Wall clock time and date at job start Sat Mar 6 2021 19:58:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86300 * 109.47199 * 2 1 4 4 C 1.50706 * 109.46918 * 240.00245 * 2 1 3 5 5 C 1.34854 * 125.88900 * 119.97621 * 4 2 1 6 6 C 1.40891 * 107.41757 * 180.02562 * 5 4 2 7 7 C 1.34855 * 107.41598 * 0.02562 * 6 5 4 8 8 C 1.50699 * 125.88781 * 180.02562 * 7 6 5 9 9 C 1.50703 * 109.47030 * 274.99714 * 8 7 6 10 10 O 1.21284 * 119.99831 * 359.97438 * 9 8 7 11 11 N 1.34771 * 120.00056 * 180.02562 * 9 8 7 12 12 C 1.46500 * 120.00252 * 179.97438 * 11 9 8 13 13 H 1.08997 * 109.46921 * 35.00177 * 12 11 9 14 14 C 1.52995 * 109.47191 * 154.99970 * 12 11 9 15 15 C 1.52998 * 109.47240 * 180.02562 * 14 12 11 16 16 C 1.53010 * 109.47192 * 299.99942 * 15 14 12 17 17 H 1.09002 * 109.46953 * 300.00333 * 16 15 14 18 18 C 1.50693 * 109.47301 * 179.97438 * 16 15 14 19 19 N 1.30641 * 119.25225 * 334.72353 * 18 16 15 20 20 C 1.33525 * 121.50504 * 179.75539 * 19 18 16 21 21 C 1.36201 * 119.90935 * 0.52276 * 20 19 18 22 22 C 1.41030 * 118.59161 * 359.74823 * 21 20 19 23 23 O 1.21973 * 120.70892 * 179.97438 * 22 21 20 24 24 N 1.34745 * 119.25629 * 155.00401 * 18 16 15 25 25 C 1.53004 * 109.46679 * 59.99617 * 16 15 14 26 26 C 1.52998 * 109.47621 * 300.00120 * 25 16 15 27 27 N 1.36335 * 125.89049 * 299.99887 * 4 2 1 28 28 H 0.96706 * 113.99572 * 60.00004 * 1 2 3 29 29 H 1.09001 * 109.47144 * 120.00812 * 2 1 3 30 30 H 1.48498 * 110.00375 * 298.68402 * 3 2 1 31 31 H 1.48497 * 109.99760 * 60.00094 * 3 2 1 32 32 H 1.07999 * 126.28918 * 359.75937 * 5 4 2 33 33 H 1.08003 * 126.29399 * 179.97438 * 6 5 4 34 34 H 1.08992 * 109.47295 * 35.00052 * 8 7 6 35 35 H 1.09007 * 109.46694 * 154.99788 * 8 7 6 36 36 H 0.97004 * 119.99730 * 0.02562 * 11 9 8 37 37 H 1.09002 * 109.47518 * 300.00139 * 14 12 11 38 38 H 1.09003 * 109.47417 * 60.00386 * 14 12 11 39 39 H 1.09002 * 109.47443 * 59.99975 * 15 14 12 40 40 H 1.09005 * 109.47489 * 180.02562 * 15 14 12 41 41 H 1.08004 * 120.04670 * 180.26376 * 20 19 18 42 42 H 1.07996 * 120.70697 * 179.72455 * 21 20 19 43 43 H 0.96998 * 120.03867 * 359.94867 * 24 18 16 44 44 H 1.09002 * 109.46843 * 60.00649 * 25 16 15 45 45 H 1.09002 * 109.46699 * 180.02562 * 25 16 15 46 46 H 1.08997 * 109.46780 * 300.00764 * 26 25 16 47 47 H 1.08992 * 109.47505 * 179.97438 * 26 25 16 48 48 H 0.96994 * 125.64064 * 359.94232 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.7094 -0.1725 -2.1916 6 6 2.9441 -1.1742 -3.1541 7 6 2.2999 -2.2860 -2.7448 8 6 2.2744 -3.6086 -3.4668 9 6 1.1819 -3.5932 -4.5048 10 8 0.4917 -2.6057 -4.6441 11 7 0.9712 -4.6772 -5.2775 12 6 -0.0912 -4.6625 -6.2861 13 1 -0.1743 -3.6625 -6.7117 14 6 0.2443 -5.6622 -7.3947 15 6 -0.8649 -5.6464 -8.4484 16 6 -2.1935 -6.0348 -7.7963 17 1 -2.1107 -7.0349 -7.3707 18 6 -3.2861 -6.0187 -8.8340 19 7 -3.1518 -5.2623 -9.8906 20 6 -4.0895 -5.2172 -10.8402 21 6 -5.2218 -5.9633 -10.7125 22 6 -5.3693 -6.7758 -9.5692 23 8 -6.3678 -7.4593 -9.4154 24 7 -4.3820 -6.7804 -8.6482 25 6 -2.5288 -5.0351 -6.6876 26 6 -1.4197 -5.0508 -5.6339 27 7 1.6770 -2.0076 -1.5643 28 1 -0.3933 0.4417 -0.7651 29 1 1.7923 -0.5140 0.8899 30 1 1.5879 2.4586 -1.2242 31 1 1.5615 2.4678 1.2085 32 1 3.0806 0.8413 -2.2206 33 1 3.5312 -1.0706 -4.0547 34 1 3.2353 -3.7756 -3.9532 35 1 2.0850 -4.4092 -2.7518 36 1 1.5226 -5.4674 -5.1652 37 1 1.1905 -5.3853 -7.8596 38 1 0.3274 -6.6623 -6.9692 39 1 -0.9477 -4.6463 -8.8739 40 1 -0.6262 -6.3590 -9.2380 41 1 -3.9523 -4.5866 -11.7062 42 1 -5.9904 -5.9332 -11.4705 43 1 -4.4613 -7.3316 -7.8541 44 1 -2.6116 -4.0350 -7.1132 45 1 -3.4751 -5.3120 -6.2228 46 1 -1.3369 -6.0510 -5.2086 47 1 -1.6583 -4.3383 -4.8444 48 1 1.1416 -2.6296 -1.0475 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_14644196.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:58:26 Heat of formation + Delta-G solvation = -31.691916 kcal Electronic energy + Delta-G solvation = -31203.368016 eV Core-core repulsion = 26839.087736 eV Total energy + Delta-G solvation = -4364.280280 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.91861 -42.30886 -40.90226 -39.56434 -38.48333 -37.84986 -35.84338 -35.11527 -33.29888 -32.36581 -31.89837 -31.79736 -30.34896 -29.04439 -25.97724 -25.49210 -24.91253 -23.73263 -22.84326 -21.64559 -21.34095 -21.14472 -20.70462 -19.79242 -19.20093 -19.00523 -18.03850 -17.81068 -17.49951 -17.08611 -16.75803 -16.40945 -16.31384 -15.97920 -15.65559 -15.51283 -15.26652 -15.10796 -14.94172 -14.59878 -14.45631 -14.33193 -14.09581 -14.05797 -13.91419 -13.83954 -13.50125 -13.40892 -13.17378 -12.73997 -12.49344 -12.33702 -12.18923 -12.12867 -12.04982 -11.86539 -11.60374 -11.39933 -11.31552 -11.10668 -10.87361 -10.83207 -10.00654 -9.77451 -9.68987 -8.93797 -4.88555 -0.47704 0.65737 1.10126 1.32064 1.53911 1.67192 1.69160 1.87585 1.94721 2.34717 2.48032 2.53455 2.77192 3.36797 3.40054 3.55783 3.63557 3.70840 3.73436 3.82250 3.97955 4.06964 4.15558 4.20440 4.25597 4.28882 4.36906 4.40209 4.44942 4.48419 4.51246 4.53370 4.65109 4.69631 4.82377 4.83500 4.86689 5.01304 5.06763 5.16297 5.23002 5.27866 5.31298 5.32018 5.33345 5.44702 5.47479 5.61263 6.00472 6.15337 6.37679 6.60659 6.64495 6.68911 6.71209 7.35242 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.061 4.061 3 Si 0.797 3.203 4 C -0.020 4.020 5 C -0.202 4.202 6 C -0.201 4.201 7 C 0.035 3.965 8 C -0.068 4.068 9 C 0.510 3.490 10 O -0.578 6.578 11 N -0.713 5.713 12 C 0.143 3.857 13 H 0.060 0.940 14 C -0.116 4.116 15 C -0.093 4.093 16 C -0.039 4.039 17 H 0.133 0.867 18 C 0.409 3.591 19 N -0.545 5.545 20 C 0.173 3.827 21 C -0.319 4.319 22 C 0.509 3.491 23 O -0.593 6.593 24 N -0.615 5.615 25 C -0.105 4.105 26 C -0.119 4.119 27 N -0.536 5.536 28 H 0.385 0.615 29 H 0.128 0.872 30 H -0.293 1.293 31 H -0.297 1.297 32 H 0.149 0.851 33 H 0.140 0.860 34 H 0.144 0.856 35 H 0.129 0.871 36 H 0.419 0.581 37 H 0.081 0.919 38 H 0.096 0.904 39 H 0.071 0.929 40 H 0.082 0.918 41 H 0.198 0.802 42 H 0.159 0.841 43 H 0.428 0.572 44 H 0.059 0.941 45 H 0.075 0.925 46 H 0.091 0.909 47 H 0.046 0.954 48 H 0.418 0.582 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.913 -4.657 1.131 11.010 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.170 4.170 3 Si 0.701 3.299 4 C -0.133 4.133 5 C -0.227 4.227 6 C -0.226 4.226 7 C -0.079 4.079 8 C -0.108 4.108 9 C 0.297 3.703 10 O -0.457 6.457 11 N -0.366 5.366 12 C 0.039 3.961 13 H 0.078 0.922 14 C -0.154 4.154 15 C -0.132 4.132 16 C -0.059 4.059 17 H 0.151 0.849 18 C 0.144 3.856 19 N -0.268 5.268 20 C 0.033 3.967 21 C -0.343 4.343 22 C 0.310 3.690 23 O -0.476 6.476 24 N -0.252 5.252 25 C -0.144 4.144 26 C -0.157 4.157 27 N -0.132 5.132 28 H 0.234 0.766 29 H 0.145 0.855 30 H -0.220 1.220 31 H -0.225 1.225 32 H 0.167 0.833 33 H 0.158 0.842 34 H 0.162 0.838 35 H 0.147 0.853 36 H 0.257 0.743 37 H 0.100 0.900 38 H 0.115 0.885 39 H 0.090 0.910 40 H 0.100 0.900 41 H 0.215 0.785 42 H 0.176 0.824 43 H 0.269 0.731 44 H 0.078 0.922 45 H 0.093 0.907 46 H 0.110 0.890 47 H 0.065 0.935 48 H 0.256 0.744 Dipole moment (debyes) X Y Z Total from point charges 9.176 -3.380 1.357 9.872 hybrid contribution -2.483 -1.120 -0.105 2.726 sum 6.693 -4.499 1.252 8.161 Atomic orbital electron populations 1.86533 1.18934 1.80536 1.50181 1.24980 0.83026 1.12138 0.96816 0.93453 0.90080 0.70347 0.75987 1.20876 1.06088 0.85887 1.00446 1.20903 1.04981 1.00617 0.96204 1.20844 1.07021 0.93112 1.01599 1.19963 1.01121 0.97593 0.89208 1.20274 1.00180 0.93857 0.96503 1.21008 0.84656 0.82465 0.82190 1.90762 1.50025 1.34862 1.70071 1.45929 1.36452 1.17157 1.37047 1.20970 0.86555 1.00143 0.88471 0.92203 1.21778 0.99135 0.99832 0.94675 1.21340 0.90700 1.03678 0.97487 1.20675 0.90744 1.03398 0.91066 0.84916 1.23741 0.85924 0.82704 0.93202 1.68392 1.31762 1.23334 1.03312 1.23183 0.86373 0.91435 0.95693 1.23008 1.04351 1.05636 1.01298 1.17661 0.82554 0.83918 0.84905 1.90987 1.30640 1.46757 1.79198 1.44630 1.17432 1.39315 1.23872 1.21494 0.99250 0.98834 0.94805 1.21808 0.93765 1.02825 0.97324 1.41869 1.40930 1.10961 1.19424 0.76582 0.85459 1.21981 1.22481 0.83340 0.84185 0.83814 0.85331 0.74349 0.90007 0.88531 0.91006 0.89979 0.78525 0.82353 0.73087 0.92241 0.90670 0.89013 0.93493 0.74391 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.47 12.88 -148.98 -1.92 -4.39 16 2 C -0.06 -0.06 3.08 71.24 0.22 0.16 16 3 Si 0.80 -0.19 30.58 68.60 2.10 1.91 16 4 C -0.02 -0.06 6.50 41.08 0.27 0.21 16 5 C -0.20 -0.81 9.37 22.14 0.21 -0.60 16 6 C -0.20 -0.81 10.77 22.14 0.24 -0.57 16 7 C 0.04 0.04 5.66 41.08 0.23 0.27 16 8 C -0.07 0.47 6.24 29.10 0.18 0.66 16 9 C 0.51 -0.71 7.79 87.66 0.68 -0.03 16 10 O -0.58 -5.79 15.70 -3.04 -0.05 -5.84 16 11 N -0.71 5.89 5.08 -442.54 -2.25 3.64 16 12 C 0.14 -0.92 2.45 44.99 0.11 -0.81 16 13 H 0.06 0.05 7.58 -2.39 -0.02 0.03 16 14 C -0.12 1.36 5.39 30.59 0.16 1.53 16 15 C -0.09 0.86 4.68 30.60 0.14 1.00 16 16 C -0.04 0.37 2.48 -11.54 -0.03 0.34 16 17 H 0.13 -2.02 8.14 -2.39 -0.02 -2.04 16 18 C 0.41 -1.50 6.73 138.18 0.93 -0.57 16 19 N -0.54 0.54 9.12 -187.56 -1.71 -1.17 16 20 C 0.17 -0.20 11.20 83.96 0.94 0.74 16 21 C -0.32 -1.07 10.07 22.48 0.23 -0.84 16 22 C 0.51 3.80 7.75 84.89 0.66 4.46 16 23 O -0.59 -9.99 17.97 -5.23 -0.09 -10.08 16 24 N -0.61 0.73 5.25 -310.70 -1.63 -0.90 16 25 C -0.10 0.71 5.18 30.59 0.16 0.87 16 26 C -0.12 0.79 5.50 30.60 0.17 0.95 16 27 N -0.54 -0.69 6.07 -171.11 -1.04 -1.73 16 28 H 0.39 0.38 8.70 -74.05 -0.64 -0.26 16 29 H 0.13 -0.25 7.96 -2.39 -0.02 -0.27 16 30 H -0.29 -1.64 7.11 99.48 0.71 -0.93 16 31 H -0.30 -1.83 7.11 99.48 0.71 -1.12 16 32 H 0.15 0.15 6.22 -2.91 -0.02 0.13 16 33 H 0.14 0.28 8.06 -2.91 -0.02 0.26 16 34 H 0.14 -1.75 8.14 -2.39 -0.02 -1.77 16 35 H 0.13 -1.64 8.14 -2.38 -0.02 -1.66 16 36 H 0.42 -6.47 8.60 -92.71 -0.80 -7.27 16 37 H 0.08 -0.93 8.14 -2.39 -0.02 -0.95 16 38 H 0.10 -1.55 8.14 -2.39 -0.02 -1.57 16 39 H 0.07 -0.36 7.75 -2.39 -0.02 -0.38 16 40 H 0.08 -0.79 8.14 -2.38 -0.02 -0.81 16 41 H 0.20 -1.46 8.06 -2.91 -0.02 -1.48 16 42 H 0.16 0.34 8.06 -2.91 -0.02 0.31 16 43 H 0.43 -2.57 8.78 -92.71 -0.81 -3.38 16 44 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 45 H 0.07 -0.56 8.14 -2.39 -0.02 -0.58 16 46 H 0.09 -1.01 8.14 -2.39 -0.02 -1.03 16 47 H 0.05 -0.01 8.14 -2.39 -0.02 -0.03 16 48 H 0.42 -0.90 8.96 -92.71 -0.83 -1.73 16 Total: 0.00 -34.38 397.85 -3.10 -37.48 By element: Atomic # 1 Polarization: -24.67 SS G_CDS: -2.01 Total: -26.68 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: 5.50 Total: 7.77 kcal Atomic # 7 Polarization: 6.46 SS G_CDS: -6.63 Total: -0.16 kcal Atomic # 8 Polarization: -18.25 SS G_CDS: -2.06 Total: -20.31 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: 2.10 Total: 1.91 kcal Total: -34.38 -3.10 -37.48 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_14644196.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.790 kcal (2) G-P(sol) polarization free energy of solvation -34.380 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.590 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.102 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.482 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.692 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds