Wall clock time and date at job start Sat Mar 6 2021 19:58:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86293 * 109.47372 * 2 1 4 4 C 1.50705 * 109.47012 * 119.99973 * 2 1 3 5 5 C 1.38709 * 120.02687 * 75.02023 * 4 2 1 6 6 O 1.35895 * 120.05826 * 0.02562 * 5 4 2 7 7 C 1.42904 * 117.00129 * 179.97438 * 6 5 4 8 8 C 1.50704 * 109.47033 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00105 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99611 * 179.97438 * 8 7 6 11 11 C 1.46501 * 119.99563 * 179.97438 * 10 8 7 12 12 H 1.08992 * 109.47564 * 325.00131 * 11 10 8 13 13 C 1.52999 * 109.46813 * 85.00249 * 11 10 8 14 14 C 1.53006 * 109.47137 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.47036 * 300.00168 * 14 13 11 16 16 H 1.08999 * 109.47086 * 299.99188 * 15 14 13 17 17 C 1.50704 * 109.46716 * 180.02562 * 15 14 13 18 18 N 1.30636 * 119.24952 * 264.99308 * 17 15 14 19 19 C 1.33521 * 121.50698 * 179.97438 * 18 17 15 20 20 C 1.36207 * 119.90455 * 0.02562 * 19 18 17 21 21 C 1.41022 * 118.59629 * 359.97438 * 20 19 18 22 22 O 1.21980 * 120.71143 * 180.02562 * 21 20 19 23 23 N 1.34749 * 119.25643 * 84.72815 * 17 15 14 24 24 C 1.52999 * 109.47294 * 59.99929 * 15 14 13 25 25 C 1.52998 * 109.46787 * 299.99739 * 24 15 14 26 26 C 1.38759 * 119.88822 * 179.97438 * 5 4 2 27 27 C 1.38126 * 119.94094 * 0.02562 * 26 5 4 28 28 C 1.38290 * 120.05768 * 359.97408 * 27 26 5 29 29 C 1.38164 * 120.02624 * 254.99697 * 4 2 1 30 30 H 0.96698 * 114.00073 * 59.99699 * 1 2 3 31 31 H 1.08992 * 109.47026 * 239.99706 * 2 1 3 32 32 H 1.48504 * 110.00084 * 59.99642 * 3 2 1 33 33 H 1.48498 * 110.00336 * 181.32069 * 3 2 1 34 34 H 1.09001 * 109.47177 * 299.99686 * 7 6 5 35 35 H 1.09002 * 109.46778 * 59.99753 * 7 6 5 36 36 H 0.97003 * 120.00302 * 0.02562 * 10 8 7 37 37 H 1.09000 * 109.47160 * 299.99671 * 13 11 10 38 38 H 1.09007 * 109.47361 * 60.00001 * 13 11 10 39 39 H 1.08998 * 109.47279 * 180.02562 * 14 13 11 40 40 H 1.09002 * 109.46806 * 60.00413 * 14 13 11 41 41 H 1.07992 * 120.04965 * 180.02562 * 19 18 17 42 42 H 1.08007 * 120.70206 * 180.02562 * 20 19 18 43 43 H 0.97000 * 120.03720 * 359.97438 * 23 17 15 44 44 H 1.09000 * 109.47160 * 179.97438 * 24 15 14 45 45 H 1.09000 * 109.46854 * 60.00058 * 24 15 14 46 46 H 1.09000 * 109.47684 * 299.99811 * 25 24 15 47 47 H 1.09007 * 109.46760 * 179.97438 * 25 24 15 48 48 H 1.07998 * 120.02743 * 180.02562 * 26 5 4 49 49 H 1.08005 * 119.97091 * 180.02562 * 27 26 5 50 50 H 1.07995 * 119.94278 * 180.27458 * 28 27 26 51 51 H 1.07997 * 119.97398 * 0.02562 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.8700 -2.0941 1.3068 6 8 1.3576 -2.8108 0.2722 7 6 1.3263 -4.2318 0.4199 8 6 0.7292 -4.8524 -0.8169 9 8 0.3658 -4.1472 -1.7342 10 7 0.5991 -6.1910 -0.9034 11 6 0.0181 -6.7942 -2.1054 12 1 -0.7614 -6.1420 -2.4989 13 6 1.1095 -6.9791 -3.1616 14 6 0.5030 -7.6097 -4.4168 15 6 -0.1004 -8.9705 -4.0633 16 1 0.6794 -9.6225 -3.6698 17 6 -0.6972 -9.5918 -5.2998 18 7 -1.9713 -9.4344 -5.5419 19 6 -2.5467 -9.9646 -6.6238 20 6 -1.8007 -10.6890 -7.5036 21 6 -0.4253 -10.8590 -7.2424 22 8 0.2790 -11.4999 -8.0047 23 7 0.0964 -10.2925 -6.1334 24 6 -1.1918 -8.7856 -3.0071 25 6 -0.5852 -8.1551 -1.7520 26 6 2.3338 -2.7453 2.4409 27 6 2.8548 -2.0145 3.4909 28 6 2.9148 -0.6351 3.4124 29 6 2.4537 0.0159 2.2833 30 1 -0.3933 0.4417 -0.7650 31 1 1.7923 -0.5138 -0.8899 32 1 1.5615 2.4679 1.2085 33 1 3.5346 1.7702 -0.0322 34 1 2.3407 -4.6049 0.5605 35 1 0.7194 -4.4937 1.2867 36 1 0.8894 -6.7550 -0.1695 37 1 1.5396 -6.0097 -3.4132 38 1 1.8892 -7.6315 -2.7682 39 1 1.2806 -7.7418 -5.1691 40 1 -0.2768 -6.9576 -4.8104 41 1 -3.6020 -9.8194 -6.8011 42 1 -2.2528 -11.1233 -8.3831 43 1 1.0407 -10.3925 -5.9352 44 1 -1.6219 -9.7551 -2.7556 45 1 -1.9716 -8.1337 -3.4007 46 1 0.1946 -8.8071 -1.3583 47 1 -1.3629 -8.0230 -0.9996 48 1 2.2876 -3.8225 2.5025 49 1 3.2163 -2.5209 4.3738 50 1 3.3265 -0.0659 4.2326 51 1 2.5016 1.0932 2.2244 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_2989392.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:58:42 Heat of formation + Delta-G solvation = -68.295484 kcal Electronic energy + Delta-G solvation = -34772.013629 eV Core-core repulsion = 30024.663678 eV Total energy + Delta-G solvation = -4747.349951 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.88347 -41.66085 -40.94249 -39.66596 -38.62159 -38.18556 -37.35218 -35.91300 -35.18264 -32.96114 -32.66052 -32.08919 -31.40049 -30.57510 -28.96747 -26.58356 -25.88211 -25.34655 -23.98899 -23.76221 -22.76203 -22.45222 -21.63747 -21.03162 -19.77483 -19.37214 -19.13785 -18.41128 -18.25945 -17.81812 -17.45700 -17.40043 -17.07266 -16.94457 -16.79069 -16.13905 -15.81593 -15.70051 -15.59658 -15.48052 -15.35460 -15.14155 -14.92931 -14.72182 -14.46699 -14.17839 -14.06893 -13.97232 -13.76558 -13.62828 -13.55329 -13.35861 -12.96153 -12.71428 -12.69560 -12.54864 -12.39785 -12.20958 -12.07634 -11.86906 -11.83787 -11.71854 -11.53953 -11.22185 -11.13532 -10.88697 -10.24286 -10.12966 -10.02696 -9.58085 -9.24627 -4.91746 -0.48825 0.16557 0.36678 0.76965 1.36304 1.38794 1.45395 1.54686 1.68937 2.00462 2.46986 2.53423 2.61679 2.66219 3.21160 3.33942 3.44562 3.47221 3.52167 3.58566 3.69924 3.72328 3.78340 3.84730 3.89578 3.93443 3.94971 4.07033 4.07822 4.11956 4.21019 4.21356 4.23321 4.28553 4.37879 4.45169 4.49218 4.54427 4.59588 4.75102 4.79878 4.83193 4.88631 4.92256 4.95042 5.04468 5.16156 5.20513 5.28708 5.30233 5.40055 5.41597 5.43081 5.63033 6.18374 6.33374 6.67759 6.78154 6.81544 7.05256 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.061 4.061 3 Si 0.682 3.318 4 C -0.102 4.102 5 C 0.153 3.847 6 O -0.277 6.277 7 C 0.037 3.963 8 C 0.518 3.482 9 O -0.507 6.507 10 N -0.726 5.726 11 C 0.145 3.855 12 H 0.095 0.905 13 C -0.128 4.128 14 C -0.109 4.109 15 C -0.046 4.046 16 H 0.101 0.899 17 C 0.403 3.597 18 N -0.532 5.532 19 C 0.156 3.844 20 C -0.293 4.293 21 C 0.520 3.480 22 O -0.537 6.537 23 N -0.627 5.627 24 C -0.096 4.096 25 C -0.128 4.128 26 C -0.211 4.211 27 C -0.072 4.072 28 C -0.151 4.151 29 C -0.084 4.084 30 H 0.380 0.620 31 H 0.074 0.926 32 H -0.250 1.250 33 H -0.255 1.255 34 H 0.093 0.907 35 H 0.094 0.906 36 H 0.402 0.598 37 H 0.077 0.923 38 H 0.069 0.931 39 H 0.071 0.929 40 H 0.081 0.919 41 H 0.171 0.829 42 H 0.157 0.843 43 H 0.417 0.583 44 H 0.076 0.924 45 H 0.090 0.910 46 H 0.071 0.929 47 H 0.079 0.921 48 H 0.132 0.868 49 H 0.131 0.869 50 H 0.129 0.871 51 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.693 -0.691 4.844 4.942 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.172 4.172 3 Si 0.584 3.416 4 C -0.103 4.103 5 C 0.107 3.893 6 O -0.189 6.189 7 C -0.042 4.042 8 C 0.302 3.698 9 O -0.380 6.380 10 N -0.379 5.379 11 C 0.041 3.959 12 H 0.113 0.887 13 C -0.166 4.166 14 C -0.148 4.148 15 C -0.067 4.067 16 H 0.119 0.881 17 C 0.138 3.862 18 N -0.256 5.256 19 C 0.018 3.982 20 C -0.317 4.317 21 C 0.318 3.682 22 O -0.415 6.415 23 N -0.266 5.266 24 C -0.134 4.134 25 C -0.166 4.166 26 C -0.229 4.229 27 C -0.090 4.090 28 C -0.169 4.169 29 C -0.102 4.102 30 H 0.227 0.773 31 H 0.092 0.908 32 H -0.175 1.175 33 H -0.180 1.180 34 H 0.111 0.889 35 H 0.112 0.888 36 H 0.236 0.764 37 H 0.096 0.904 38 H 0.088 0.912 39 H 0.090 0.910 40 H 0.099 0.901 41 H 0.188 0.812 42 H 0.175 0.825 43 H 0.256 0.744 44 H 0.095 0.905 45 H 0.109 0.891 46 H 0.090 0.910 47 H 0.097 0.903 48 H 0.150 0.850 49 H 0.149 0.851 50 H 0.147 0.853 51 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 0.579 0.170 4.777 4.815 hybrid contribution 1.136 -1.674 0.224 2.035 sum 1.715 -1.504 5.001 5.497 Atomic orbital electron populations 1.86498 1.17040 1.81921 1.49259 1.24508 0.85968 1.09595 0.97131 0.95221 0.80846 0.78501 0.87072 1.18685 1.04539 0.90389 0.96692 1.18738 0.93038 0.90673 0.86839 1.86210 1.77472 1.16819 1.38362 1.22496 1.02476 0.81421 0.97762 1.19993 0.79118 0.82511 0.88165 1.90788 1.47045 1.61036 1.39147 1.45883 1.65113 1.06195 1.20754 1.21070 0.95733 0.94576 0.84500 0.88675 1.21915 0.98126 1.01976 0.94608 1.21565 1.00974 0.94037 0.98208 1.20558 0.98842 0.97469 0.89790 0.88094 1.23189 0.87255 0.85353 0.90445 1.68292 1.07636 1.27021 1.22635 1.22765 1.00816 0.87702 0.86911 1.22982 0.93210 1.09613 1.05917 1.17359 0.90031 0.80383 0.80420 1.91030 1.62786 1.41374 1.46284 1.44769 1.14726 1.44580 1.22482 1.21367 0.96874 1.02671 0.92502 1.21859 1.01091 0.95034 0.98610 1.21289 1.06379 1.00464 0.94807 1.21018 0.96348 0.93909 0.97762 1.21039 1.02777 0.94729 0.98345 1.20885 0.97331 0.99259 0.92676 0.77273 0.90784 1.17543 1.17957 0.88920 0.88811 0.76404 0.90449 0.91198 0.91013 0.90062 0.81210 0.82503 0.74388 0.90518 0.89133 0.91017 0.90261 0.85049 0.85145 0.85267 0.85468 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.58 12.86 -35.23 -0.45 -2.03 16 2 C -0.06 -0.15 2.37 36.01 0.09 -0.06 16 3 Si 0.68 0.16 30.20 -169.99 -5.13 -4.97 16 4 C -0.10 -0.38 5.30 -104.47 -0.55 -0.93 16 5 C 0.15 0.47 6.66 -39.21 -0.26 0.21 16 6 O -0.28 -0.91 9.00 -39.32 -0.35 -1.27 16 7 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 8 C 0.52 0.19 7.87 -10.99 -0.09 0.10 16 9 O -0.51 -2.60 16.16 -14.35 -0.23 -2.83 16 10 N -0.73 2.37 5.08 -53.81 -0.27 2.10 16 11 C 0.15 -0.44 2.46 -67.93 -0.17 -0.61 16 12 H 0.10 -0.06 7.58 -51.93 -0.39 -0.45 16 13 C -0.13 0.42 5.49 -26.73 -0.15 0.27 16 14 C -0.11 0.40 5.19 -26.73 -0.14 0.26 16 15 C -0.05 0.20 2.48 -91.77 -0.23 -0.03 16 16 H 0.10 -0.63 8.14 -51.93 -0.42 -1.05 16 17 C 0.40 -0.71 6.73 -155.57 -1.05 -1.76 16 18 N -0.53 0.27 9.12 -10.63 -0.10 0.17 16 19 C 0.16 -0.10 11.20 -17.55 -0.20 -0.30 16 20 C -0.29 -0.30 10.07 -39.26 -0.40 -0.70 16 21 C 0.52 1.52 7.75 -15.10 -0.12 1.40 16 22 O -0.54 -3.84 17.97 4.94 0.09 -3.75 16 23 N -0.63 0.51 5.25 -12.27 -0.06 0.44 16 24 C -0.10 0.40 4.67 -26.73 -0.12 0.27 16 25 C -0.13 0.64 5.39 -26.73 -0.14 0.50 16 26 C -0.21 -0.13 9.04 -39.43 -0.36 -0.49 16 27 C -0.07 -0.02 10.04 -39.60 -0.40 -0.42 16 28 C -0.15 -0.19 10.04 -39.56 -0.40 -0.59 16 29 C -0.08 -0.24 8.66 -39.61 -0.34 -0.58 16 30 H 0.38 -0.73 8.74 45.56 0.40 -0.33 16 31 H 0.07 0.17 7.83 -51.93 -0.41 -0.24 16 32 H -0.25 -0.64 6.75 56.52 0.38 -0.26 16 33 H -0.25 -0.64 7.11 56.52 0.40 -0.23 16 34 H 0.09 -0.35 7.66 -51.93 -0.40 -0.74 16 35 H 0.09 -0.30 7.66 -51.93 -0.40 -0.70 16 36 H 0.40 -2.55 8.60 -40.82 -0.35 -2.90 16 37 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 38 H 0.07 -0.31 8.14 -51.92 -0.42 -0.74 16 39 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 40 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 41 H 0.17 -0.57 8.06 -52.49 -0.42 -0.99 16 42 H 0.16 0.02 8.06 -52.48 -0.42 -0.40 16 43 H 0.42 -1.26 8.78 -40.82 -0.36 -1.62 16 44 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 45 H 0.09 -0.25 7.76 -51.93 -0.40 -0.65 16 46 H 0.07 -0.44 8.14 -51.93 -0.42 -0.87 16 47 H 0.08 -0.38 8.14 -51.92 -0.42 -0.80 16 48 H 0.13 -0.32 6.30 -52.49 -0.33 -0.65 16 49 H 0.13 -0.29 8.06 -52.48 -0.42 -0.71 16 50 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 51 H 0.13 0.28 4.90 -52.49 -0.26 0.02 16 LS Contribution 419.29 15.07 6.32 6.32 Total: 0.00 -14.30 419.29 -12.22 -26.52 By element: Atomic # 1 Polarization: -10.19 SS G_CDS: -7.19 Total: -17.38 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -4.83 Total: -3.31 kcal Atomic # 7 Polarization: 3.14 SS G_CDS: -0.43 Total: 2.71 kcal Atomic # 8 Polarization: -8.93 SS G_CDS: -0.95 Total: -9.88 kcal Atomic # 14 Polarization: 0.16 SS G_CDS: -5.13 Total: -4.97 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -14.30 -12.22 -26.52 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_2989392.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.776 kcal (2) G-P(sol) polarization free energy of solvation -14.304 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.080 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.215 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.520 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.295 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds