Wall clock time and date at job start Sat Mar 6 2021 19:58:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86293 * 109.47372 * 2 1 4 4 C 1.50705 * 109.47012 * 119.99973 * 2 1 3 5 5 C 1.38709 * 120.02687 * 75.02023 * 4 2 1 6 6 O 1.35895 * 120.05826 * 0.02562 * 5 4 2 7 7 C 1.42904 * 117.00129 * 179.97438 * 6 5 4 8 8 C 1.50704 * 109.47033 * 179.97438 * 7 6 5 9 9 O 1.21278 * 120.00105 * 359.97438 * 8 7 6 10 10 N 1.34774 * 119.99611 * 179.97438 * 8 7 6 11 11 C 1.46501 * 119.99563 * 179.97438 * 10 8 7 12 12 H 1.08992 * 109.47564 * 325.00131 * 11 10 8 13 13 C 1.52999 * 109.46813 * 85.00249 * 11 10 8 14 14 C 1.53006 * 109.47137 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.47036 * 300.00168 * 14 13 11 16 16 H 1.08999 * 109.47086 * 299.99188 * 15 14 13 17 17 C 1.50704 * 109.46716 * 180.02562 * 15 14 13 18 18 N 1.30636 * 119.24952 * 264.99308 * 17 15 14 19 19 C 1.33521 * 121.50698 * 179.97438 * 18 17 15 20 20 C 1.36207 * 119.90455 * 0.02562 * 19 18 17 21 21 C 1.41022 * 118.59629 * 359.97438 * 20 19 18 22 22 O 1.21980 * 120.71143 * 180.02562 * 21 20 19 23 23 N 1.34749 * 119.25643 * 84.72815 * 17 15 14 24 24 C 1.52999 * 109.47294 * 59.99929 * 15 14 13 25 25 C 1.52998 * 109.46787 * 299.99739 * 24 15 14 26 26 C 1.38759 * 119.88822 * 179.97438 * 5 4 2 27 27 C 1.38126 * 119.94094 * 0.02562 * 26 5 4 28 28 C 1.38290 * 120.05768 * 359.97408 * 27 26 5 29 29 C 1.38164 * 120.02624 * 254.99697 * 4 2 1 30 30 H 0.96698 * 114.00073 * 59.99699 * 1 2 3 31 31 H 1.08992 * 109.47026 * 239.99706 * 2 1 3 32 32 H 1.48504 * 110.00084 * 59.99642 * 3 2 1 33 33 H 1.48498 * 110.00336 * 181.32069 * 3 2 1 34 34 H 1.09001 * 109.47177 * 299.99686 * 7 6 5 35 35 H 1.09002 * 109.46778 * 59.99753 * 7 6 5 36 36 H 0.97003 * 120.00302 * 0.02562 * 10 8 7 37 37 H 1.09000 * 109.47160 * 299.99671 * 13 11 10 38 38 H 1.09007 * 109.47361 * 60.00001 * 13 11 10 39 39 H 1.08998 * 109.47279 * 180.02562 * 14 13 11 40 40 H 1.09002 * 109.46806 * 60.00413 * 14 13 11 41 41 H 1.07992 * 120.04965 * 180.02562 * 19 18 17 42 42 H 1.08007 * 120.70206 * 180.02562 * 20 19 18 43 43 H 0.97000 * 120.03720 * 359.97438 * 23 17 15 44 44 H 1.09000 * 109.47160 * 179.97438 * 24 15 14 45 45 H 1.09000 * 109.46854 * 60.00058 * 24 15 14 46 46 H 1.09000 * 109.47684 * 299.99811 * 25 24 15 47 47 H 1.09007 * 109.46760 * 179.97438 * 25 24 15 48 48 H 1.07998 * 120.02743 * 180.02562 * 26 5 4 49 49 H 1.08005 * 119.97091 * 180.02562 * 27 26 5 50 50 H 1.07995 * 119.94278 * 180.27458 * 28 27 26 51 51 H 1.07997 * 119.97398 * 0.02562 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.8700 -2.0941 1.3068 6 8 1.3576 -2.8108 0.2722 7 6 1.3263 -4.2318 0.4199 8 6 0.7292 -4.8524 -0.8169 9 8 0.3658 -4.1472 -1.7342 10 7 0.5991 -6.1910 -0.9034 11 6 0.0181 -6.7942 -2.1054 12 1 -0.7614 -6.1420 -2.4989 13 6 1.1095 -6.9791 -3.1616 14 6 0.5030 -7.6097 -4.4168 15 6 -0.1004 -8.9705 -4.0633 16 1 0.6794 -9.6225 -3.6698 17 6 -0.6972 -9.5918 -5.2998 18 7 -1.9713 -9.4344 -5.5419 19 6 -2.5467 -9.9646 -6.6238 20 6 -1.8007 -10.6890 -7.5036 21 6 -0.4253 -10.8590 -7.2424 22 8 0.2790 -11.4999 -8.0047 23 7 0.0964 -10.2925 -6.1334 24 6 -1.1918 -8.7856 -3.0071 25 6 -0.5852 -8.1551 -1.7520 26 6 2.3338 -2.7453 2.4409 27 6 2.8548 -2.0145 3.4909 28 6 2.9148 -0.6351 3.4124 29 6 2.4537 0.0159 2.2833 30 1 -0.3933 0.4417 -0.7650 31 1 1.7923 -0.5138 -0.8899 32 1 1.5615 2.4679 1.2085 33 1 3.5346 1.7702 -0.0322 34 1 2.3407 -4.6049 0.5605 35 1 0.7194 -4.4937 1.2867 36 1 0.8894 -6.7550 -0.1695 37 1 1.5396 -6.0097 -3.4132 38 1 1.8892 -7.6315 -2.7682 39 1 1.2806 -7.7418 -5.1691 40 1 -0.2768 -6.9576 -4.8104 41 1 -3.6020 -9.8194 -6.8011 42 1 -2.2528 -11.1233 -8.3831 43 1 1.0407 -10.3925 -5.9352 44 1 -1.6219 -9.7551 -2.7556 45 1 -1.9716 -8.1337 -3.4007 46 1 0.1946 -8.8071 -1.3583 47 1 -1.3629 -8.0230 -0.9996 48 1 2.2876 -3.8225 2.5025 49 1 3.2163 -2.5209 4.3738 50 1 3.3265 -0.0659 4.2326 51 1 2.5016 1.0932 2.2244 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_2989392.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:58:40 Heat of formation + Delta-G solvation = -73.489097 kcal Electronic energy + Delta-G solvation = -34772.238841 eV Core-core repulsion = 30024.663678 eV Total energy + Delta-G solvation = -4747.575163 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -42.90029 -41.67799 -40.89921 -39.64945 -38.71163 -38.24274 -37.48911 -35.87139 -35.17389 -33.00493 -32.65172 -31.81032 -31.41746 -30.53259 -28.86762 -26.68336 -25.83052 -25.33732 -23.80607 -23.71010 -22.68049 -22.49517 -21.55052 -20.82937 -19.77399 -19.39080 -19.17162 -18.42946 -18.32225 -17.79855 -17.43174 -17.37398 -17.09040 -16.98623 -16.80022 -16.07382 -15.76739 -15.72730 -15.62065 -15.46636 -15.19889 -15.11889 -14.97048 -14.75479 -14.44321 -14.09624 -14.06339 -14.01195 -13.78294 -13.61686 -13.41321 -13.16337 -13.03760 -12.73635 -12.51219 -12.35699 -12.18733 -12.11227 -12.03576 -12.02239 -11.80792 -11.60115 -11.39061 -11.32017 -11.09275 -10.91978 -10.26363 -10.11855 -10.10016 -9.67152 -9.31878 -4.97430 -0.45790 0.09370 0.29180 0.67655 1.27543 1.47370 1.47690 1.56604 1.60476 1.89678 2.49767 2.54339 2.57966 2.78848 3.39970 3.45021 3.53208 3.62070 3.65502 3.69255 3.71416 3.87084 3.97155 3.97965 4.05778 4.07315 4.16386 4.16843 4.18371 4.24014 4.29325 4.36065 4.40247 4.41196 4.49849 4.52438 4.54816 4.66143 4.83550 4.85873 4.88401 5.01566 5.07722 5.16547 5.16898 5.22844 5.24119 5.31529 5.35011 5.38046 5.40389 5.47272 5.55484 5.62794 6.22022 6.50175 6.66481 6.70786 6.86799 7.17477 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.077 4.077 3 Si 0.778 3.222 4 C -0.137 4.137 5 C 0.134 3.866 6 O -0.307 6.307 7 C 0.032 3.968 8 C 0.514 3.486 9 O -0.567 6.567 10 N -0.705 5.705 11 C 0.144 3.856 12 H 0.063 0.937 13 C -0.121 4.121 14 C -0.104 4.104 15 C -0.039 4.039 16 H 0.134 0.866 17 C 0.409 3.591 18 N -0.545 5.545 19 C 0.173 3.827 20 C -0.319 4.319 21 C 0.509 3.491 22 O -0.593 6.593 23 N -0.615 5.615 24 C -0.093 4.093 25 C -0.116 4.116 26 C -0.207 4.207 27 C -0.073 4.073 28 C -0.159 4.159 29 C -0.105 4.105 30 H 0.397 0.603 31 H 0.065 0.935 32 H -0.282 1.282 33 H -0.286 1.286 34 H 0.124 0.876 35 H 0.120 0.880 36 H 0.421 0.579 37 H 0.049 0.951 38 H 0.094 0.906 39 H 0.077 0.923 40 H 0.061 0.939 41 H 0.198 0.802 42 H 0.158 0.842 43 H 0.429 0.571 44 H 0.082 0.918 45 H 0.072 0.928 46 H 0.098 0.902 47 H 0.081 0.919 48 H 0.165 0.835 49 H 0.162 0.838 50 H 0.147 0.853 51 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.224 -2.145 7.289 7.696 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.186 4.186 3 Si 0.683 3.317 4 C -0.138 4.138 5 C 0.088 3.912 6 O -0.220 6.220 7 C -0.046 4.046 8 C 0.300 3.700 9 O -0.444 6.444 10 N -0.359 5.359 11 C 0.039 3.961 12 H 0.082 0.918 13 C -0.159 4.159 14 C -0.144 4.144 15 C -0.059 4.059 16 H 0.151 0.849 17 C 0.145 3.855 18 N -0.268 5.268 19 C 0.033 3.967 20 C -0.343 4.343 21 C 0.310 3.690 22 O -0.476 6.476 23 N -0.252 5.252 24 C -0.132 4.132 25 C -0.154 4.154 26 C -0.225 4.225 27 C -0.090 4.090 28 C -0.177 4.177 29 C -0.123 4.123 30 H 0.247 0.753 31 H 0.084 0.916 32 H -0.210 1.210 33 H -0.213 1.213 34 H 0.142 0.858 35 H 0.137 0.863 36 H 0.259 0.741 37 H 0.068 0.932 38 H 0.112 0.888 39 H 0.096 0.904 40 H 0.080 0.920 41 H 0.214 0.786 42 H 0.176 0.824 43 H 0.269 0.731 44 H 0.101 0.899 45 H 0.091 0.909 46 H 0.117 0.883 47 H 0.100 0.900 48 H 0.183 0.817 49 H 0.179 0.821 50 H 0.165 0.835 51 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 1.109 -1.323 7.268 7.471 hybrid contribution 0.928 -1.223 -0.431 1.595 sum 2.037 -2.546 6.837 7.575 Atomic orbital electron populations 1.86442 1.17629 1.82539 1.50575 1.24816 0.85696 1.11362 0.96689 0.94188 0.77471 0.75301 0.84790 1.19044 1.05722 0.91543 0.97495 1.18971 0.93762 0.90714 0.87703 1.86165 1.77781 1.18969 1.39057 1.22794 1.04614 0.79562 0.97633 1.20396 0.78388 0.83260 0.87968 1.90766 1.49859 1.62553 1.41260 1.45736 1.63688 1.05269 1.21205 1.21067 0.95184 0.95138 0.84667 0.91831 1.21833 0.98436 1.01037 0.94610 1.21497 1.00562 0.94044 0.98263 1.20682 0.99510 0.97232 0.88510 0.84851 1.23737 0.86976 0.84252 0.90578 1.68389 1.08358 1.27248 1.22807 1.23176 1.01870 0.85763 0.85856 1.23007 0.92774 1.11468 1.07060 1.17656 0.90563 0.80100 0.80713 1.90989 1.64025 1.44222 1.48359 1.44627 1.15491 1.43610 1.21507 1.21332 0.96490 1.02602 0.92768 1.21789 1.01746 0.93745 0.98143 1.21687 1.04954 1.02194 0.93687 1.21427 0.95436 0.93548 0.98625 1.21367 1.02383 0.95734 0.98212 1.21009 0.98485 0.99278 0.93528 0.75341 0.91648 1.20970 1.21302 0.85811 0.86279 0.74089 0.93204 0.88796 0.90443 0.92045 0.78557 0.82384 0.73068 0.89909 0.90914 0.88317 0.90002 0.81723 0.82090 0.83517 0.85908 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -4.45 12.86 -148.98 -1.92 -6.36 16 2 C -0.08 -0.53 2.37 71.24 0.17 -0.36 16 3 Si 0.78 1.55 30.20 68.60 2.07 3.62 16 4 C -0.14 -1.24 5.30 -19.77 -0.10 -1.35 16 5 C 0.13 0.89 6.66 22.51 0.15 1.04 16 6 O -0.31 -2.31 9.00 -73.34 -0.66 -2.97 16 7 C 0.03 -0.10 5.22 71.24 0.37 0.28 16 8 C 0.51 0.54 7.87 87.66 0.69 1.23 16 9 O -0.57 -7.13 16.16 16.01 0.26 -6.87 16 10 N -0.71 5.34 5.08 -442.54 -2.25 3.09 16 11 C 0.14 -0.93 2.46 44.99 0.11 -0.82 16 12 H 0.06 0.03 7.58 -2.39 -0.02 0.01 16 13 C -0.12 0.85 5.49 30.60 0.17 1.02 16 14 C -0.10 0.79 5.19 30.60 0.16 0.94 16 15 C -0.04 0.40 2.48 -11.54 -0.03 0.37 16 16 H 0.13 -2.12 8.14 -2.39 -0.02 -2.14 16 17 C 0.41 -1.71 6.73 138.18 0.93 -0.78 16 18 N -0.54 0.77 9.12 -187.55 -1.71 -0.94 16 19 C 0.17 -0.26 11.20 83.96 0.94 0.68 16 20 C -0.32 -0.96 10.07 22.48 0.23 -0.74 16 21 C 0.51 3.62 7.75 84.89 0.66 4.28 16 22 O -0.59 -9.80 17.97 -5.25 -0.09 -9.90 16 23 N -0.61 1.01 5.25 -310.69 -1.63 -0.62 16 24 C -0.09 0.90 4.67 30.59 0.14 1.05 16 25 C -0.12 1.41 5.39 30.59 0.16 1.57 16 26 C -0.21 0.04 9.04 22.37 0.20 0.24 16 27 C -0.07 0.07 10.04 22.26 0.22 0.29 16 28 C -0.16 -0.37 10.04 22.28 0.22 -0.15 16 29 C -0.11 -0.73 8.66 22.25 0.19 -0.54 16 30 H 0.40 -0.79 8.74 -74.06 -0.65 -1.43 16 31 H 0.07 0.48 7.83 -2.39 -0.02 0.47 16 32 H -0.28 -1.96 6.75 99.48 0.67 -1.29 16 33 H -0.29 -1.93 7.11 99.48 0.71 -1.23 16 34 H 0.12 -1.21 7.66 -2.39 -0.02 -1.22 16 35 H 0.12 -1.01 7.66 -2.39 -0.02 -1.03 16 36 H 0.42 -6.49 8.60 -92.71 -0.80 -7.29 16 37 H 0.05 -0.03 8.14 -2.39 -0.02 -0.05 16 38 H 0.09 -1.09 8.14 -2.38 -0.02 -1.11 16 39 H 0.08 -0.65 8.14 -2.39 -0.02 -0.66 16 40 H 0.06 -0.19 8.14 -2.39 -0.02 -0.21 16 41 H 0.20 -1.51 8.06 -2.91 -0.02 -1.54 16 42 H 0.16 0.30 8.06 -2.91 -0.02 0.27 16 43 H 0.43 -2.77 8.78 -92.71 -0.81 -3.58 16 44 H 0.08 -0.83 8.14 -2.39 -0.02 -0.85 16 45 H 0.07 -0.40 7.76 -2.39 -0.02 -0.42 16 46 H 0.10 -1.64 8.14 -2.39 -0.02 -1.66 16 47 H 0.08 -0.95 8.14 -2.38 -0.02 -0.97 16 48 H 0.17 -1.33 6.30 -2.91 -0.02 -1.35 16 49 H 0.16 -1.21 8.06 -2.91 -0.02 -1.23 16 50 H 0.15 -0.32 8.06 -2.91 -0.02 -0.35 16 51 H 0.12 0.78 4.90 -2.91 -0.01 0.77 16 Total: 0.00 -39.21 419.29 -1.59 -40.80 By element: Atomic # 1 Polarization: -26.85 SS G_CDS: -1.25 Total: -28.10 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: 5.59 Total: 8.25 kcal Atomic # 7 Polarization: 7.12 SS G_CDS: -5.59 Total: 1.53 kcal Atomic # 8 Polarization: -23.69 SS G_CDS: -2.41 Total: -26.10 kcal Atomic # 14 Polarization: 1.55 SS G_CDS: 2.07 Total: 3.62 kcal Total: -39.21 -1.59 -40.80 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_2989392.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.687 kcal (2) G-P(sol) polarization free energy of solvation -39.209 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.896 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.593 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.802 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.489 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds