Wall clock time and date at job start Sat Mar 6 2021 19:59:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86304 * 109.47349 * 2 1 4 4 C 1.50703 * 109.47055 * 240.00160 * 2 1 3 5 5 C 1.38271 * 119.94343 * 119.72621 * 4 2 1 6 6 C 1.38145 * 120.04946 * 179.72605 * 5 4 2 7 7 C 1.38729 * 119.95020 * 0.57219 * 6 5 4 8 8 O 1.35899 * 120.05796 * 179.68323 * 7 6 5 9 9 C 1.42894 * 116.99856 * 0.02562 * 8 7 6 10 10 F 1.39894 * 109.47278 * 300.00121 * 9 8 7 11 11 F 1.39906 * 109.47215 * 60.00562 * 9 8 7 12 12 C 1.50701 * 109.47212 * 179.97438 * 9 8 7 13 13 O 1.21284 * 119.99367 * 0.02562 * 12 9 8 14 14 N 1.34777 * 120.00513 * 180.02562 * 12 9 8 15 15 C 1.46493 * 120.00066 * 180.02562 * 14 12 9 16 16 H 1.08999 * 109.47378 * 34.99860 * 15 14 12 17 17 C 1.53000 * 109.46918 * 155.00152 * 15 14 12 18 18 C 1.53000 * 109.47058 * 179.97438 * 17 15 14 19 19 C 1.53009 * 109.47027 * 299.99626 * 18 17 15 20 20 H 1.08999 * 109.47128 * 300.00149 * 19 18 17 21 21 C 1.50697 * 109.47173 * 180.02562 * 19 18 17 22 22 N 1.30635 * 119.25380 * 335.00240 * 21 19 18 23 23 C 1.33530 * 121.50490 * 179.97438 * 22 21 19 24 24 C 1.36195 * 119.91049 * 359.97438 * 23 22 21 25 25 C 1.41029 * 118.59060 * 0.02562 * 24 23 22 26 26 O 1.21979 * 120.70280 * 179.97438 * 25 24 23 27 27 N 1.34744 * 119.25143 * 154.73073 * 21 19 18 28 28 C 1.53000 * 109.46896 * 60.00275 * 19 18 17 29 29 C 1.53000 * 109.47058 * 299.99706 * 28 19 18 30 30 C 1.38729 * 119.88345 * 359.70221 * 7 6 5 31 31 C 1.38150 * 119.95038 * 0.02562 * 30 7 6 32 32 H 0.96708 * 114.00101 * 59.99198 * 1 2 3 33 33 H 1.09002 * 109.46984 * 120.00249 * 2 1 3 34 34 H 1.48497 * 110.00028 * 298.68295 * 3 2 1 35 35 H 1.48501 * 109.99652 * 59.99990 * 3 2 1 36 36 H 1.07998 * 119.96980 * 359.97438 * 5 4 2 37 37 H 1.08009 * 120.02002 * 180.25264 * 6 5 4 38 38 H 0.97004 * 119.99326 * 359.97438 * 14 12 9 39 39 H 1.09002 * 109.47105 * 299.99541 * 17 15 14 40 40 H 1.08999 * 109.47335 * 59.99681 * 17 15 14 41 41 H 1.08999 * 109.47288 * 59.99677 * 18 17 15 42 42 H 1.08998 * 109.47602 * 179.97438 * 18 17 15 43 43 H 1.08001 * 120.04193 * 180.02562 * 23 22 21 44 44 H 1.07992 * 120.70621 * 180.02562 * 24 23 22 45 45 H 0.96993 * 120.04610 * 0.02562 * 27 21 19 46 46 H 1.08999 * 109.47335 * 60.00001 * 28 19 18 47 47 H 1.09002 * 109.47105 * 180.02562 * 28 19 18 48 48 H 1.08999 * 109.47288 * 300.00323 * 29 28 19 49 49 H 1.08998 * 109.47602 * 180.02562 * 29 28 19 50 50 H 1.08010 * 120.02909 * 179.97438 * 30 7 6 51 51 H 1.07997 * 119.97457 * 180.02562 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7215 -0.0356 -2.1428 6 6 3.1878 -0.6863 -3.2686 7 6 2.8530 -2.0143 -3.4896 8 8 3.3052 -2.6546 -4.5997 9 6 4.1218 -1.8995 -5.4968 10 9 3.4014 -0.7961 -5.9666 11 9 5.2668 -1.4574 -4.8253 12 6 4.5264 -2.7681 -6.6599 13 8 4.1518 -3.9203 -6.7153 14 7 5.3044 -2.2646 -7.6386 15 6 5.6972 -3.1089 -8.7695 16 1 4.8827 -3.7908 -9.0140 17 6 6.0054 -2.2272 -9.9812 18 6 6.4163 -3.1089 -11.1622 19 6 7.6618 -3.9149 -10.7879 20 1 8.4760 -3.2327 -10.5432 21 6 8.0669 -4.7829 -11.9513 22 7 7.1650 -5.1385 -12.8269 23 6 7.4743 -5.9060 -13.8749 24 6 8.7553 -6.3350 -14.0479 25 6 9.7291 -5.9512 -13.1027 26 8 10.8878 -6.3139 -13.2199 27 7 9.3522 -5.1701 -12.0678 28 6 7.3536 -4.7966 -9.5761 29 6 6.9428 -3.9149 -8.3952 30 6 2.0553 -2.6874 -2.5757 31 6 1.5961 -2.0340 -1.4484 32 1 -0.3934 0.4418 -0.7650 33 1 1.7923 -0.5139 0.8900 34 1 1.5879 2.4586 -1.2242 35 1 1.5615 2.4678 1.2085 36 1 2.9775 0.9997 -1.9729 37 1 3.8084 -0.1599 -3.9788 38 1 5.6037 -1.3430 -7.5943 39 1 5.1182 -1.6527 -10.2477 40 1 6.8199 -1.5454 -9.7367 41 1 5.6021 -3.7911 -11.4069 42 1 6.6354 -2.4809 -12.0257 43 1 6.7098 -6.1856 -14.5847 44 1 9.0198 -6.9558 -14.8910 45 1 10.0053 -4.8908 -11.4073 46 1 6.5394 -5.4788 -9.8208 47 1 8.2410 -5.3704 -9.3092 48 1 7.7569 -3.2327 -8.1505 49 1 6.7236 -4.5429 -7.5317 50 1 1.7928 -3.7212 -2.7456 51 1 0.9754 -2.5577 -0.7365 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_4549640.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:59:27 Heat of formation + Delta-G solvation = -167.249027 kcal Electronic energy + Delta-G solvation = -40241.396508 eV Core-core repulsion = 34550.847658 eV Total energy + Delta-G solvation = -5690.548850 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.153 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -50.86179 -48.83084 -42.89017 -41.50878 -41.24255 -39.77138 -39.27106 -38.52376 -37.37071 -36.04518 -35.29631 -32.73958 -32.42377 -32.01816 -31.82594 -30.56553 -28.70354 -26.42299 -25.77448 -25.34134 -24.44387 -23.77092 -23.07795 -22.57670 -22.05594 -21.12870 -20.50888 -19.83588 -19.69884 -19.65300 -19.11184 -18.60193 -17.81880 -17.72266 -17.44022 -17.08923 -16.98636 -16.70792 -16.41541 -16.24888 -15.96121 -15.84199 -15.76931 -15.61819 -15.41020 -15.36005 -15.27755 -15.14842 -15.07701 -15.04061 -14.45898 -14.40023 -14.38080 -14.20959 -14.07680 -14.05944 -13.53275 -13.49189 -13.18544 -13.02418 -12.60635 -12.40883 -12.39664 -12.25360 -12.13220 -12.03809 -11.76095 -11.64420 -11.54198 -11.40708 -11.28572 -11.08283 -10.64738 -10.42871 -10.17696 -9.66094 -9.58497 -4.92596 -0.44419 0.02483 0.16473 0.50366 0.68018 0.68904 1.30335 1.57148 1.59644 1.70304 1.96033 2.03484 2.46183 2.51073 2.74070 2.85474 3.25713 3.39595 3.42684 3.55132 3.58219 3.61647 3.65640 3.69121 3.72824 3.92349 4.10089 4.11526 4.14851 4.21462 4.27606 4.31867 4.38023 4.41157 4.50244 4.50600 4.56306 4.59572 4.80764 4.83707 4.88086 4.91398 4.92576 5.05186 5.06698 5.08759 5.17323 5.22289 5.30451 5.34934 5.36048 5.39360 5.47879 5.52891 5.83761 5.91503 6.48070 6.52405 6.67799 6.71651 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.078 4.078 3 Si 0.762 3.238 4 C -0.139 4.139 5 C -0.077 4.077 6 C -0.192 4.192 7 C 0.087 3.913 8 O -0.306 6.306 9 C 0.432 3.568 10 F -0.172 7.172 11 F -0.169 7.169 12 C 0.517 3.483 13 O -0.508 6.508 14 N -0.680 5.680 15 C 0.140 3.860 16 H 0.081 0.919 17 C -0.119 4.119 18 C -0.092 4.092 19 C -0.041 4.041 20 H 0.134 0.866 21 C 0.409 3.591 22 N -0.544 5.544 23 C 0.173 3.827 24 C -0.319 4.319 25 C 0.509 3.491 26 O -0.593 6.593 27 N -0.615 5.615 28 C -0.104 4.104 29 C -0.125 4.125 30 C -0.137 4.137 31 C -0.058 4.058 32 H 0.386 0.614 33 H 0.130 0.870 34 H -0.281 1.281 35 H -0.302 1.302 36 H 0.154 0.846 37 H 0.143 0.857 38 H 0.424 0.576 39 H 0.085 0.915 40 H 0.100 0.900 41 H 0.077 0.923 42 H 0.084 0.916 43 H 0.197 0.803 44 H 0.157 0.843 45 H 0.429 0.571 46 H 0.066 0.934 47 H 0.080 0.920 48 H 0.096 0.904 49 H 0.057 0.943 50 H 0.144 0.856 51 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.754 6.589 0.044 6.632 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.187 4.187 3 Si 0.667 3.333 4 C -0.140 4.140 5 C -0.095 4.095 6 C -0.211 4.211 7 C 0.044 3.956 8 O -0.223 6.223 9 C 0.355 3.645 10 F -0.154 7.154 11 F -0.151 7.151 12 C 0.294 3.706 13 O -0.381 6.381 14 N -0.333 5.333 15 C 0.037 3.963 16 H 0.099 0.901 17 C -0.157 4.157 18 C -0.131 4.131 19 C -0.062 4.062 20 H 0.152 0.848 21 C 0.145 3.855 22 N -0.267 5.267 23 C 0.034 3.966 24 C -0.344 4.344 25 C 0.309 3.691 26 O -0.476 6.476 27 N -0.252 5.252 28 C -0.143 4.143 29 C -0.163 4.163 30 C -0.155 4.155 31 C -0.076 4.076 32 H 0.236 0.764 33 H 0.148 0.852 34 H -0.208 1.208 35 H -0.230 1.230 36 H 0.171 0.829 37 H 0.161 0.839 38 H 0.263 0.737 39 H 0.104 0.896 40 H 0.118 0.882 41 H 0.095 0.905 42 H 0.102 0.898 43 H 0.214 0.786 44 H 0.175 0.825 45 H 0.270 0.730 46 H 0.085 0.915 47 H 0.098 0.902 48 H 0.115 0.885 49 H 0.076 0.924 50 H 0.161 0.839 51 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 0.173 5.983 0.191 5.989 hybrid contribution 0.170 -0.060 -0.407 0.445 sum 0.343 5.923 -0.216 5.937 Atomic orbital electron populations 1.86579 1.18403 1.80313 1.50223 1.25183 0.83467 1.11622 0.98408 0.94161 0.90387 0.72180 0.76574 1.20421 1.00449 0.95273 0.97844 1.21030 0.95731 1.00334 0.92367 1.21609 1.04862 0.93195 1.01415 1.19232 0.97250 0.92461 0.86669 1.86646 1.64004 1.39416 1.32251 1.21860 0.76708 0.79483 0.86474 1.93193 1.78255 1.55434 1.88493 1.93199 1.50441 1.89849 1.81589 1.19389 0.81007 0.87103 0.83055 1.90866 1.53964 1.17316 1.75973 1.45866 1.48853 1.17408 1.21200 1.21409 0.97687 0.92780 0.84419 0.90085 1.21831 1.04035 0.97761 0.92053 1.21335 0.96034 0.98089 0.97647 1.20712 1.01989 0.95160 0.88296 0.84821 1.23733 0.78925 0.88686 0.94165 1.68389 1.32691 1.19701 1.05940 1.23167 0.95327 0.86091 0.92041 1.22999 0.94484 1.12110 1.04775 1.17660 0.89561 0.79289 0.82554 1.90991 1.21519 1.58372 1.76725 1.44625 1.11974 1.42782 1.25853 1.21497 1.02744 0.97528 0.92541 1.21880 0.97777 0.98984 0.97671 1.20701 0.99332 1.01652 0.93859 1.21046 0.97061 0.93801 0.95726 0.76428 0.85237 1.20796 1.23002 0.82869 0.83905 0.73718 0.89592 0.88200 0.90475 0.89758 0.78593 0.82485 0.73048 0.91517 0.90177 0.88543 0.92443 0.83860 0.83347 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.57 12.77 -148.98 -1.90 -2.47 16 2 C -0.08 0.17 2.82 71.24 0.20 0.37 16 3 Si 0.76 -2.53 29.78 68.60 2.04 -0.49 16 4 C -0.14 0.11 5.39 -19.85 -0.11 0.01 16 5 C -0.08 0.10 8.66 22.26 0.19 0.29 16 6 C -0.19 -0.28 8.26 22.37 0.18 -0.09 16 7 C 0.09 0.40 6.48 22.50 0.15 0.55 16 8 O -0.31 -2.03 9.60 -73.38 -0.70 -2.74 16 9 C 0.43 0.67 2.05 71.24 0.15 0.81 16 10 F -0.17 -0.01 15.29 44.97 0.69 0.67 16 11 F -0.17 0.11 15.29 44.97 0.69 0.79 16 12 C 0.52 0.54 7.31 87.66 0.64 1.18 16 13 O -0.51 -4.46 16.16 16.00 0.26 -4.20 16 14 N -0.68 5.01 5.08 -442.53 -2.25 2.76 16 15 C 0.14 -1.21 2.46 45.00 0.11 -1.10 16 16 H 0.08 -0.31 7.58 -2.39 -0.02 -0.33 16 17 C -0.12 1.64 5.39 30.59 0.16 1.81 16 18 C -0.09 1.08 4.67 30.60 0.14 1.22 16 19 C -0.04 0.49 2.48 -11.54 -0.03 0.47 16 20 H 0.13 -2.33 8.14 -2.39 -0.02 -2.35 16 21 C 0.41 -2.31 6.73 138.18 0.93 -1.38 16 22 N -0.54 1.56 9.11 -187.56 -1.71 -0.15 16 23 C 0.17 -0.45 11.20 83.96 0.94 0.49 16 24 C -0.32 -0.70 10.07 22.48 0.23 -0.48 16 25 C 0.51 3.18 7.75 84.89 0.66 3.84 16 26 O -0.59 -9.40 17.97 -5.25 -0.09 -9.49 16 27 N -0.61 1.70 5.25 -310.69 -1.63 0.07 16 28 C -0.10 1.03 5.19 30.59 0.16 1.19 16 29 C -0.12 1.17 5.49 30.60 0.17 1.34 16 30 C -0.14 -0.39 9.99 22.37 0.22 -0.17 16 31 C -0.06 -0.03 9.60 22.26 0.21 0.19 16 32 H 0.39 -1.65 8.70 -74.05 -0.64 -2.29 16 33 H 0.13 -0.53 7.96 -2.39 -0.02 -0.55 16 34 H -0.28 -0.10 7.10 99.48 0.71 0.61 16 35 H -0.30 -1.39 7.11 99.48 0.71 -0.68 16 36 H 0.15 -0.92 4.87 -2.91 -0.01 -0.93 16 37 H 0.14 -0.11 5.10 -2.91 -0.01 -0.12 16 38 H 0.42 -5.59 8.60 -92.71 -0.80 -6.39 16 39 H 0.09 -1.16 8.14 -2.39 -0.02 -1.18 16 40 H 0.10 -1.79 8.14 -2.39 -0.02 -1.81 16 41 H 0.08 -0.63 7.76 -2.39 -0.02 -0.65 16 42 H 0.08 -0.99 8.14 -2.39 -0.02 -1.01 16 43 H 0.20 -1.70 8.06 -2.91 -0.02 -1.72 16 44 H 0.16 0.20 8.06 -2.91 -0.02 0.17 16 45 H 0.43 -3.24 8.78 -92.71 -0.81 -4.05 16 46 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 47 H 0.08 -0.85 8.14 -2.39 -0.02 -0.87 16 48 H 0.10 -1.29 8.14 -2.39 -0.02 -1.31 16 49 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 50 H 0.14 0.18 8.06 -2.91 -0.02 0.16 16 51 H 0.15 -0.28 8.06 -2.91 -0.02 -0.30 16 Total: 0.00 -30.51 429.23 -0.47 -30.98 By element: Atomic # 1 Polarization: -25.11 SS G_CDS: -1.18 Total: -26.28 kcal Atomic # 6 Polarization: 5.24 SS G_CDS: 5.31 Total: 10.55 kcal Atomic # 7 Polarization: 8.27 SS G_CDS: -5.59 Total: 2.68 kcal Atomic # 8 Polarization: -16.46 SS G_CDS: -2.44 Total: -18.91 kcal Atomic # 9 Polarization: 0.09 SS G_CDS: 1.38 Total: 1.47 kcal Atomic # 14 Polarization: -2.53 SS G_CDS: 2.04 Total: -0.49 kcal Total: -30.51 -0.47 -30.98 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_4549640.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.266 kcal (2) G-P(sol) polarization free energy of solvation -30.508 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -166.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.475 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.983 kcal (6) G-S(sol) free energy of system = (1) + (5) -167.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds