Wall clock time and date at job start Sat Mar 6 2021 19:59:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86299 * 109.47439 * 2 1 4 4 C 1.50700 * 109.47164 * 119.99960 * 2 1 3 5 5 C 1.38243 * 119.97403 * 244.99720 * 4 2 1 6 6 C 1.38286 * 120.11234 * 180.02562 * 5 4 2 7 7 C 1.38127 * 120.05825 * 359.96503 * 6 5 4 8 8 C 1.38751 * 119.94055 * 0.02562 * 7 6 5 9 9 O 1.35898 * 120.05634 * 180.02562 * 8 7 6 10 10 C 1.42902 * 116.99943 * 359.97438 * 9 8 7 11 11 C 1.50700 * 109.47407 * 180.02562 * 10 9 8 12 12 O 1.21287 * 119.99794 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99912 * 180.02562 * 11 10 9 14 14 C 1.46498 * 119.99525 * 179.97438 * 13 11 10 15 15 H 1.09000 * 109.47528 * 34.99951 * 14 13 11 16 16 C 1.53001 * 109.46770 * 155.00118 * 14 13 11 17 17 C 1.53001 * 109.46966 * 180.02562 * 16 14 13 18 18 C 1.53003 * 109.47048 * 299.99577 * 17 16 14 19 19 H 1.08997 * 109.47218 * 300.00024 * 18 17 16 20 20 C 1.50700 * 109.46998 * 180.02562 * 18 17 16 21 21 N 1.30639 * 119.25520 * 334.97888 * 20 18 17 22 22 C 1.33520 * 121.50739 * 180.02562 * 21 20 18 23 23 C 1.36203 * 119.90771 * 359.97438 * 22 21 20 24 24 C 1.41016 * 118.59494 * 0.02562 * 23 22 21 25 25 O 1.21982 * 120.71234 * 180.02562 * 24 23 22 26 26 N 1.34745 * 119.25514 * 155.00546 * 20 18 17 27 27 C 1.53001 * 109.46892 * 60.00377 * 18 17 16 28 28 C 1.52995 * 109.47469 * 274.99923 * 14 13 11 29 29 C 1.38167 * 119.97203 * 65.25291 * 4 2 1 30 30 H 0.96704 * 113.99826 * 300.00406 * 1 2 3 31 31 H 1.09001 * 109.47307 * 239.99612 * 2 1 3 32 32 H 1.48501 * 110.00349 * 178.67934 * 3 2 1 33 33 H 1.48500 * 110.00085 * 300.00037 * 3 2 1 34 34 H 1.07998 * 119.94385 * 0.02562 * 5 4 2 35 35 H 1.08001 * 119.97266 * 179.97438 * 6 5 4 36 36 H 1.07995 * 120.02984 * 179.97438 * 7 6 5 37 37 H 1.09004 * 109.47097 * 60.00545 * 10 9 8 38 38 H 1.08996 * 109.47185 * 300.00701 * 10 9 8 39 39 H 0.96994 * 120.00222 * 359.97438 * 13 11 10 40 40 H 1.08997 * 109.47477 * 60.00113 * 16 14 13 41 41 H 1.08999 * 109.47155 * 299.99522 * 16 14 13 42 42 H 1.09007 * 109.47345 * 180.02562 * 17 16 14 43 43 H 1.08995 * 109.47730 * 60.00103 * 17 16 14 44 44 H 1.08000 * 120.04867 * 180.02562 * 22 21 20 45 45 H 1.08000 * 120.70268 * 179.97438 * 23 22 21 46 46 H 0.97003 * 120.03642 * 0.24732 * 26 20 18 47 47 H 1.08995 * 109.46812 * 60.00132 * 27 18 17 48 48 H 1.09003 * 109.46903 * 179.97438 * 27 18 17 49 49 H 1.09005 * 109.47352 * 300.00080 * 28 14 13 50 50 H 1.08995 * 109.47346 * 60.00012 * 28 14 13 51 51 H 1.08006 * 120.02681 * 0.02562 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6387 -0.0117 2.1909 6 6 3.1015 -0.6608 3.3209 7 6 2.8572 -2.0094 3.4929 8 6 2.1472 -2.7129 2.5305 9 8 1.9051 -4.0396 2.6976 10 6 2.4114 -4.6466 3.8881 11 6 2.0493 -6.1094 3.8993 12 8 1.4192 -6.5852 2.9787 13 7 2.4247 -6.8886 4.9329 14 6 2.0722 -8.3105 4.9441 15 1 2.1007 -8.6999 3.9264 16 6 3.0725 -9.0771 5.8117 17 6 2.7048 -10.5622 5.8228 18 6 1.2963 -10.7345 6.3951 19 1 1.2675 -10.3455 7.4128 20 6 0.9343 -12.1974 6.4066 21 7 1.5165 -13.0058 5.5615 22 6 1.2295 -14.3095 5.5322 23 6 0.3113 -14.8223 6.3977 24 6 -0.3172 -13.9499 7.3100 25 8 -1.1450 -14.3679 8.1024 26 7 0.0171 -12.6419 7.2880 27 6 0.2960 -9.9680 5.5275 28 6 0.6639 -8.4824 5.5166 29 6 1.6890 -2.0606 1.3952 30 1 -0.3933 0.4418 0.7651 31 1 1.7923 -0.5139 -0.8899 32 1 3.5346 1.7702 0.0322 33 1 1.5616 2.4679 -1.2085 34 1 2.8303 1.0429 2.0586 35 1 3.6543 -0.1129 4.0696 36 1 3.2191 -2.5160 4.3753 37 1 1.9753 -4.1573 4.7591 38 1 3.4958 -4.5408 3.9170 39 1 2.9283 -6.5080 5.6694 40 1 3.0440 -8.6878 6.8293 41 1 4.0758 -8.9547 5.4037 42 1 3.4171 -11.1083 6.4413 43 1 2.7336 -10.9514 4.8051 44 1 1.7254 -14.9566 4.8239 45 1 0.0691 -15.8747 6.3849 46 1 -0.4050 -12.0222 7.9035 47 1 0.3248 -10.3571 4.5098 48 1 -0.7075 -10.0911 5.9349 49 1 0.6353 -8.0930 6.5343 50 1 -0.0487 -7.9363 4.8986 51 1 1.1402 -2.6071 0.6424 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_4860298.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:59:38 Heat of formation + Delta-G solvation = -72.466048 kcal Electronic energy + Delta-G solvation = -34059.892615 eV Core-core repulsion = 29312.361815 eV Total energy + Delta-G solvation = -4747.530800 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.172 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.88807 -41.64495 -40.94466 -39.73911 -38.94669 -38.34484 -37.22790 -35.92834 -35.19758 -32.78446 -32.51334 -32.10305 -31.70890 -30.56810 -28.92615 -26.83692 -25.84836 -25.32469 -24.00069 -23.72757 -23.19358 -22.31406 -21.64289 -21.03699 -19.77992 -19.36797 -19.14431 -18.54776 -17.93072 -17.75653 -17.52921 -17.30806 -17.10792 -17.00782 -16.80970 -16.18676 -16.09195 -15.80955 -15.61291 -15.54023 -15.35686 -15.13218 -15.03105 -14.72608 -14.47448 -14.22654 -14.15153 -14.07491 -13.98467 -13.69159 -13.54303 -13.34354 -13.01171 -12.72586 -12.60027 -12.55084 -12.40769 -12.22597 -12.08237 -11.98732 -11.85074 -11.70176 -11.55094 -11.22658 -11.14143 -10.92464 -10.49010 -10.26908 -9.98218 -9.58495 -9.31531 -5.04559 -0.49265 0.15272 0.35345 0.76528 1.23322 1.38999 1.41875 1.54242 1.63118 1.96556 2.45332 2.52934 2.62001 2.65377 3.20224 3.32305 3.42424 3.46267 3.47367 3.57946 3.60353 3.69029 3.72208 3.81096 3.82853 3.92153 3.94129 3.95971 4.05691 4.10902 4.13948 4.20345 4.22514 4.31361 4.36864 4.48677 4.49311 4.53416 4.57838 4.74031 4.79103 4.82401 4.87700 4.91851 4.94180 5.03414 5.14743 5.18115 5.27887 5.29896 5.38963 5.39634 5.41219 5.59933 6.17250 6.31916 6.56455 6.67249 6.77794 7.02117 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.071 4.071 3 Si 0.692 3.308 4 C -0.080 4.080 5 C -0.153 4.153 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.129 3.871 9 O -0.288 6.288 10 C 0.040 3.960 11 C 0.516 3.484 12 O -0.509 6.509 13 N -0.725 5.725 14 C 0.145 3.855 15 H 0.095 0.905 16 C -0.128 4.128 17 C -0.096 4.096 18 C -0.046 4.046 19 H 0.101 0.899 20 C 0.403 3.597 21 N -0.533 5.533 22 C 0.156 3.844 23 C -0.292 4.292 24 C 0.519 3.481 25 O -0.537 6.537 26 N -0.627 5.627 27 C -0.109 4.109 28 C -0.128 4.128 29 C -0.120 4.120 30 H 0.379 0.621 31 H 0.116 0.884 32 H -0.257 1.257 33 H -0.254 1.254 34 H 0.130 0.870 35 H 0.132 0.868 36 H 0.130 0.870 37 H 0.095 0.905 38 H 0.094 0.906 39 H 0.402 0.598 40 H 0.071 0.929 41 H 0.079 0.921 42 H 0.076 0.924 43 H 0.090 0.910 44 H 0.171 0.829 45 H 0.157 0.843 46 H 0.417 0.583 47 H 0.080 0.920 48 H 0.071 0.929 49 H 0.070 0.930 50 H 0.077 0.923 51 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.345 5.485 5.360 9.348 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.181 4.181 3 Si 0.593 3.407 4 C -0.080 4.080 5 C -0.170 4.170 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.084 3.916 9 O -0.201 6.201 10 C -0.039 4.039 11 C 0.301 3.699 12 O -0.382 6.382 13 N -0.379 5.379 14 C 0.041 3.959 15 H 0.113 0.887 16 C -0.166 4.166 17 C -0.134 4.134 18 C -0.067 4.067 19 H 0.119 0.881 20 C 0.138 3.862 21 N -0.256 5.256 22 C 0.018 3.982 23 C -0.317 4.317 24 C 0.318 3.682 25 O -0.414 6.414 26 N -0.266 5.266 27 C -0.148 4.148 28 C -0.166 4.166 29 C -0.139 4.139 30 H 0.227 0.773 31 H 0.133 0.867 32 H -0.182 1.182 33 H -0.179 1.179 34 H 0.147 0.853 35 H 0.149 0.851 36 H 0.148 0.852 37 H 0.113 0.887 38 H 0.112 0.888 39 H 0.236 0.764 40 H 0.090 0.910 41 H 0.097 0.903 42 H 0.095 0.905 43 H 0.109 0.891 44 H 0.188 0.812 45 H 0.175 0.825 46 H 0.256 0.744 47 H 0.099 0.901 48 H 0.090 0.910 49 H 0.089 0.911 50 H 0.096 0.904 51 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 5.443 4.961 3.367 8.098 hybrid contribution -0.258 -0.647 1.336 1.506 sum 5.184 4.314 4.703 8.222 Atomic orbital electron populations 1.86531 1.16853 1.81708 1.49185 1.25135 0.85438 1.10262 0.97306 0.94706 0.81018 0.77754 0.87200 1.20162 0.97741 0.93585 0.96524 1.20927 1.01413 0.99569 0.95115 1.20911 0.97556 0.93620 0.97003 1.21290 1.04717 0.96070 1.00411 1.19041 0.95386 0.82448 0.94763 1.86176 1.73711 1.20101 1.40065 1.22473 1.00664 0.91957 0.88795 1.20040 0.79877 0.87477 0.82528 1.90800 1.37787 1.74577 1.35081 1.45879 1.58547 1.10096 1.23345 1.21078 0.93945 0.79395 1.01519 0.88698 1.21855 0.99242 0.95212 1.00256 1.21372 0.93147 0.95098 1.03812 1.20558 0.98428 0.85316 1.02355 0.88070 1.23186 0.82969 0.96913 0.83181 1.68290 1.28914 1.04861 1.23551 1.22763 0.90912 0.90549 0.93984 1.22980 1.04416 1.02813 1.01498 1.17360 0.83871 0.81123 0.85846 1.91031 1.34410 1.75025 1.40976 1.44771 1.36127 1.12479 1.33179 1.21573 0.97654 0.94702 1.00880 1.21921 0.97055 0.95618 1.02041 1.20285 1.02859 0.93659 0.97107 0.77332 0.86713 1.18214 1.17923 0.85314 0.85056 0.85237 0.88744 0.88793 0.76360 0.90986 0.90275 0.90506 0.89147 0.81218 0.82497 0.74380 0.90082 0.90987 0.91140 0.90433 0.84651 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.35 12.84 -35.23 -0.45 -0.80 16 2 C -0.07 0.00 2.80 36.01 0.10 0.10 16 3 Si 0.69 -0.82 29.80 -169.99 -5.07 -5.89 16 4 C -0.08 -0.03 5.35 -104.65 -0.56 -0.59 16 5 C -0.15 0.15 8.67 -39.56 -0.34 -0.20 16 6 C -0.07 0.11 10.04 -39.60 -0.40 -0.29 16 7 C -0.21 0.21 9.04 -39.43 -0.36 -0.15 16 8 C 0.13 0.18 6.69 -39.22 -0.26 -0.08 16 9 O -0.29 -0.67 9.67 -39.33 -0.38 -1.05 16 10 C 0.04 -0.08 5.22 36.01 0.19 0.11 16 11 C 0.52 -0.01 7.87 -10.99 -0.09 -0.09 16 12 O -0.51 -2.61 16.16 -14.36 -0.23 -2.84 16 13 N -0.73 2.61 5.08 -53.81 -0.27 2.34 16 14 C 0.14 -0.46 2.45 -67.93 -0.17 -0.63 16 15 H 0.09 -0.07 7.58 -51.93 -0.39 -0.46 16 16 C -0.13 0.66 5.39 -26.73 -0.14 0.52 16 17 C -0.10 0.40 4.67 -26.73 -0.12 0.28 16 18 C -0.05 0.20 2.48 -91.77 -0.23 -0.03 16 19 H 0.10 -0.64 8.14 -51.93 -0.42 -1.06 16 20 C 0.40 -0.70 6.73 -155.57 -1.05 -1.75 16 21 N -0.53 0.24 9.11 -10.63 -0.10 0.14 16 22 C 0.16 -0.09 11.20 -17.55 -0.20 -0.29 16 23 C -0.29 -0.31 10.07 -39.26 -0.40 -0.71 16 24 C 0.52 1.53 7.75 -15.10 -0.12 1.42 16 25 O -0.54 -3.84 17.97 4.93 0.09 -3.75 16 26 N -0.63 0.50 5.25 -12.27 -0.06 0.43 16 27 C -0.11 0.39 5.19 -26.71 -0.14 0.26 16 28 C -0.13 0.43 5.50 -26.71 -0.15 0.28 16 29 C -0.12 -0.24 9.63 -39.43 -0.38 -0.62 16 30 H 0.38 -1.28 8.70 45.56 0.40 -0.88 16 31 H 0.12 0.07 7.96 -51.93 -0.41 -0.35 16 32 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 33 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 34 H 0.13 -0.38 4.90 -52.49 -0.26 -0.64 16 35 H 0.13 -0.50 8.06 -52.49 -0.42 -0.93 16 36 H 0.13 -0.48 6.30 -52.49 -0.33 -0.81 16 37 H 0.09 -0.43 7.66 -51.93 -0.40 -0.83 16 38 H 0.09 -0.41 7.66 -51.93 -0.40 -0.81 16 39 H 0.40 -2.74 8.60 -40.82 -0.35 -3.09 16 40 H 0.07 -0.46 8.14 -51.93 -0.42 -0.89 16 41 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 42 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 43 H 0.09 -0.25 7.76 -51.93 -0.40 -0.66 16 44 H 0.17 -0.56 8.06 -52.49 -0.42 -0.98 16 45 H 0.16 0.03 8.06 -52.49 -0.42 -0.39 16 46 H 0.42 -1.27 8.78 -40.82 -0.36 -1.62 16 47 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 48 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 49 H 0.07 -0.33 8.14 -51.93 -0.42 -0.75 16 50 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 51 H 0.14 0.36 8.06 -52.48 -0.42 -0.06 16 LS Contribution 420.09 15.07 6.33 6.33 Total: 0.00 -14.01 420.09 -12.12 -26.13 By element: Atomic # 1 Polarization: -11.39 SS G_CDS: -7.18 Total: -18.56 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -4.80 Total: -2.47 kcal Atomic # 7 Polarization: 3.35 SS G_CDS: -0.43 Total: 2.92 kcal Atomic # 8 Polarization: -7.48 SS G_CDS: -0.98 Total: -8.46 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.07 Total: -5.89 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -14.01 -12.12 -26.13 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_4860298.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.336 kcal (2) G-P(sol) polarization free energy of solvation -14.006 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.342 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.124 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.130 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.466 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds