Wall clock time and date at job start Sat Mar 6 2021 19:59:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38241 * 119.93588 * 300.00279 * 4 2 1 6 6 C 1.38188 * 120.06477 * 179.97438 * 5 4 2 7 7 C 1.38675 * 119.95835 * 359.97438 * 6 5 4 8 8 O 1.35922 * 120.06093 * 180.02562 * 7 6 5 9 9 C 1.42905 * 116.99481 * 359.97438 * 8 7 6 10 10 C 1.50701 * 109.46601 * 179.97438 * 9 8 7 11 11 O 1.21283 * 120.00410 * 0.02562 * 10 9 8 12 12 N 1.34774 * 120.00029 * 179.97438 * 10 9 8 13 13 C 1.46498 * 120.00352 * 180.02562 * 12 10 9 14 14 H 1.09001 * 109.47247 * 35.00300 * 13 12 10 15 15 C 1.52998 * 109.47499 * 155.00400 * 13 12 10 16 16 C 1.52997 * 109.47298 * 179.97438 * 15 13 12 17 17 C 1.52995 * 109.47652 * 300.00258 * 16 15 13 18 18 H 1.09000 * 109.47221 * 300.00155 * 17 16 15 19 19 C 1.50697 * 109.47366 * 179.97438 * 17 16 15 20 20 N 1.30634 * 119.25375 * 335.00127 * 19 17 16 21 21 C 1.33526 * 121.50379 * 179.97438 * 20 19 17 22 22 C 1.36197 * 119.91282 * 359.97438 * 21 20 19 23 23 C 1.41024 * 118.59093 * 0.02562 * 22 21 20 24 24 O 1.21983 * 120.70780 * 179.97438 * 23 22 21 25 25 N 1.34749 * 119.25234 * 154.72756 * 19 17 16 26 26 C 1.52998 * 109.46979 * 59.99547 * 17 16 15 27 27 C 1.52993 * 109.47573 * 300.00452 * 26 17 16 28 28 C 1.38833 * 119.88054 * 359.97438 * 7 6 5 29 29 Br 1.89101 * 120.03438 * 180.02562 * 28 7 6 30 30 C 1.38192 * 119.93097 * 359.77056 * 28 7 6 31 31 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 32 32 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 33 33 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 34 34 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 35 35 H 1.07999 * 119.96876 * 359.97438 * 5 4 2 36 36 H 1.08002 * 120.01923 * 179.97438 * 6 5 4 37 37 H 1.08995 * 109.47276 * 299.99794 * 9 8 7 38 38 H 1.08997 * 109.47181 * 60.00535 * 9 8 7 39 39 H 0.97006 * 119.99911 * 0.02562 * 12 10 9 40 40 H 1.08998 * 109.46932 * 300.00327 * 15 13 12 41 41 H 1.09000 * 109.46648 * 60.00174 * 15 13 12 42 42 H 1.09000 * 109.46934 * 60.00588 * 16 15 13 43 43 H 1.08997 * 109.47200 * 179.97438 * 16 15 13 44 44 H 1.08006 * 120.04442 * 180.02562 * 21 20 19 45 45 H 1.07993 * 120.70627 * 180.02562 * 22 21 20 46 46 H 0.97000 * 120.04085 * 0.02562 * 25 19 17 47 47 H 1.09001 * 109.46952 * 60.00711 * 26 17 16 48 48 H 1.09007 * 109.47071 * 179.97438 * 26 17 16 49 49 H 1.09011 * 109.47088 * 300.00143 * 27 26 17 50 50 H 1.09004 * 109.47852 * 180.02562 * 27 26 17 51 51 H 1.07996 * 119.98346 * 180.22673 * 30 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5965 -2.0339 -1.4480 6 6 2.0552 -2.6878 -2.5757 7 6 2.8518 -2.0153 -3.4902 8 8 3.3037 -2.6562 -4.6003 9 6 2.9198 -4.0233 -4.7615 10 6 3.5090 -4.5631 -6.0392 11 8 4.1909 -3.8478 -6.7423 12 7 3.2790 -5.8410 -6.4002 13 6 3.8522 -6.3660 -7.6420 14 1 4.8322 -5.9185 -7.8075 15 6 3.9970 -7.8853 -7.5346 16 6 4.5951 -8.4336 -8.8317 17 6 3.6730 -8.0908 -10.0035 18 1 2.6930 -8.5382 -9.8376 19 6 4.2624 -8.6303 -11.2811 20 7 5.5524 -8.8210 -11.3584 21 6 6.1221 -9.2974 -12.4681 22 6 5.3531 -9.5962 -13.5518 23 6 3.9605 -9.3904 -13.4686 24 8 3.2355 -9.6445 -14.4161 25 7 3.4462 -8.9102 -12.3161 26 6 3.5282 -6.5714 -10.1108 27 6 2.9301 -6.0231 -8.8138 28 6 3.1859 -0.6858 -3.2703 29 35 4.2712 0.2356 -4.5149 30 6 2.7202 -0.0350 -2.1437 31 1 -0.3932 0.4418 0.7651 32 1 1.7924 -0.5139 0.8900 33 1 1.5615 2.4679 -1.2085 34 1 1.5881 2.4585 1.2242 35 1 0.9758 -2.5574 -0.7359 36 1 1.7935 -3.7219 -2.7446 37 1 3.2874 -4.6059 -3.9169 38 1 1.8329 -4.0927 -4.8053 39 1 2.7339 -6.4133 -5.8377 40 1 4.6536 -8.1296 -6.6996 41 1 3.0170 -8.3328 -7.3692 42 1 5.5751 -7.9861 -8.9976 43 1 4.6986 -9.5159 -8.7551 44 1 7.1911 -9.4464 -12.5060 45 1 5.8003 -9.9826 -14.4557 46 1 2.4908 -8.7639 -12.2344 47 1 4.5081 -6.1239 -10.2767 48 1 2.8716 -6.3271 -10.9459 49 1 1.9501 -6.4707 -8.6479 50 1 2.8265 -4.9407 -8.8904 51 1 2.9766 1.0002 -1.9737 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13456076_6201210.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 19:59:58 Heat of formation + Delta-G solvation = -68.123647 kcal Electronic energy + Delta-G solvation = -36275.531558 eV Core-core repulsion = 31188.371056 eV Total energy + Delta-G solvation = -5087.160502 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 464.083 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.90028 -41.66824 -40.89133 -39.69911 -39.03753 -38.39397 -37.38192 -35.86017 -35.16121 -33.52266 -32.68804 -32.19943 -31.79260 -30.84153 -30.21613 -28.96432 -26.37335 -25.78284 -25.31187 -24.02656 -23.71730 -22.77188 -22.17911 -21.53684 -20.82842 -19.77541 -19.51521 -19.17657 -18.60405 -18.31973 -17.80446 -17.45893 -17.31201 -17.10888 -17.01581 -16.72504 -16.07547 -15.98547 -15.77884 -15.63444 -15.55337 -15.23702 -15.11043 -14.94400 -14.50209 -14.45153 -14.21217 -14.07529 -13.99359 -13.97230 -13.85965 -13.68981 -13.40183 -13.14982 -12.53335 -12.50078 -12.34689 -12.27241 -12.13774 -12.08443 -12.03216 -11.91542 -11.77083 -11.59076 -11.38679 -11.30668 -11.19783 -11.09123 -10.89094 -10.50245 -10.08597 -9.97909 -9.67362 -9.27891 -4.95715 -0.45905 -0.01058 0.10013 0.64472 0.67435 1.27573 1.45247 1.52484 1.55318 1.56550 1.92726 2.39279 2.49443 2.54157 2.78900 3.31707 3.40528 3.52215 3.61203 3.65942 3.70305 3.72350 3.80803 3.87856 3.99652 4.07915 4.09501 4.10386 4.17618 4.19185 4.29899 4.35459 4.37620 4.41152 4.42154 4.49972 4.53448 4.66956 4.67974 4.81692 4.85067 4.88234 5.02846 5.05498 5.09170 5.18023 5.24463 5.32730 5.33151 5.34967 5.42697 5.47058 5.48112 5.58235 6.09113 6.53603 6.60369 6.66219 6.70588 7.22509 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.064 4.064 3 Si 0.728 3.272 4 C -0.115 4.115 5 C -0.034 4.034 6 C -0.194 4.194 7 C 0.150 3.850 8 O -0.304 6.304 9 C 0.031 3.969 10 C 0.512 3.488 11 O -0.567 6.567 12 N -0.705 5.705 13 C 0.144 3.856 14 H 0.063 0.937 15 C -0.116 4.116 16 C -0.094 4.094 17 C -0.039 4.039 18 H 0.134 0.866 19 C 0.409 3.591 20 N -0.545 5.545 21 C 0.173 3.827 22 C -0.319 4.319 23 C 0.509 3.491 24 O -0.593 6.593 25 N -0.615 5.615 26 C -0.105 4.105 27 C -0.121 4.121 28 C -0.140 4.140 29 Br -0.049 7.049 30 C -0.058 4.058 31 H 0.397 0.603 32 H 0.109 0.891 33 H -0.304 1.304 34 H -0.278 1.278 35 H 0.158 0.842 36 H 0.176 0.824 37 H 0.131 0.869 38 H 0.127 0.873 39 H 0.422 0.578 40 H 0.083 0.917 41 H 0.098 0.902 42 H 0.072 0.928 43 H 0.083 0.917 44 H 0.198 0.802 45 H 0.158 0.842 46 H 0.429 0.571 47 H 0.060 0.940 48 H 0.075 0.925 49 H 0.094 0.906 50 H 0.048 0.952 51 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.135 -6.072 11.624 13.287 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.174 4.174 3 Si 0.635 3.365 4 C -0.116 4.116 5 C -0.052 4.052 6 C -0.213 4.213 7 C 0.102 3.898 8 O -0.216 6.216 9 C -0.047 4.047 10 C 0.298 3.702 11 O -0.445 6.445 12 N -0.359 5.359 13 C 0.040 3.960 14 H 0.081 0.919 15 C -0.153 4.153 16 C -0.132 4.132 17 C -0.059 4.059 18 H 0.152 0.848 19 C 0.144 3.856 20 N -0.268 5.268 21 C 0.033 3.967 22 C -0.343 4.343 23 C 0.309 3.691 24 O -0.476 6.476 25 N -0.253 5.253 26 C -0.144 4.144 27 C -0.160 4.160 28 C -0.220 4.220 29 Br 0.036 6.964 30 C -0.077 4.077 31 H 0.248 0.752 32 H 0.127 0.873 33 H -0.232 1.232 34 H -0.205 1.205 35 H 0.175 0.825 36 H 0.194 0.806 37 H 0.149 0.851 38 H 0.145 0.855 39 H 0.260 0.740 40 H 0.102 0.898 41 H 0.117 0.883 42 H 0.090 0.910 43 H 0.101 0.899 44 H 0.214 0.786 45 H 0.176 0.824 46 H 0.269 0.731 47 H 0.078 0.922 48 H 0.094 0.906 49 H 0.112 0.888 50 H 0.067 0.933 51 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -0.888 -4.707 9.854 10.956 hybrid contribution -2.249 -0.219 -0.352 2.287 sum -3.138 -4.926 9.501 11.153 Atomic orbital electron populations 1.86528 1.18120 1.80475 1.51329 1.24625 0.84201 1.10151 0.98453 0.94468 0.91117 0.74141 0.76818 1.19345 1.00318 0.95300 0.96617 1.21227 0.94847 0.93011 0.96143 1.21615 1.01622 1.02695 0.95368 1.18775 0.93572 0.90556 0.86910 1.86247 1.70259 1.25834 1.39274 1.22880 1.02884 0.81325 0.97581 1.20456 0.80307 0.82693 0.86761 1.90797 1.39815 1.58722 1.55174 1.45721 1.53885 1.11120 1.25166 1.21043 0.96764 0.95251 0.82969 0.91872 1.21781 1.03796 0.91518 0.98244 1.21338 0.98567 1.02213 0.91123 1.20685 1.01484 0.96306 0.87440 0.84826 1.23756 0.86867 0.85736 0.89206 1.68391 1.08201 1.22645 1.27568 1.23177 1.02318 0.85322 0.85855 1.23003 0.92050 1.14699 1.04581 1.17664 0.90966 0.78591 0.81841 1.90989 1.63505 1.55478 1.37608 1.44633 1.14337 1.53045 1.13241 1.21495 1.02115 0.92281 0.98538 1.21836 1.00144 1.00663 0.93332 1.21085 1.07813 0.94111 0.99035 1.96761 1.66416 1.75360 1.57835 1.20855 0.96090 0.99573 0.91189 0.75217 0.87314 1.23180 1.20474 0.82481 0.80644 0.85126 0.85512 0.73990 0.89816 0.88304 0.90963 0.89888 0.78558 0.82388 0.73072 0.92152 0.90604 0.88756 0.93320 0.83974 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.80 12.74 -148.98 -1.90 -1.10 16 2 C -0.06 0.22 2.81 71.24 0.20 0.42 16 3 Si 0.73 -1.26 29.78 68.60 2.04 0.78 16 4 C -0.11 0.04 5.42 -19.85 -0.11 -0.06 16 5 C -0.03 0.12 9.60 22.26 0.21 0.33 16 6 C -0.19 0.85 9.04 22.36 0.20 1.05 16 7 C 0.15 0.35 6.68 22.52 0.15 0.50 16 8 O -0.30 -1.21 9.01 -73.63 -0.66 -1.87 16 9 C 0.03 -0.19 5.22 71.24 0.37 0.18 16 10 C 0.51 -0.39 7.87 87.66 0.69 0.30 16 11 O -0.57 -6.60 16.16 16.00 0.26 -6.34 16 12 N -0.70 6.33 5.08 -442.53 -2.25 4.09 16 13 C 0.14 -1.03 2.46 44.99 0.11 -0.92 16 14 H 0.06 0.00 7.58 -2.39 -0.02 -0.02 16 15 C -0.12 1.48 5.39 30.59 0.16 1.65 16 16 C -0.09 0.94 4.67 30.59 0.14 1.08 16 17 C -0.04 0.40 2.48 -11.54 -0.03 0.37 16 18 H 0.13 -2.13 8.14 -2.39 -0.02 -2.15 16 19 C 0.41 -1.65 6.73 138.18 0.93 -0.72 16 20 N -0.54 0.70 9.11 -187.56 -1.71 -1.01 16 21 C 0.17 -0.23 11.20 83.96 0.94 0.71 16 22 C -0.32 -1.03 10.07 22.48 0.23 -0.80 16 23 C 0.51 3.73 7.75 84.89 0.66 4.39 16 24 O -0.59 -9.92 17.97 -5.26 -0.09 -10.01 16 25 N -0.62 0.88 5.25 -310.69 -1.63 -0.75 16 26 C -0.11 0.76 5.18 30.59 0.16 0.92 16 27 C -0.12 0.86 5.49 30.59 0.17 1.03 16 28 C -0.14 -0.77 6.24 22.40 0.14 -0.63 16 29 Br -0.05 -0.43 33.16 -20.37 -0.68 -1.10 16 30 C -0.06 -0.15 8.40 22.27 0.19 0.03 16 31 H 0.40 -3.59 8.74 -74.05 -0.65 -4.24 16 32 H 0.11 -0.96 7.96 -2.38 -0.02 -0.98 16 33 H -0.30 -2.13 7.11 99.48 0.71 -1.42 16 34 H -0.28 -0.47 7.11 99.48 0.71 0.24 16 35 H 0.16 -1.22 8.06 -2.91 -0.02 -1.25 16 36 H 0.18 -2.22 6.30 -2.91 -0.02 -2.23 16 37 H 0.13 -1.74 7.66 -2.39 -0.02 -1.76 16 38 H 0.13 -1.61 7.66 -2.39 -0.02 -1.63 16 39 H 0.42 -7.23 8.60 -92.70 -0.80 -8.02 16 40 H 0.08 -1.06 8.14 -2.39 -0.02 -1.08 16 41 H 0.10 -1.72 8.14 -2.39 -0.02 -1.74 16 42 H 0.07 -0.41 7.76 -2.39 -0.02 -0.43 16 43 H 0.08 -0.86 8.14 -2.39 -0.02 -0.88 16 44 H 0.20 -1.48 8.06 -2.91 -0.02 -1.51 16 45 H 0.16 0.33 8.06 -2.91 -0.02 0.30 16 46 H 0.43 -2.68 8.78 -92.71 -0.81 -3.49 16 47 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 48 H 0.08 -0.59 8.14 -2.38 -0.02 -0.61 16 49 H 0.09 -1.11 8.14 -2.38 -0.02 -1.13 16 50 H 0.05 -0.02 8.14 -2.39 -0.02 -0.04 16 51 H 0.14 0.16 4.87 -2.91 -0.01 0.14 16 Total: 0.00 -39.29 440.42 -2.29 -41.59 By element: Atomic # 1 Polarization: -32.91 SS G_CDS: -1.20 Total: -34.11 kcal Atomic # 6 Polarization: 4.31 SS G_CDS: 5.52 Total: 9.83 kcal Atomic # 7 Polarization: 7.91 SS G_CDS: -5.59 Total: 2.33 kcal Atomic # 8 Polarization: -16.92 SS G_CDS: -2.40 Total: -19.32 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: 2.04 Total: 0.78 kcal Atomic # 35 Polarization: -0.43 SS G_CDS: -0.68 Total: -1.10 kcal Total: -39.29 -2.29 -41.59 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_6201210.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.535 kcal (2) G-P(sol) polarization free energy of solvation -39.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.830 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.294 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.589 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds