 -25.46887 -24.92199 -23.97532 -22.95102 -21.73021 -21.33503 -21.23650 -20.81774 -19.77784 -19.15426 -18.96961 -18.16700 -17.84065 -17.55996 -17.01272 -16.78436 -16.41645 -16.36249 -16.02343 -15.63191 -15.57649 -15.43834 -15.15316 -15.01131 -14.60086 -14.45653 -14.39597 -14.08879 -14.02631 -13.99454 -13.74900 -13.65852 -13.54907 -13.35854 -12.84204 -12.66564 -12.51447 -12.38398 -12.12053 -12.07677 -11.82195 -11.75164 -11.52485 -11.22556 -11.13696 -10.87991 -10.76862 -10.15300 -9.72231 -9.58462 -8.91148 -4.88193 -0.49179 0.76567 1.11414 1.32689 1.53697 1.59973 1.71023 1.87573 1.98760 2.24797 2.48586 2.52880 2.65467 3.22275 3.37616 3.38034 3.47891 3.58193 3.60943 3.73338 3.83462 3.86677 3.93575 3.97954 3.99671 4.09277 4.14159 4.21120 4.23840 4.32450 4.40690 4.45995 4.49102 4.55798 4.59276 4.76801 4.79995 4.81807 4.83927 4.89663 4.96521 5.05648 5.18785 5.31505 5.35185 5.36787 5.40857 5.41757 6.03686 6.18983 6.38387 6.40203 6.65324 6.67445 6.77682 7.18346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.055 4.055 3 Si 0.714 3.286 4 C -0.009 4.009 5 C -0.186 4.186 6 C -0.173 4.173 7 C 0.036 3.964 8 C -0.073 4.073 9 C 0.512 3.488 10 O -0.521 6.521 11 N -0.731 5.731 12 C 0.143 3.857 13 H 0.093 0.907 14 C -0.128 4.128 15 C -0.096 4.096 16 C -0.046 4.046 17 H 0.101 0.899 18 C 0.403 3.597 19 N -0.532 5.532 20 C 0.156 3.844 21 C -0.293 4.293 22 C 0.520 3.480 23 O -0.537 6.537 24 N -0.627 5.627 25 C -0.109 4.109 26 C -0.126 4.126 27 N -0.536 5.536 28 H 0.379 0.621 29 H 0.114 0.886 30 H -0.257 1.257 31 H -0.258 1.258 32 H 0.141 0.859 33 H 0.136 0.864 34 H 0.118 0.882 35 H 0.099 0.901 36 H 0.401 0.599 37 H 0.078 0.922 38 H 0.070 0.930 39 H 0.089 0.911 40 H 0.076 0.924 41 H 0.171 0.829 42 H 0.157 0.843 43 H 0.417 0.583 44 H 0.080 0.920 45 H 0.070 0.930 46 H 0.068 0.932 47 H 0.074 0.926 48 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.013 -2.840 0.862 8.545 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.165 4.165 3 Si 0.613 3.387 4 C -0.122 4.122 5 C -0.211 4.211 6 C -0.197 4.197 7 C -0.078 4.078 8 C -0.113 4.113 9 C 0.297 3.703 10 O -0.396 6.396 11 N -0.383 5.383 12 C 0.039 3.961 13 H 0.111 0.889 14 C -0.166 4.166 15 C -0.134 4.134 16 C -0.066 4.066 17 H 0.119 0.881 18 C 0.138 3.862 19 N -0.256 5.256 20 C 0.018 3.982 21 C -0.317 4.317 22 C 0.318 3.682 23 O -0.415 6.415 24 N -0.266 5.266 25 C -0.148 4.148 26 C -0.165 4.165 27 N -0.130 5.130 28 H 0.228 0.772 29 H 0.132 0.868 30 H -0.181 1.181 31 H -0.183 1.183 32 H 0.159 0.841 33 H 0.154 0.846 34 H 0.136 0.864 35 H 0.117 0.883 36 H 0.235 0.765 37 H 0.097 0.903 38 H 0.089 0.911 39 H 0.108 0.892 40 H 0.094 0.906 41 H 0.188 0.812 42 H 0.175 0.825 43 H 0.256 0.744 44 H 0.098 0.902 45 H 0.089 0.911 46 H 0.087 0.913 47 H 0.093 0.907 48 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 7.211 -1.502 1.065 7.442 hybrid contribution -1.950 -1.759 -0.005 2.626 sum 5.261 -3.261 1.060 6.279 Atomic orbital electron populations 1.86562 1.17963 1.80229 1.49647 1.24779 0.83752 1.11434 0.96486 0.94437 0.91420 0.72582 0.80216 1.20779 1.05850 0.85430 1.00164 1.20654 1.04540 1.00019 0.95882 1.20589 1.05769 0.92318 1.01041 1.19481 1.02364 0.96472 0.89467 1.20142 0.99807 0.94711 0.96658 1.20615 0.84896 0.82799 0.81970 1.90775 1.47822 1.32667 1.68301 1.46071 1.36811 1.17206 1.38191 1.21020 0.86173 1.01090 0.87816 0.88932 1.21850 0.99580 0.99303 0.95829 1.21375 0.90464 1.04533 0.97060 1.20555 0.91864 1.02021 0.92177 0.88117 1.23196 0.86062 0.83896 0.93082 1.68296 1.31556 1.22961 1.02771 1.22768 0.87521 0.92577 0.95336 1.22980 1.03140 1.04399 1.01214 1.17362 0.82683 0.84150 0.84000 1.91028 1.28409 1.44244 1.77798 1.44771 1.18038 1.39597 1.24156 1.21564 0.98929 0.99649 0.94647 1.21895 0.93977 1.02458 0.98153 1.41780 1.41032 1.10996 1.19225 0.77235 0.86776 1.18138 1.18341 0.84103 0.84577 0.86439 0.88271 0.76523 0.90303 0.91112 0.89192 0.90579 0.81208 0.82502 0.74397 0.90157 0.91138 0.91323 0.90717 0.75150 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.00 12.88 -35.23 -0.45 -1.45 16 2 C -0.06 -0.01 3.08 36.01 0.11 0.10 16 3 Si 0.71 -0.38 30.58 -169.99 -5.20 -5.58 16 4 C -0.01 -0.01 6.50 -81.79 -0.53 -0.54 16 5 C -0.19 -0.29 9.37 -39.78 -0.37 -0.66 16 6 C -0.17 -0.29 10.77 -39.78 -0.43 -0.72 16 7 C 0.04 0.02 5.66 -81.79 -0.46 -0.44 16 8 C -0.07 0.20 6.24 -29.03 -0.18 0.02 16 9 C 0.51 -0.26 7.79 -10.99 -0.09 -0.34 16 10 O -0.52 -2.25 15.70 5.55 0.09 -2.16 16 11 N -0.73 2.51 5.08 -53.81 -0.27 2.24 16 12 C 0.14 -0.42 2.45 -67.93 -0.17 -0.59 16 13 H 0.09 -0.03 7.58 -51.93 -0.39 -0.42 16 14 C -0.13 0.61 5.39 -26.73 -0.14 0.47 16 15 C -0.10 0.37 4.68 -26.73 -0.12 0.25 16 16 C -0.05 0.18 2.48 -91.77 -0.23 -0.04 16 17 H 0.10 -0.60 8.14 -51.93 -0.42 -1.02 16 18 C 0.40 -0.61 6.73 -155.57 -1.05 -1.66 16 19 N -0.53 0.15 9.12 -10.63 -0.10 0.05 16 20 C 0.16 -0.07 11.20 -17.55 -0.20 -0.27 16 21 C -0.29 -0.35 10.07 -39.26 -0.40 -0.75 16 22 C 0.52 1.62 7.75 -15.09 -0.12 1.50 16 23 O -0.54 -3.93 17.97 4.94 0.09 -3.84 16 24 N -0.63 0.37 5.25 -12.27 -0.06 0.31 16 25 C -0.11 0.36 5.18 -26.73 -0.14 0.22 16 26 C -0.13 0.38 5.50 -26.73 -0.15 0.23 16 27 N -0.54 -0.33 6.07 -5.43 -0.03 -0.37 16 28 H 0.38 -0.05 8.70 45.56 0.40 0.34 16 29 H 0.11 -0.10 7.96 -51.93 -0.41 -0.51 16 30 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 31 H -0.26 -0.63 7.11 56.52 0.40 -0.22 16 32 H 0.14 0.00 6.22 -52.49 -0.33 -0.33 16 33 H 0.14 0.08 8.06 -52.48 -0.42 -0.34 16 34 H 0.12 -0.57 8.14 -51.93 -0.42 -0.99 16 35 H 0.10 -0.49 8.14 -51.93 -0.42 -0.92 16 36 H 0.40 -2.52 8.60 -40.82 -0.35 -2.87 16 37 H 0.08 -0.36 8.14 -51.93 -0.42 -0.79 16 38 H 0.07 -0.42 8.14 -51.93 -0.42 -0.84 16 39 H 0.09 -0.22 7.75 -51.93 -0.40 -0.62 16 40 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 41 H 0.17 -0.54 8.06 -52.48 -0.42 -0.97 16 42 H 0.16 0.05 8.06 -52.49 -0.42 -0.38 16 43 H 0.42 -1.17 8.78 -40.82 -0.36 -1.53 16 44 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 45 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 46 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 47 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 48 H 0.41 -0.40 8.96 -40.82 -0.37 -0.77 16 LS Contribution 397.85 15.07 6.00 6.00 Total: 0.00 -12.93 397.85 -11.51 -24.44 By element: Atomic # 1 Polarization: -9.48 SS G_CDS: -6.91 Total: -16.39 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -4.66 Total: -3.24 kcal Atomic # 7 Polarization: 2.70 SS G_CDS: -0.47 Total: 2.23 kcal Atomic # 8 Polarization: -7.18 SS G_CDS: -0.28 Total: -7.46 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.20 Total: -5.58 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -12.93 -11.51 -24.44 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_14644196.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.558 kcal (2) G-P(sol) polarization free energy of solvation -12.931 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.489 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.445 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.003 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds