Wall clock time and date at job start Sat Mar 6 2021 19:59:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35988 * 116.99773 * 2 1 4 4 C 1.38678 * 119.99926 * 180.27611 * 3 2 1 5 5 C 1.38150 * 119.99964 * 180.27742 * 4 3 2 6 6 C 1.50703 * 120.00084 * 179.72329 * 5 4 3 7 7 O 1.42896 * 109.47055 * 104.72485 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 344.72377 * 6 5 4 9 9 C 1.38677 * 119.99560 * 359.44519 * 5 4 3 10 10 O 1.35989 * 119.99613 * 180.25628 * 9 5 4 11 11 C 1.42896 * 116.99919 * 180.02562 * 10 9 5 12 12 C 1.50706 * 109.47060 * 180.02562 * 11 10 9 13 13 O 1.21274 * 120.00097 * 0.02562 * 12 11 10 14 14 N 1.34779 * 119.99548 * 179.97438 * 12 11 10 15 15 C 1.46503 * 119.99373 * 179.97438 * 14 12 11 16 16 H 1.08998 * 109.47015 * 35.00544 * 15 14 12 17 17 C 1.53007 * 109.46561 * 154.99888 * 15 14 12 18 18 C 1.52996 * 109.46794 * 179.97438 * 17 15 14 19 19 C 1.53006 * 109.47477 * 300.00374 * 18 17 15 20 20 H 1.08996 * 109.46835 * 300.00262 * 19 18 17 21 21 C 1.50699 * 109.46910 * 179.97438 * 19 18 17 22 22 N 1.30632 * 119.25789 * 334.72725 * 21 19 18 23 23 C 1.33527 * 121.50484 * 179.75783 * 22 21 19 24 24 C 1.36196 * 119.90787 * 0.51199 * 23 22 21 25 25 C 1.41019 * 118.59364 * 359.75495 * 24 23 22 26 26 O 1.21988 * 120.70785 * 180.02562 * 25 24 23 27 27 N 1.34747 * 119.25013 * 155.00014 * 21 19 18 28 28 C 1.52995 * 109.46965 * 60.00031 * 19 18 17 29 29 C 1.52998 * 109.47377 * 275.00246 * 15 14 12 30 30 C 1.38717 * 120.00450 * 0.27962 * 9 5 4 31 31 C 1.38108 * 119.99625 * 359.97438 * 30 9 5 32 32 H 1.09001 * 109.47206 * 299.99894 * 1 2 3 33 33 H 1.09005 * 109.46930 * 59.99961 * 1 2 3 34 34 H 1.08999 * 109.46944 * 179.97438 * 1 2 3 35 35 H 1.08006 * 120.00358 * 0.02562 * 4 3 2 36 36 H 1.09002 * 109.47152 * 224.72293 * 6 5 4 37 37 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 38 38 H 1.48497 * 110.00028 * 58.68223 * 8 6 5 39 39 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 40 40 H 1.08998 * 109.47165 * 299.99774 * 11 10 9 41 41 H 1.08996 * 109.47470 * 60.00147 * 11 10 9 42 42 H 0.96994 * 120.00704 * 0.02562 * 14 12 11 43 43 H 1.08993 * 109.47479 * 300.00059 * 17 15 14 44 44 H 1.08998 * 109.46921 * 60.00598 * 17 15 14 45 45 H 1.09002 * 109.47562 * 60.00660 * 18 17 15 46 46 H 1.08998 * 109.47385 * 180.02562 * 18 17 15 47 47 H 1.08005 * 120.04179 * 180.26899 * 23 22 21 48 48 H 1.08003 * 120.69899 * 179.72752 * 24 23 22 49 49 H 0.97007 * 120.04352 * 0.02562 * 27 21 19 50 50 H 1.09005 * 109.47525 * 59.99991 * 28 19 18 51 51 H 1.08996 * 109.47475 * 180.02562 * 28 19 18 52 52 H 1.09005 * 109.47026 * 299.99850 * 29 15 14 53 53 H 1.08994 * 109.46891 * 60.00312 * 29 15 14 54 54 H 1.07992 * 119.99906 * 180.02562 * 30 9 5 55 55 H 1.07999 * 119.99710 * 179.97438 * 31 30 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 -0.0058 5 6 4.0584 2.5152 0.0000 6 6 5.5633 2.5941 0.0000 7 8 6.0207 2.9673 -1.3013 8 14 6.2723 0.9323 0.4546 9 6 3.3030 3.6782 0.0000 10 8 3.9204 4.8899 0.0004 11 6 3.0804 6.0459 0.0009 12 6 3.9346 7.2875 0.0007 13 8 5.1436 7.1918 -0.0003 14 7 3.3549 8.5042 0.0006 15 6 4.1853 9.7112 0.0010 16 1 5.0849 9.5334 -0.5882 17 6 3.3974 10.8724 -0.6089 18 6 4.2644 12.1330 -0.6080 19 6 4.6561 12.4816 0.8294 20 1 3.7563 12.6590 1.4183 21 6 5.5106 13.7229 0.8301 22 7 6.1986 14.0251 -0.2384 23 6 6.9663 15.1164 -0.2886 24 6 7.0518 15.9370 0.7951 25 6 6.3133 15.6081 1.9506 26 8 6.3611 16.3160 2.9429 27 7 5.5519 14.4931 1.9350 28 6 5.4439 11.3204 1.4392 29 6 4.5776 10.0600 1.4381 30 6 1.9177 3.6056 0.0000 31 6 1.2908 2.3750 -0.0005 32 1 -0.3634 0.5138 0.8900 33 1 -0.3633 0.5139 -0.8900 34 1 -0.3633 -1.0277 -0.0005 35 1 4.0195 0.3785 -0.0107 36 1 5.8881 3.3388 0.7267 37 1 5.7675 2.3483 -1.9998 38 1 5.8110 -0.0978 -0.5104 39 1 7.7559 0.9967 0.4576 40 1 2.4511 6.0382 -0.8890 41 1 2.4512 6.0375 0.8909 42 1 2.3880 8.5808 0.0010 43 1 3.1180 10.6239 -1.6327 44 1 2.4978 11.0502 -0.0197 45 1 5.1643 11.9556 -1.1969 46 1 3.7030 12.9604 -1.0420 47 1 7.5219 15.3459 -1.1859 48 1 7.6723 16.8206 0.7701 49 1 5.0358 14.2466 2.7185 50 1 6.3438 11.1429 0.8502 51 1 5.7226 11.5685 2.4633 52 1 3.6779 10.2378 2.0273 53 1 5.1388 9.2327 1.8724 54 1 1.3296 4.5113 -0.0004 55 1 0.2123 2.3185 -0.0001 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_4974302.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:59:41 Heat of formation + Delta-G solvation = -108.397005 kcal Electronic energy + Delta-G solvation = -39098.918188 eV Core-core repulsion = 33875.609494 eV Total energy + Delta-G solvation = -5223.308694 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 416.187 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -42.90584 -41.77257 -41.06417 -40.03246 -39.46651 -38.55153 -38.17166 -36.95147 -35.86706 -35.16825 -32.85884 -32.64689 -31.81078 -31.16534 -30.38992 -28.87086 -27.90761 -26.63002 -25.82682 -25.33477 -23.78184 -23.70049 -22.64146 -22.40654 -21.54321 -20.83388 -19.78057 -19.63634 -19.17761 -18.76830 -18.43977 -17.83971 -17.71746 -17.42251 -17.27664 -17.13311 -17.02790 -16.61118 -16.14595 -16.06075 -15.99025 -15.66693 -15.60191 -15.54481 -15.25996 -15.14084 -14.94879 -14.69594 -14.44395 -14.32007 -14.08335 -14.01419 -13.95030 -13.54307 -13.44553 -13.37401 -13.15738 -12.99528 -12.51332 -12.47362 -12.43149 -12.33887 -12.11734 -12.03962 -11.86293 -11.74589 -11.60067 -11.39700 -11.39217 -11.31545 -11.09712 -10.88873 -10.55888 -10.11478 -10.09358 -9.67835 -8.77125 -4.96205 -0.46463 0.08285 0.38827 0.67010 1.26928 1.51781 1.52910 1.55129 1.58257 1.90991 2.36846 2.49220 2.57186 2.64467 2.79253 3.40173 3.42819 3.53119 3.60964 3.64760 3.70792 3.71361 3.78979 3.98078 4.00168 4.10903 4.12752 4.16585 4.17003 4.18973 4.27273 4.29149 4.36250 4.40438 4.44776 4.45211 4.49288 4.49770 4.52630 4.66323 4.71671 4.80109 4.83975 4.87689 5.00577 5.02016 5.08161 5.16893 5.17650 5.22948 5.24628 5.32008 5.34355 5.41572 5.45823 5.47124 5.56811 6.23244 6.45266 6.51509 6.56028 6.65962 6.70179 7.21989 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.337 6.337 3 C 0.087 3.913 4 C -0.126 4.126 5 C -0.119 4.119 6 C -0.075 4.075 7 O -0.544 6.544 8 Si 0.772 3.228 9 C 0.102 3.898 10 O -0.310 6.310 11 C 0.034 3.966 12 C 0.512 3.488 13 O -0.570 6.570 14 N -0.705 5.705 15 C 0.143 3.857 16 H 0.060 0.940 17 C -0.116 4.116 18 C -0.094 4.094 19 C -0.039 4.039 20 H 0.135 0.865 21 C 0.409 3.591 22 N -0.546 5.546 23 C 0.172 3.828 24 C -0.319 4.319 25 C 0.509 3.491 26 O -0.592 6.592 27 N -0.615 5.615 28 C -0.105 4.105 29 C -0.120 4.120 30 C -0.163 4.163 31 C -0.157 4.157 32 H 0.069 0.931 33 H 0.065 0.935 34 H 0.112 0.888 35 H 0.144 0.856 36 H 0.107 0.893 37 H 0.382 0.618 38 H -0.273 1.273 39 H -0.301 1.301 40 H 0.120 0.880 41 H 0.126 0.874 42 H 0.422 0.578 43 H 0.081 0.919 44 H 0.100 0.900 45 H 0.070 0.930 46 H 0.083 0.917 47 H 0.197 0.803 48 H 0.159 0.841 49 H 0.429 0.571 50 H 0.058 0.942 51 H 0.077 0.923 52 H 0.096 0.904 53 H 0.048 0.952 54 H 0.167 0.833 55 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.264 -2.847 -0.912 13.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.251 6.251 3 C 0.042 3.958 4 C -0.145 4.145 5 C -0.120 4.120 6 C -0.183 4.183 7 O -0.351 6.351 8 Si 0.676 3.324 9 C 0.057 3.943 10 O -0.223 6.223 11 C -0.044 4.044 12 C 0.298 3.702 13 O -0.448 6.448 14 N -0.359 5.359 15 C 0.039 3.961 16 H 0.078 0.922 17 C -0.153 4.153 18 C -0.133 4.133 19 C -0.059 4.059 20 H 0.153 0.847 21 C 0.145 3.855 22 N -0.269 5.269 23 C 0.033 3.967 24 C -0.343 4.343 25 C 0.310 3.690 26 O -0.475 6.475 27 N -0.252 5.252 28 C -0.144 4.144 29 C -0.159 4.159 30 C -0.181 4.181 31 C -0.176 4.176 32 H 0.088 0.912 33 H 0.084 0.916 34 H 0.131 0.869 35 H 0.161 0.839 36 H 0.125 0.875 37 H 0.231 0.769 38 H -0.200 1.200 39 H -0.230 1.230 40 H 0.137 0.863 41 H 0.144 0.856 42 H 0.260 0.740 43 H 0.100 0.900 44 H 0.118 0.882 45 H 0.089 0.911 46 H 0.101 0.899 47 H 0.214 0.786 48 H 0.176 0.824 49 H 0.270 0.730 50 H 0.077 0.923 51 H 0.096 0.904 52 H 0.114 0.886 53 H 0.067 0.933 54 H 0.184 0.816 55 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -11.180 -3.069 -1.080 11.644 hybrid contribution -0.367 1.025 -0.173 1.102 sum -11.547 -2.044 -1.253 11.794 Atomic orbital electron populations 1.23344 0.76404 1.05504 1.02424 1.86081 1.23400 1.26558 1.89063 1.18957 0.91976 0.85234 0.99658 1.20273 0.92592 0.97067 1.04522 1.19354 0.96019 0.90609 1.05983 1.25086 0.92085 1.13342 0.87773 1.86659 1.78677 1.52618 1.17181 0.94042 0.76553 0.72599 0.89167 1.18827 0.91494 0.84555 0.99429 1.86213 1.35215 1.11887 1.88999 1.22748 0.92758 0.82324 1.06563 1.20532 0.88305 0.85630 0.75776 1.90786 1.16852 1.87350 1.49809 1.45727 1.11463 1.03928 1.74804 1.21048 0.94415 0.83976 0.96677 0.92154 1.21781 0.98919 0.92057 1.02581 1.21340 1.00841 0.97706 0.93366 1.20684 0.96944 0.86949 1.01317 0.84703 1.23743 0.90004 0.90937 0.80857 1.68388 1.13402 1.20791 1.24331 1.23172 0.89313 0.86056 0.98179 1.23004 1.09441 1.07541 0.94301 1.17652 0.80823 0.80558 0.90001 1.90991 1.67523 1.51812 1.37204 1.44624 1.40682 1.22480 1.17433 1.21490 0.98422 0.93074 1.01443 1.21821 1.00850 0.96469 0.96752 1.21384 0.92097 0.99976 1.04642 1.21402 1.01522 0.90898 1.03766 0.91220 0.91621 0.86940 0.83857 0.87535 0.76948 1.19975 1.22951 0.86264 0.85644 0.74035 0.90016 0.88169 0.91079 0.89859 0.78608 0.82367 0.73033 0.92274 0.90429 0.88592 0.93279 0.81593 0.82225 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.34 -0.52 10.50 -93.41 -0.98 -1.50 16 3 C 0.09 0.13 6.69 22.49 0.15 0.28 16 4 C -0.13 -0.37 8.59 22.35 0.19 -0.18 16 5 C -0.12 -0.52 5.27 -19.78 -0.10 -0.63 16 6 C -0.07 -0.46 2.37 71.24 0.17 -0.30 16 7 O -0.54 -5.33 12.88 -148.98 -1.92 -7.25 16 8 Si 0.77 2.04 30.26 68.60 2.08 4.11 16 9 C 0.10 0.31 6.66 22.49 0.15 0.46 16 10 O -0.31 -1.76 9.00 -74.39 -0.67 -2.43 16 11 C 0.03 -0.15 5.22 71.24 0.37 0.22 16 12 C 0.51 0.51 7.87 87.66 0.69 1.20 16 13 O -0.57 -7.78 16.16 16.02 0.26 -7.52 16 14 N -0.71 5.41 5.08 -442.52 -2.25 3.17 16 15 C 0.14 -0.87 2.46 44.99 0.11 -0.76 16 16 H 0.06 0.09 7.58 -2.39 -0.02 0.07 16 17 C -0.12 1.38 5.39 30.60 0.16 1.54 16 18 C -0.09 0.87 4.67 30.60 0.14 1.02 16 19 C -0.04 0.38 2.48 -11.54 -0.03 0.35 16 20 H 0.14 -2.13 8.14 -2.39 -0.02 -2.15 16 21 C 0.41 -1.53 6.73 138.18 0.93 -0.60 16 22 N -0.55 0.46 9.12 -187.56 -1.71 -1.25 16 23 C 0.17 -0.17 11.20 83.96 0.94 0.77 16 24 C -0.32 -1.09 10.07 22.48 0.23 -0.86 16 25 C 0.51 3.78 7.75 84.88 0.66 4.44 16 26 O -0.59 -9.91 17.97 -5.28 -0.09 -10.01 16 27 N -0.61 0.81 5.25 -310.69 -1.63 -0.82 16 28 C -0.11 0.73 5.18 30.58 0.16 0.89 16 29 C -0.12 0.80 5.49 30.58 0.17 0.97 16 30 C -0.16 0.53 9.03 22.35 0.20 0.74 16 31 C -0.16 0.47 9.03 22.35 0.20 0.67 16 32 H 0.07 -0.64 7.66 -2.39 -0.02 -0.65 16 33 H 0.07 -0.56 7.66 -2.38 -0.02 -0.58 16 34 H 0.11 -1.00 8.14 -2.39 -0.02 -1.02 16 35 H 0.14 0.26 4.86 -2.91 -0.01 0.25 16 36 H 0.11 0.89 7.82 -2.39 -0.02 0.88 16 37 H 0.38 1.07 8.70 -74.05 -0.64 0.43 16 38 H -0.27 -1.32 6.67 99.48 0.66 -0.65 16 39 H -0.30 -3.02 7.11 99.48 0.71 -2.32 16 40 H 0.12 -1.23 7.66 -2.39 -0.02 -1.25 16 41 H 0.13 -1.44 7.66 -2.39 -0.02 -1.46 16 42 H 0.42 -6.70 8.60 -92.71 -0.80 -7.50 16 43 H 0.08 -0.94 8.14 -2.39 -0.02 -0.96 16 44 H 0.10 -1.68 8.14 -2.39 -0.02 -1.70 16 45 H 0.07 -0.34 7.75 -2.39 -0.02 -0.36 16 46 H 0.08 -0.82 8.14 -2.39 -0.02 -0.84 16 47 H 0.20 -1.40 8.06 -2.91 -0.02 -1.42 16 48 H 0.16 0.35 8.06 -2.91 -0.02 0.33 16 49 H 0.43 -2.68 8.78 -92.70 -0.81 -3.50 16 50 H 0.06 -0.13 8.14 -2.38 -0.02 -0.15 16 51 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 52 H 0.10 -1.11 8.14 -2.38 -0.02 -1.13 16 53 H 0.05 0.00 8.14 -2.39 -0.02 -0.02 16 54 H 0.17 -1.81 6.29 -2.91 -0.02 -1.83 16 55 H 0.16 -1.39 6.29 -2.91 -0.02 -1.41 16 Total: 0.00 -40.25 448.68 -1.60 -41.85 By element: Atomic # 1 Polarization: -28.29 SS G_CDS: -1.29 Total: -29.57 kcal Atomic # 6 Polarization: 4.62 SS G_CDS: 6.61 Total: 11.22 kcal Atomic # 7 Polarization: 6.69 SS G_CDS: -5.59 Total: 1.10 kcal Atomic # 8 Polarization: -25.31 SS G_CDS: -3.40 Total: -28.71 kcal Atomic # 14 Polarization: 2.04 SS G_CDS: 2.08 Total: 4.11 kcal Total: -40.25 -1.60 -41.85 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_4974302.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.545 kcal (2) G-P(sol) polarization free energy of solvation -40.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.799 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.852 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.397 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds