Wall clock time and date at job start Sat Mar 6 2021 20:00:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.36773 * 125.80562 * 2 1 4 4 C 1.47261 * 126.93772 * 359.97438 * 3 2 1 5 5 O 1.21625 * 120.00462 * 359.97438 * 4 3 2 6 6 N 1.34783 * 119.99709 * 179.97438 * 4 3 2 7 7 C 1.46500 * 119.99928 * 179.97438 * 6 4 3 8 8 H 1.08999 * 109.47336 * 325.00245 * 7 6 4 9 9 C 1.52999 * 109.47228 * 85.00430 * 7 6 4 10 10 C 1.52993 * 109.47433 * 180.02562 * 9 7 6 11 11 C 1.53002 * 109.46968 * 299.99930 * 10 9 7 12 12 H 1.08999 * 109.46838 * 300.00065 * 11 10 9 13 13 C 1.50702 * 109.47281 * 179.97438 * 11 10 9 14 14 N 1.30634 * 119.25130 * 264.99868 * 13 11 10 15 15 C 1.33524 * 121.50344 * 179.97438 * 14 13 11 16 16 C 1.36196 * 119.90913 * 0.02562 * 15 14 13 17 17 C 1.41022 * 118.59563 * 359.97428 * 16 15 14 18 18 O 1.21978 * 120.71082 * 180.02562 * 17 16 15 19 19 N 1.34742 * 119.25283 * 84.97815 * 13 11 10 20 20 C 1.53003 * 109.47307 * 59.99662 * 11 10 9 21 21 C 1.52993 * 109.47228 * 300.00446 * 20 11 10 22 22 C 1.46682 * 106.11663 * 180.24784 * 3 2 1 23 23 C 1.34483 * 106.33454 * 359.62303 * 22 3 2 24 24 C 1.50708 * 125.57456 * 180.15952 * 23 22 3 25 25 O 1.42899 * 109.47046 * 300.28066 * 24 23 22 26 26 Si 1.86297 * 109.47214 * 180.27816 * 24 23 22 27 27 N 1.34660 * 125.80184 * 180.02562 * 2 1 3 28 28 H 1.09001 * 109.47168 * 89.99685 * 1 2 3 29 29 H 1.08997 * 109.47467 * 210.00210 * 1 2 3 30 30 H 1.09007 * 109.47002 * 330.00210 * 1 2 3 31 31 H 0.96999 * 119.99849 * 0.02562 * 6 4 3 32 32 H 1.09006 * 109.46463 * 300.00190 * 9 7 6 33 33 H 1.08999 * 109.47113 * 59.99678 * 9 7 6 34 34 H 1.08998 * 109.47595 * 179.97438 * 10 9 7 35 35 H 1.09007 * 109.47239 * 59.99330 * 10 9 7 36 36 H 1.08000 * 120.04638 * 179.72271 * 15 14 13 37 37 H 1.08001 * 120.70726 * 179.97438 * 16 15 14 38 38 H 0.97001 * 120.04680 * 0.02562 * 19 13 11 39 39 H 1.09004 * 109.46522 * 60.00088 * 20 11 10 40 40 H 1.08994 * 109.47443 * 179.97438 * 20 11 10 41 41 H 1.08998 * 109.47441 * 179.97438 * 21 20 11 42 42 H 1.08999 * 109.47176 * 299.99756 * 21 20 11 43 43 H 1.08000 * 126.83328 * 179.75079 * 22 3 2 44 44 H 1.08999 * 109.46797 * 60.27613 * 24 23 22 45 45 H 0.96705 * 114.00183 * 180.02562 * 25 24 23 46 46 H 1.48505 * 109.99797 * 60.00248 * 26 24 23 47 47 H 1.48494 * 109.99974 * 181.32026 * 26 24 23 48 48 H 0.97001 * 124.85180 * 359.96079 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8702 2.5156 -0.0005 5 8 0.6840 2.7839 -0.0015 6 7 2.7851 3.5054 0.0001 7 6 2.3505 4.9044 -0.0010 8 1 1.4395 5.0015 -0.5915 9 6 2.0777 5.3549 1.4355 10 6 1.6233 6.8157 1.4343 11 6 2.7207 7.6907 0.8253 12 1 3.6319 7.5940 1.4156 13 6 2.2729 9.1297 0.8235 14 7 1.7123 9.6224 -0.2486 15 6 1.2984 10.8909 -0.2993 16 6 1.4582 11.7012 0.7837 17 6 2.0633 11.1694 1.9412 18 8 2.2250 11.8606 2.9331 19 7 2.4595 9.8786 1.9280 20 6 2.9937 7.2403 -0.6113 21 6 3.4480 5.7794 -0.6101 22 6 3.6881 0.6151 -0.0061 23 6 3.6095 -0.7275 -0.0007 24 6 4.7819 -1.6744 -0.0006 25 8 5.5759 -1.4497 -1.1672 26 14 4.1614 -3.4310 -0.0005 27 7 2.2947 -1.0922 -0.0005 28 1 -0.3633 0.0001 -1.0277 29 1 -0.3634 -0.8899 0.5138 30 1 -0.3633 0.8901 0.5138 31 1 3.7312 3.2913 0.0005 32 1 1.2955 4.7317 1.8692 33 1 2.9888 5.2578 2.0259 34 1 1.4285 7.1365 2.4577 35 1 0.7121 6.9124 0.8439 36 1 0.8419 11.2752 -1.1995 37 1 1.1284 12.7293 0.7567 38 1 2.8782 9.4912 2.7125 39 1 2.0824 7.3369 -1.2016 40 1 3.7752 7.8639 -1.0453 41 1 3.6420 5.4584 -1.6335 42 1 4.3592 5.6827 -0.0197 43 1 4.5890 1.2108 -0.0115 44 1 5.3873 -1.5029 0.8895 45 1 6.3496 -2.0260 -1.2335 46 1 3.3345 -3.6776 -1.2092 47 1 5.3076 -4.3745 0.0318 48 1 1.9733 -2.0074 -0.0004 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13456076_9865296.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:00:37 Heat of formation + Delta-G solvation = -25.768569 kcal Electronic energy + Delta-G solvation = -31436.318040 eV Core-core repulsion = 27072.294616 eV Total energy + Delta-G solvation = -4364.023424 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.81531 -42.44505 -40.66854 -39.30128 -38.28467 -37.95441 -35.76373 -35.00915 -32.89537 -32.76081 -31.99914 -31.80693 -30.03408 -28.99980 -26.16602 -25.50271 -25.06271 -23.82977 -23.50163 -22.21262 -21.42437 -21.18957 -20.27309 -19.69515 -19.04526 -18.80044 -18.13397 -17.78864 -17.35470 -16.92473 -16.87227 -16.29445 -16.07866 -15.85639 -15.54153 -15.49835 -15.31959 -15.19474 -14.89002 -14.57740 -14.48421 -14.33516 -14.15433 -13.98157 -13.96831 -13.65286 -13.47202 -13.44534 -13.24007 -12.97403 -12.56268 -12.53490 -12.38562 -12.25055 -12.18781 -11.99665 -11.68412 -11.37637 -11.15544 -11.06012 -10.83345 -10.55049 -9.99122 -9.77023 -9.52061 -9.10567 -5.29264 -0.42398 0.80570 0.83084 0.94461 1.25548 1.30055 1.60808 1.65982 1.97004 2.40580 2.59559 2.69836 2.74251 3.22730 3.32395 3.51497 3.59859 3.60833 3.65976 3.86149 3.87473 4.04258 4.06474 4.13547 4.20091 4.23743 4.26354 4.28455 4.29832 4.37817 4.51480 4.54584 4.58011 4.69246 4.71925 4.78000 4.86195 4.92292 4.95431 5.01734 5.04229 5.11474 5.22115 5.25617 5.34626 5.45943 5.47595 5.65487 5.74685 5.89717 6.21689 6.36732 6.73761 6.74553 6.83881 7.51468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.125 3.875 3 C -0.242 4.242 4 C 0.595 3.405 5 O -0.547 6.547 6 N -0.725 5.725 7 C 0.146 3.854 8 H 0.092 0.908 9 C -0.126 4.126 10 C -0.108 4.108 11 C -0.046 4.046 12 H 0.101 0.899 13 C 0.404 3.596 14 N -0.533 5.533 15 C 0.157 3.843 16 C -0.294 4.294 17 C 0.520 3.480 18 O -0.538 6.538 19 N -0.627 5.627 20 C -0.095 4.095 21 C -0.128 4.128 22 C -0.126 4.126 23 C 0.017 3.983 24 C -0.041 4.041 25 O -0.531 6.531 26 Si 0.664 3.336 27 N -0.544 5.544 28 H 0.081 0.919 29 H 0.067 0.933 30 H 0.104 0.896 31 H 0.400 0.600 32 H 0.077 0.923 33 H 0.068 0.932 34 H 0.069 0.931 35 H 0.080 0.920 36 H 0.170 0.830 37 H 0.157 0.843 38 H 0.418 0.582 39 H 0.089 0.911 40 H 0.074 0.926 41 H 0.077 0.923 42 H 0.070 0.930 43 H 0.146 0.854 44 H 0.088 0.912 45 H 0.383 0.617 46 H -0.250 1.250 47 H -0.249 1.249 48 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.038 -7.097 0.177 7.722 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.007 3.993 3 C -0.252 4.252 4 C 0.385 3.615 5 O -0.426 6.426 6 N -0.376 5.376 7 C 0.041 3.959 8 H 0.110 0.890 9 C -0.165 4.165 10 C -0.147 4.147 11 C -0.067 4.067 12 H 0.119 0.881 13 C 0.139 3.861 14 N -0.256 5.256 15 C 0.018 3.982 16 C -0.319 4.319 17 C 0.318 3.682 18 O -0.416 6.416 19 N -0.265 5.265 20 C -0.134 4.134 21 C -0.166 4.166 22 C -0.151 4.151 23 C -0.091 4.091 24 C -0.152 4.152 25 O -0.338 6.338 26 Si 0.563 3.437 27 N -0.144 5.144 28 H 0.099 0.901 29 H 0.086 0.914 30 H 0.123 0.877 31 H 0.234 0.766 32 H 0.095 0.905 33 H 0.086 0.914 34 H 0.088 0.912 35 H 0.098 0.902 36 H 0.187 0.813 37 H 0.174 0.826 38 H 0.256 0.744 39 H 0.108 0.892 40 H 0.093 0.907 41 H 0.096 0.904 42 H 0.088 0.912 43 H 0.163 0.837 44 H 0.106 0.894 45 H 0.232 0.768 46 H -0.174 1.174 47 H -0.173 1.173 48 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges 1.566 -7.119 -0.600 7.314 hybrid contribution 1.873 0.021 0.373 1.910 sum 3.439 -7.098 -0.227 7.891 Atomic orbital electron populations 1.20654 0.86481 1.04624 1.03876 1.20390 0.93761 0.85157 1.00028 1.20091 0.92949 0.92090 1.20028 1.17294 0.85256 0.83982 0.74973 1.90752 1.16559 1.84340 1.50984 1.45811 1.09805 1.05548 1.76394 1.20977 0.98727 0.79782 0.96397 0.88951 1.21907 1.02371 0.95021 0.97187 1.21565 0.97762 0.94184 1.01219 1.20571 0.99944 0.85332 1.00821 0.88122 1.23233 0.87295 0.94020 0.81552 1.68303 1.18590 1.15244 1.23480 1.22763 0.89674 0.87729 0.97985 1.22966 1.10546 1.04234 0.94142 1.17357 0.80195 0.80437 0.90188 1.91025 1.57388 1.57702 1.35482 1.44773 1.51721 1.13338 1.16707 1.21363 1.03670 0.94674 0.93644 1.21853 0.98081 0.94609 1.02105 1.21738 0.95661 0.92496 1.05169 1.19088 0.83263 0.94353 1.12376 1.23970 0.92721 1.07721 0.90791 1.86607 1.41669 1.62454 1.43089 0.95703 0.85700 0.74389 0.87863 1.41641 1.05376 1.08552 1.58803 0.90089 0.91394 0.87714 0.76608 0.90450 0.91357 0.91189 0.90174 0.81262 0.82561 0.74374 0.89231 0.90716 0.90395 0.91176 0.83659 0.89404 0.76817 1.17433 1.17328 0.74740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.03 9.88 36.00 0.36 0.39 16 2 C 0.13 0.11 7.17 -81.89 -0.59 -0.47 16 3 C -0.24 -0.44 6.29 -103.35 -0.65 -1.09 16 4 C 0.60 1.45 7.77 -12.59 -0.10 1.36 16 5 O -0.55 -2.85 14.48 5.26 0.08 -2.77 16 6 N -0.73 0.43 5.07 -54.93 -0.28 0.15 16 7 C 0.15 -0.20 2.45 -67.93 -0.17 -0.37 16 8 H 0.09 0.07 7.58 -51.93 -0.39 -0.32 16 9 C -0.13 0.25 5.49 -26.74 -0.15 0.11 16 10 C -0.11 0.29 5.19 -26.73 -0.14 0.15 16 11 C -0.05 0.15 2.48 -91.77 -0.23 -0.07 16 12 H 0.10 -0.52 8.14 -51.93 -0.42 -0.94 16 13 C 0.40 -0.42 6.73 -155.58 -1.05 -1.47 16 14 N -0.53 -0.09 9.11 -10.64 -0.10 -0.18 16 15 C 0.16 -0.02 11.20 -17.55 -0.20 -0.22 16 16 C -0.29 -0.45 10.07 -39.26 -0.40 -0.84 16 17 C 0.52 1.78 7.75 -15.09 -0.12 1.67 16 18 O -0.54 -4.09 17.97 4.94 0.09 -4.00 16 19 N -0.63 0.13 5.25 -12.27 -0.06 0.07 16 20 C -0.09 0.28 4.67 -26.73 -0.12 0.16 16 21 C -0.13 0.43 5.39 -26.73 -0.14 0.28 16 22 C -0.13 -0.07 10.43 -37.50 -0.39 -0.46 16 23 C 0.02 0.00 6.14 -81.86 -0.50 -0.50 16 24 C -0.04 0.08 2.97 36.01 0.11 0.19 16 25 O -0.53 0.31 12.84 -35.23 -0.45 -0.14 16 26 Si 0.66 -1.89 30.94 -169.99 -5.26 -7.15 16 27 N -0.54 0.39 5.41 -5.42 -0.03 0.36 16 28 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 30 H 0.10 0.14 6.47 -51.92 -0.34 -0.19 16 31 H 0.40 -1.01 7.73 -40.82 -0.32 -1.32 16 32 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 34 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 35 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.17 -0.48 8.06 -52.49 -0.42 -0.91 16 37 H 0.16 0.09 8.06 -52.49 -0.42 -0.33 16 38 H 0.42 -1.01 8.78 -40.82 -0.36 -1.37 16 39 H 0.09 -0.15 7.76 -51.93 -0.40 -0.55 16 40 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 41 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 42 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 43 H 0.15 -0.17 7.70 -52.49 -0.40 -0.57 16 44 H 0.09 -0.33 7.96 -51.93 -0.41 -0.74 16 45 H 0.38 -1.77 8.74 45.56 0.40 -1.37 16 46 H -0.25 -0.08 7.11 56.52 0.40 0.32 16 47 H -0.25 0.17 7.11 56.52 0.40 0.58 16 48 H 0.41 -1.33 6.70 -40.82 -0.27 -1.60 16 LS Contribution 394.32 15.07 5.94 5.94 Total: 0.00 -12.22 394.32 -11.32 -23.54 By element: Atomic # 1 Polarization: -7.85 SS G_CDS: -6.77 Total: -14.62 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: -4.47 Total: -1.20 kcal Atomic # 7 Polarization: 0.86 SS G_CDS: -0.47 Total: 0.39 kcal Atomic # 8 Polarization: -6.62 SS G_CDS: -0.29 Total: -6.91 kcal Atomic # 14 Polarization: -1.89 SS G_CDS: -5.26 Total: -7.15 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -12.22 -11.32 -23.54 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13456076_9865296.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.228 kcal (2) G-P(sol) polarization free energy of solvation -12.225 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.453 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.540 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds