Wall clock time and date at job start Sat Mar 6 2021 20:00:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86304 * 109.47370 * 2 1 4 4 C 1.50698 * 109.47123 * 120.00300 * 2 1 3 5 5 C 1.35456 * 125.56461 * 245.01877 * 4 2 1 6 6 C 1.39836 * 107.86343 * 179.71798 * 5 4 2 7 7 C 1.37867 * 107.08895 * 0.42223 * 6 5 4 8 8 C 1.46674 * 126.23629 * 179.84495 * 7 6 5 9 9 O 1.21693 * 120.00152 * 359.68726 * 8 7 6 10 10 N 1.34778 * 119.99873 * 179.69280 * 8 7 6 11 11 C 1.46507 * 119.99832 * 179.97438 * 10 8 7 12 12 H 1.08996 * 109.47132 * 325.00740 * 11 10 8 13 13 C 1.53004 * 109.46622 * 84.99880 * 11 10 8 14 14 C 1.53005 * 109.46760 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.46909 * 299.99546 * 14 13 11 16 16 H 1.08997 * 109.47344 * 300.00758 * 15 14 13 17 17 C 1.50700 * 109.47408 * 180.02562 * 15 14 13 18 18 N 1.30639 * 119.25571 * 265.03008 * 17 15 14 19 19 C 1.33515 * 121.50561 * 179.97438 * 18 17 15 20 20 C 1.36204 * 119.91119 * 359.70696 * 19 18 17 21 21 C 1.41020 * 118.59033 * 0.55464 * 20 19 18 22 22 O 1.21983 * 120.71127 * 179.72410 * 21 20 19 23 23 N 1.34743 * 119.25231 * 84.99886 * 17 15 14 24 24 C 1.53002 * 109.46932 * 60.00249 * 15 14 13 25 25 C 1.52991 * 109.47321 * 204.99550 * 11 10 8 26 26 N 1.35537 * 125.56763 * 64.99993 * 4 2 1 27 27 H 0.96697 * 113.99683 * 300.00215 * 1 2 3 28 28 H 1.09003 * 109.47435 * 240.00212 * 2 1 3 29 29 H 1.48497 * 109.99888 * 300.00196 * 3 2 1 30 30 H 1.48502 * 109.99645 * 61.32428 * 3 2 1 31 31 H 1.08002 * 126.06417 * 359.97438 * 5 4 2 32 32 H 1.08000 * 126.45602 * 180.26803 * 6 5 4 33 33 H 0.96995 * 120.00438 * 359.97438 * 10 8 7 34 34 H 1.09004 * 109.47284 * 299.99883 * 13 11 10 35 35 H 1.08995 * 109.47400 * 60.00461 * 13 11 10 36 36 H 1.09005 * 109.47070 * 180.02562 * 14 13 11 37 37 H 1.08990 * 109.47385 * 60.00224 * 14 13 11 38 38 H 1.08005 * 120.04456 * 180.02562 * 19 18 17 39 39 H 1.07997 * 120.70573 * 180.30814 * 20 19 18 40 40 H 0.97006 * 120.04088 * 0.05344 * 23 17 15 41 41 H 1.09002 * 109.47101 * 59.99898 * 24 15 14 42 42 H 1.09004 * 109.47177 * 179.97438 * 24 15 14 43 43 H 1.09009 * 109.46931 * 60.00323 * 25 11 10 44 44 H 1.09003 * 109.47684 * 300.00908 * 25 11 10 45 45 H 0.97003 * 125.67169 * 0.03863 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6327 -0.1394 2.2388 6 6 2.9018 -1.1297 3.1886 7 6 2.3530 -2.3032 2.7171 8 6 2.3936 -3.6088 3.3842 9 8 2.9569 -3.7270 4.4564 10 7 1.8072 -4.6777 2.8096 11 6 1.8482 -5.9819 3.4757 12 1 2.7986 -6.0936 3.9975 13 6 0.6997 -6.0769 4.4821 14 6 0.7429 -7.4387 5.1782 15 6 0.6003 -8.5492 4.1354 16 1 -0.3501 -8.4378 3.6135 17 6 0.6423 -9.8906 4.8209 18 7 1.7776 -10.5320 4.8999 19 6 1.8663 -11.7226 5.4975 20 6 0.7571 -12.2910 6.0470 21 6 -0.4697 -11.6014 5.9568 22 8 -1.4880 -12.0770 6.4310 23 7 -0.4920 -10.4009 5.3392 24 6 1.7488 -8.4542 3.1289 25 6 1.7054 -7.0920 2.4326 26 7 1.7548 -2.0251 1.5089 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5138 -0.8900 29 1 1.5615 2.4679 -1.2084 30 1 1.5880 2.4585 1.2243 31 1 2.9276 0.8978 2.3003 32 1 3.4405 -1.0002 4.1157 33 1 1.3579 -4.5835 1.9551 34 1 0.8014 -5.2860 5.2253 35 1 -0.2508 -5.9652 3.9604 36 1 -0.0756 -7.5066 5.8949 37 1 1.6933 -7.5501 5.7000 38 1 2.8172 -12.2321 5.5497 39 1 0.8152 -13.2513 6.5378 40 1 -1.3236 -9.9066 5.2683 41 1 2.6994 -8.5655 3.6507 42 1 1.6476 -9.2456 2.3863 43 1 2.5236 -7.0243 1.7156 44 1 0.7549 -6.9802 1.9108 45 1 1.2853 -2.6637 0.9498 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_6580494.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:00:08 Heat of formation + Delta-G solvation = -23.612691 kcal Electronic energy + Delta-G solvation = -29302.936803 eV Core-core repulsion = 25094.544484 eV Total energy + Delta-G solvation = -4208.392319 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.89066 -42.56532 -40.86561 -39.47558 -38.39937 -37.91843 -35.94068 -35.20390 -32.84044 -32.18044 -32.03066 -31.46379 -30.14931 -27.08167 -25.82063 -25.33508 -23.99660 -23.57953 -22.43901 -21.54611 -21.45538 -20.94698 -19.89651 -19.73561 -19.10234 -18.27703 -17.85074 -17.41370 -17.02257 -16.77288 -16.53351 -16.14814 -15.97171 -15.61363 -15.50842 -15.42323 -15.23376 -15.17542 -14.55983 -14.53427 -14.38473 -14.12885 -14.08837 -13.98950 -13.67442 -13.60935 -13.38079 -12.72248 -12.55213 -12.40469 -12.40198 -12.08103 -11.94877 -11.84956 -11.55101 -11.28217 -11.17739 -11.13593 -10.90728 -10.27501 -10.12128 -9.58383 -9.31932 -5.01879 -0.49174 0.31535 0.76600 1.06340 1.51431 1.53484 1.55263 1.78241 1.91811 2.09657 2.34097 2.52739 2.64501 3.14767 3.21315 3.35679 3.46880 3.48578 3.57912 3.67640 3.76547 3.91861 3.94577 4.05991 4.11634 4.17376 4.20462 4.22774 4.22817 4.36013 4.38603 4.48792 4.53479 4.74723 4.79496 4.82470 4.88013 4.94096 4.95929 5.03385 5.06157 5.15558 5.28916 5.39640 5.41223 5.54836 5.78164 6.13827 6.18117 6.36175 6.67361 6.77827 7.06796 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.061 4.061 3 Si 0.718 3.282 4 C 0.024 3.976 5 C -0.199 4.199 6 C -0.098 4.098 7 C -0.051 4.051 8 C 0.591 3.409 9 O -0.521 6.521 10 N -0.730 5.730 11 C 0.144 3.856 12 H 0.097 0.903 13 C -0.127 4.127 14 C -0.108 4.108 15 C -0.046 4.046 16 H 0.101 0.899 17 C 0.403 3.597 18 N -0.532 5.532 19 C 0.156 3.844 20 C -0.293 4.293 21 C 0.520 3.480 22 O -0.537 6.537 23 N -0.627 5.627 24 C -0.095 4.095 25 C -0.128 4.128 26 N -0.524 5.524 27 H 0.380 0.620 28 H 0.119 0.881 29 H -0.256 1.256 30 H -0.255 1.255 31 H 0.151 0.849 32 H 0.153 0.847 33 H 0.394 0.606 34 H 0.078 0.922 35 H 0.068 0.932 36 H 0.071 0.929 37 H 0.081 0.919 38 H 0.171 0.829 39 H 0.157 0.843 40 H 0.417 0.583 41 H 0.091 0.909 42 H 0.076 0.924 43 H 0.078 0.922 44 H 0.070 0.930 45 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.170 3.231 -5.581 6.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.171 4.171 3 Si 0.617 3.383 4 C -0.094 4.094 5 C -0.224 4.224 6 C -0.124 4.124 7 C -0.165 4.165 8 C 0.379 3.621 9 O -0.397 6.397 10 N -0.381 5.381 11 C 0.040 3.960 12 H 0.115 0.885 13 C -0.166 4.166 14 C -0.148 4.148 15 C -0.067 4.067 16 H 0.119 0.881 17 C 0.138 3.862 18 N -0.256 5.256 19 C 0.018 3.982 20 C -0.317 4.317 21 C 0.318 3.682 22 O -0.415 6.415 23 N -0.266 5.266 24 C -0.134 4.134 25 C -0.166 4.166 26 N -0.120 5.120 27 H 0.229 0.771 28 H 0.137 0.863 29 H -0.180 1.180 30 H -0.179 1.179 31 H 0.168 0.832 32 H 0.171 0.829 33 H 0.227 0.773 34 H 0.096 0.904 35 H 0.087 0.913 36 H 0.090 0.910 37 H 0.100 0.900 38 H 0.188 0.812 39 H 0.175 0.825 40 H 0.256 0.744 41 H 0.109 0.891 42 H 0.095 0.905 43 H 0.097 0.903 44 H 0.088 0.912 45 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 2.633 3.236 -5.323 6.763 hybrid contribution -2.620 -0.853 0.198 2.762 sum 0.013 2.383 -5.126 5.652 Atomic orbital electron populations 1.86597 1.17562 1.80227 1.49692 1.24894 0.84044 1.11859 0.96263 0.94213 0.91426 0.72147 0.80563 1.21087 1.04627 0.84261 0.99456 1.20747 1.06022 1.00362 0.95247 1.21342 1.00848 0.90095 1.00140 1.20474 1.09882 0.95898 0.90212 1.17051 0.78297 0.82149 0.84618 1.90881 1.43798 1.84235 1.20757 1.45963 1.58073 1.09322 1.24709 1.21074 1.00437 0.81038 0.93410 0.88523 1.21913 0.98727 0.97036 0.98920 1.21565 1.03967 0.92495 0.96730 1.20557 1.02450 0.87007 0.96657 0.88139 1.23181 0.81546 0.94359 0.87138 1.68290 1.22280 1.10818 1.24195 1.22765 0.99192 0.89039 0.87202 1.22979 0.92233 1.05370 1.11133 1.17363 0.91293 0.80319 0.79221 1.91031 1.35852 1.66415 1.48176 1.44772 1.12934 1.20662 1.48182 1.21371 0.98585 0.96238 0.97165 1.21869 1.03142 0.93830 0.97806 1.41947 1.43150 1.09317 1.17606 0.77126 0.86285 1.18038 1.17900 0.83176 0.82945 0.77273 0.90372 0.91333 0.91012 0.90018 0.81202 0.82500 0.74386 0.89088 0.90542 0.90313 0.91177 0.74660 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.59 12.88 -35.23 -0.45 0.14 16 2 C -0.06 0.15 3.08 36.00 0.11 0.26 16 3 Si 0.72 -1.97 30.56 -169.99 -5.19 -7.16 16 4 C 0.02 -0.04 6.47 -81.95 -0.53 -0.57 16 5 C -0.20 0.16 9.32 -39.98 -0.37 -0.22 16 6 C -0.10 -0.08 10.65 -39.12 -0.42 -0.50 16 7 C -0.05 -0.01 7.06 -81.98 -0.58 -0.59 16 8 C 0.59 0.63 7.75 -12.85 -0.10 0.53 16 9 O -0.52 -2.54 16.55 5.19 0.09 -2.45 16 10 N -0.73 1.76 5.07 -55.11 -0.28 1.48 16 11 C 0.14 -0.39 2.45 -67.93 -0.17 -0.55 16 12 H 0.10 -0.05 7.58 -51.93 -0.39 -0.44 16 13 C -0.13 0.37 5.49 -26.73 -0.15 0.22 16 14 C -0.11 0.37 5.19 -26.73 -0.14 0.23 16 15 C -0.05 0.19 2.48 -91.77 -0.23 -0.04 16 16 H 0.10 -0.59 8.14 -51.93 -0.42 -1.01 16 17 C 0.40 -0.65 6.73 -155.57 -1.05 -1.70 16 18 N -0.53 0.22 9.12 -10.63 -0.10 0.12 16 19 C 0.16 -0.09 11.20 -17.55 -0.20 -0.29 16 20 C -0.29 -0.33 10.07 -39.26 -0.40 -0.72 16 21 C 0.52 1.58 7.75 -15.09 -0.12 1.46 16 22 O -0.54 -3.91 17.97 4.93 0.09 -3.82 16 23 N -0.63 0.41 5.25 -12.27 -0.06 0.35 16 24 C -0.10 0.38 4.67 -26.71 -0.12 0.25 16 25 C -0.13 0.60 5.39 -26.71 -0.14 0.45 16 26 N -0.52 1.05 5.99 -5.70 -0.03 1.01 16 27 H 0.38 -1.32 8.70 45.56 0.40 -0.93 16 28 H 0.12 -0.42 7.96 -51.93 -0.41 -0.83 16 29 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 30 H -0.25 0.15 7.11 56.52 0.40 0.55 16 31 H 0.15 -0.37 6.19 -52.49 -0.32 -0.69 16 32 H 0.15 0.10 8.06 -52.49 -0.42 -0.32 16 33 H 0.39 -1.96 7.73 -40.82 -0.32 -2.27 16 34 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 35 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 36 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 37 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 38 H 0.17 -0.56 8.06 -52.48 -0.42 -0.99 16 39 H 0.16 0.03 8.06 -52.49 -0.42 -0.39 16 40 H 0.42 -1.19 8.78 -40.82 -0.36 -1.55 16 41 H 0.09 -0.24 7.76 -51.93 -0.40 -0.64 16 42 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 43 H 0.08 -0.35 8.14 -51.92 -0.42 -0.77 16 44 H 0.07 -0.40 8.14 -51.93 -0.42 -0.82 16 45 H 0.42 -1.84 8.19 -40.82 -0.33 -2.17 16 LS Contribution 375.55 15.07 5.66 5.66 Total: 0.00 -11.72 375.55 -10.87 -22.59 By element: Atomic # 1 Polarization: -10.17 SS G_CDS: -5.99 Total: -16.16 kcal Atomic # 6 Polarization: 2.83 SS G_CDS: -4.59 Total: -1.76 kcal Atomic # 7 Polarization: 3.44 SS G_CDS: -0.48 Total: 2.96 kcal Atomic # 8 Polarization: -5.85 SS G_CDS: -0.28 Total: -6.13 kcal Atomic # 14 Polarization: -1.97 SS G_CDS: -5.19 Total: -7.16 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -11.72 -10.87 -22.59 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_6580494.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.020 kcal (2) G-P(sol) polarization free energy of solvation -11.718 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.738 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.875 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.593 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds